##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545818_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1455943 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.628324048400245 31.0 31.0 33.0 30.0 34.0 2 32.031439417614564 33.0 31.0 34.0 30.0 34.0 3 32.073066734068576 33.0 31.0 34.0 30.0 34.0 4 35.785285550327174 37.0 35.0 37.0 35.0 37.0 5 35.75454190170906 37.0 35.0 37.0 35.0 37.0 6 35.80513797586856 37.0 35.0 37.0 35.0 37.0 7 35.99636936336107 37.0 35.0 37.0 35.0 37.0 8 35.9264188227149 37.0 35.0 37.0 35.0 37.0 9 37.68732361088312 39.0 38.0 39.0 35.0 39.0 10 37.45560506146188 39.0 37.0 39.0 35.0 39.0 11 37.17183845796161 39.0 37.0 39.0 34.0 39.0 12 36.32319603171278 38.0 35.0 39.0 33.0 39.0 13 36.01012127535213 38.0 35.0 39.0 32.0 39.0 14 37.00530240538263 39.0 35.0 41.0 33.0 41.0 15 37.186434496405425 39.0 35.0 41.0 33.0 41.0 16 37.3141627110402 39.0 35.0 41.0 33.0 41.0 17 37.22705284478857 38.0 35.0 41.0 33.0 41.0 18 37.16010448211228 38.0 35.0 41.0 33.0 41.0 19 37.073197920522986 38.0 35.0 41.0 32.0 41.0 20 36.9153057502938 38.0 35.0 41.0 32.0 41.0 21 36.815297714264915 38.0 35.0 41.0 32.0 41.0 22 36.81443779049042 38.0 35.0 41.0 32.0 41.0 23 36.824783662547226 38.0 35.0 41.0 32.0 41.0 24 36.79913980148948 38.0 35.0 41.0 32.0 41.0 25 36.726786694259324 38.0 35.0 41.0 32.0 41.0 26 36.6038814706345 38.0 35.0 41.0 32.0 41.0 27 36.503376849231046 38.0 35.0 41.0 32.0 41.0 28 36.48694282674528 38.0 35.0 41.0 32.0 41.0 29 36.45954614981493 37.0 35.0 41.0 31.0 41.0 30 36.378770322739285 37.0 35.0 40.0 31.0 41.0 31 36.222462005724125 37.0 35.0 40.0 31.0 41.0 32 36.03508447789508 37.0 35.0 40.0 31.0 41.0 33 35.86483399418796 37.0 35.0 40.0 30.0 41.0 34 35.68294431856192 37.0 35.0 40.0 30.0 41.0 35 35.471995126182826 37.0 35.0 40.0 29.0 41.0 36 35.3149354061251 37.0 35.0 40.0 28.0 41.0 37 35.24204931099638 37.0 34.0 40.0 27.0 41.0 38 35.15246475995283 37.0 34.0 40.0 27.0 41.0 39 35.13563855178396 37.0 34.0 40.0 27.0 41.0 40 34.96109188340478 37.0 34.0 40.0 26.0 41.0 41 34.85771077576526 36.0 34.0 40.0 25.0 41.0 42 34.831518129487215 36.0 34.0 40.0 25.0 41.0 43 34.731121341975616 36.0 34.0 40.0 25.0 41.0 44 34.61750631721159 36.0 34.0 40.0 24.0 41.0 45 34.51490408621766 36.0 34.0 40.0 24.0 41.0 46 34.44266842864041 35.0 34.0 40.0 24.0 41.0 47 34.379143276900265 35.0 34.0 40.0 24.0 41.0 48 34.33252881465827 35.0 34.0 40.0 23.0 41.0 49 34.27639749633056 36.0 34.0 40.0 24.0 41.0 50 34.112895903205 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 15.0 13 11.0 14 14.0 15 32.0 16 67.0 17 197.0 18 498.0 19 1034.0 20 1824.0 21 2982.0 22 4654.0 23 6783.0 24 10190.0 25 15219.0 26 21373.0 27 26059.0 28 27903.0 29 29099.0 30 32683.0 31 38768.0 32 48827.0 33 64388.0 34 126327.0 35 259367.0 36 81376.0 37 100284.0 38 166529.0 39 389437.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.37215605281251 23.274468849398637 28.49905525147619 13.854319846312665 2 31.01536255196804 26.634078394552535 29.678909133118538 12.671649920360895 3 28.535389091468556 25.62943741616258 32.712200958416645 13.12297253395222 4 25.167331413386375 27.061567657525053 33.1169558148911 14.654145114197464 5 23.561293264914905 30.483885701569363 31.68036111303808 14.274459920477655 6 20.48857681928482 40.01303622463242 29.13211574903688 10.36627120704588 7 84.27452173608445 4.589946172343285 9.172268419848855 1.9632636717234122 8 85.19378849309348 4.710417921580722 7.925859734893467 2.1699338504323316 9 80.52066598761077 5.476381973744851 9.682453227907962 4.320498810736409 10 50.63082826731541 25.406145707627292 14.143960306138359 9.819065718918942 11 44.17947680644091 19.36813460417063 23.443912296017082 13.008476293371373 12 41.817021682854346 20.488645503292368 25.050293864526292 12.644038949327 13 20.742020807133247 40.3041190486166 25.495640969461032 