##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545815_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2676709 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.773987011662456 31.0 31.0 33.0 30.0 34.0 2 32.18867870956462 33.0 31.0 34.0 30.0 34.0 3 32.21578849251077 34.0 31.0 34.0 30.0 34.0 4 35.86475033333844 37.0 35.0 37.0 35.0 37.0 5 35.86015999497891 37.0 35.0 37.0 35.0 37.0 6 35.90263939785759 37.0 35.0 37.0 35.0 37.0 7 36.14834858776206 37.0 35.0 37.0 35.0 37.0 8 36.12091527319556 37.0 35.0 37.0 35.0 37.0 9 37.95113402316053 39.0 39.0 39.0 35.0 39.0 10 37.6962138954963 39.0 38.0 39.0 35.0 39.0 11 37.29652270754871 39.0 37.0 39.0 35.0 39.0 12 35.83719335945745 35.0 35.0 39.0 33.0 39.0 13 35.36573306997511 35.0 35.0 39.0 32.0 39.0 14 36.122845628717954 36.0 35.0 41.0 31.0 41.0 15 36.48901617620742 36.0 35.0 41.0 33.0 41.0 16 36.69055022417454 36.0 35.0 41.0 33.0 41.0 17 36.670601473675326 36.0 35.0 41.0 33.0 41.0 18 36.657987476412266 36.0 35.0 40.0 33.0 41.0 19 36.53758365216391 36.0 