13.458219174789123 14 14.714037568778448 41.83632188897505 27.944363206526628 15.505277335719875 15 13.127643046465417 23.04211085186714 49.562791949959575 14.267454151707861 16 15.12840818630949 19.007337512526245 45.88057362135743 19.983680679806834 17 15.440302264580414 19.53977593903058 30.348921626739507 34.671000169649496 18 19.887729121263675 23.212790610621433 36.53989201500333 20.359588253111557 19 27.362953082641283 24.832290824572116 26.729892585080595 21.074863507706002 20 28.687180748147423 22.492020635423227 28.403653164993408 20.417145451435943 21 20.299764482538123 28.541295916117594 30.4726902083392 20.68624939300508 22 21.5005669864823 24.500547068120113 26.794112132137045 27.204773813260548 23 17.79918581977454 31.30981089232202 27.508975282686205 23.382028005217236 24 17.889848709736576 23.364650951307848 41.01197643039597 17.733523908559608 25 15.61956752427808 27.964762356768087 36.64037671804459 19.775293400909238 26 16.325982541898963 32.95966943760848 28.802157776781094 21.912190243711464 27 17.452056845632004 33.185433770415464 29.00044850656928 20.362060877383247 28 13.057722726782572 27.712348629032867 40.36421755522023 18.865711088964336 29 15.016453254007883 23.297890095972164 38.51146645163993 23.174190198380018 30 17.06632745924806 31.18391310648837 33.11001873012886 18.63974070413471 31 26.33468480565517 28.209002687605217 25.989272931701308 19.46703957503831 32 27.875541830964533 25.431764842442323 28.34410413045016 18.34858919614298 33 25.886727708433643 27.81317675211186 26.855103530838775 19.44499200861572 34 18.21678458566029 25.999644216840906 30.564864146467276 25.21870705103153 35 18.645372792753562 24.534133547810594 33.160776211706086 23.659717447729754 36 27.376758568158234 26.3201237960552 28.271505134472985 18.03161250131358 37 18.541728625365142 31.957088979444936 30.84523226527412 18.655950129915798 38 18.700732102836444 32.8366563800918 27.05222663249866 21.41038488457309 39 19.45714907795154 31.606594488932604 28.618359372585328 20.31789706053053 40 22.53062104766464 26.268473422379863 26.724672600507027 24.476232929448475 41 16.548381358336144 25.888032704577036 27.984062562888795 29.57952337419803 42 20.187534814206327 26.25686582510442 25.799705070871592 27.75589428981766 43 21.101650270649333 27.40931478773551 27.163219988694614 24.325814952920545 44 18.898610728579346 29.38294974459852 29.339541451828815 22.37889807499332 45 16.498860188894756 36.60878207457298 23.91474116775176 22.97761656878051 46 21.043406232249477 34.041854660518986 26.244227967715766 18.670511139515764 47 20.223250498130767 26.46470363194163 30.035585184310097 23.2764606856175 48 21.326109607312922 24.39051528802982 32.08181913715028 22.20155596750697 49 19.53565489857776 24.0591836356231 33.980519841779525 22.42464162401962 50 18.23320006346402 32.841876364665374 28.36793748106897 20.556986090801633 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 838.0 1 1642.5 2 2447.0 3 9255.5 4 16064.0 5 11706.5 6 7349.0 7 7295.5 8 7242.0 9 7458.5 10 7675.0 11 7457.5 12 7240.0 13 6776.5 14 6313.0 15 5888.0 16 5463.0 17 5294.0 18 5125.0 19 4623.0 20 4121.0 21 4669.0 22 5217.0 23 5610.0 24 6003.0 25 7046.5 26 8090.0 27 10350.5 28 12611.0 29 15694.5 30 18778.0 31 23025.5 32 27273.0 33 29499.5 34 31726.0 35 39694.0 36 47662.0 37 49968.0 38 52274.0 39 66666.0 40 81058.0 41 108226.0 42 135394.0 43 157586.0 44 179778.0 45 172513.0 46 165248.0 47 152132.0 48 139016.0 49 127409.5 50 115803.0 51 104557.0 52 93311.0 53 84446.5 54 75582.0 55 66930.5 56 58279.0 57 50996.5 58 43714.0 59 38767.5 60 33821.0 61 28846.0 62 23871.0 63 18547.5 64 13224.0 65 10368.0 66 7512.0 67 5677.0 68 3842.0 69 3309.5 70 2777.0 71 2262.0 72 1747.0 73 1445.5 74 1144.0 75 882.5 76 621.0 77 490.5 78 360.0 79 265.0 80 170.0 81 129.0 82 88.0 83 61.5 84 35.0 85 24.5 86 14.0 87 10.0 88 6.0 89 7.5 90 9.0 91 7.0 92 5.0 93 3.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1455943.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.520200535274704 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3111046195644 13.8954645760892 2 8.042081162466348 2.8179774937473097 3 2.7051513156682585 1.4218438058631024 4 1.3416092983734675 0.9402105578996938 5 0.856363777057822 0.750183255259916 6 0.5891439534872337 0.6193152125544532 7 0.47461508474241065 0.5820746023227402 8 0.33377847487509305 0.46782926513358236 9 0.2935190392222135 0.4628261185284907 >10 3.472776229939487 13.990784518221764 >50 1.0171962475839589 12.867790809294238 >100 1.5523540540658336 47.89582383530533 >500 0.005549784667242511 0.609166876964975 >1k 0.0035677187146558997 1.2266680402411798 >5k 0.0011892395715519665 1.4520410325740203 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8692 0.5970013935985131 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCC 6894 0.4735075480290094 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 5321 0.36546760415758034 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTT 4479 0.3076356698030074 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 3286 0.2256956487994379 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATG 2540 0.17445737916937681 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTC 1469 0.10089680708654117 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05542799409042799 0.0 2 0.0 0.0 0.0 0.25090267956918644 0.0 3 0.0 0.0 0.0 0.3395737333123618 0.0 4 0.0 0.0 0.0 0.5582636133420058 0.0 5 0.0 0.0 0.0 1.259252594366675 0.0 6 0.0 0.0 0.0 1.5543190907885818 0.0 7 0.0 0.0 0.0 1.867586849210443 0.0 8 0.0 0.0 0.0 2.4282544028165938 0.0 9 0.0 0.0 0.0 2.6137699072010374 0.0 10 0.0 0.0 0.0 3.443610086383876 0.0 11 0.0 0.0 0.0 3.736203958534091 0.0 12 0.0 0.0 0.0 4.204422837981982 0.0 13 0.0 0.0 0.0 4.34680478562691 0.0 14 0.0 0.0 0.0 4.390075710381519 0.0 15 0.0 0.0 0.0 4.490903833460513 0.0 16 0.0 0.0 0.0 4.6437944342601325 0.0 17 0.0 0.0 0.0 4.8136499849238605 0.0 18 0.0 0.0 0.0 5.065995028651534 0.0 19 0.0 0.0 0.0 5.177400488892766 0.0 20 0.0 0.0 0.0 5.285509116771742 0.0 21 0.0 0.0 0.0 5.430569740711003 0.0 22 0.0 0.0 0.0 5.586688489865331 0.0 23 0.0 0.0 0.0 5.77323425436298 0.0 24 0.0 0.0 0.0 5.906687281026798 0.0 25 0.0 0.0 0.0 6.019603789434065 0.0 26 0.0 0.0 0.0 6.134786870090381 0.0 27 0.0 0.0 0.0 6.246535750369349 0.0 28 0.0 0.0 0.0 6.364878295372827 0.0 29 6.868400754699875E-5 0.0 0.0 6.491050817236664 0.0 30 6.868400754699875E-5 0.0 0.0 6.657197431492854 0.0 31 6.868400754699875E-5 0.0 0.0 6.8056235718019185 0.0 32 6.868400754699875E-5 0.0 0.0 6.940656330639317 0.0 33 6.868400754699875E-5 0.0 0.0 7.077474873672939 0.0 34 6.868400754699875E-5 0.0 0.0 7.225145489898987 0.0 35 6.868400754699875E-5 0.0 0.0 7.422818063619249 0.0 36 6.868400754699875E-5 0.0 0.0 7.575639980411321 0.0 37 6.868400754699875E-5 0.0 0.0 7.728393213195846 0.0 38 6.868400754699875E-5 0.0 0.0 7.858412039482315 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGA 20 7.857174E-4 44.000004 29 CGAGTTA 20 7.857174E-4 44.000004 16 CCGGCTA 20 7.857174E-4 44.000004 18 TGGCGTA 20 7.857174E-4 44.000004 27 TAGCGAA 20 7.857174E-4 44.000004 15 AAGCGTA 20 7.857174E-4 44.000004 10 TAACGCG 20 7.857174E-4 44.000004 1 CGCTAAT 40 8.314601E-9 44.000004 12 TATTCGT 40 8.314601E-9 44.000004 34 GTCACGA 20 7.857174E-4 44.000004 9 TCGCTAA 40 8.314601E-9 44.000004 11 AACGCAT 20 7.857174E-4 44.000004 18 TATTACG 40 8.314601E-9 44.000004 1 CGTCGTG 20 7.857174E-4 44.000004 15 ACTCCGT 20 7.857174E-4 44.000004 16 CACGTAG 40 8.314601E-9 44.000004 1 ATCGGCG 20 7.857174E-4 44.000004 34 ATCGGCC 20 7.857174E-4 44.000004 33 CCTATCG 20 7.857174E-4 44.000004 1 TTACCCG 20 7.857174E-4 44.000004 38 >>END_MODULE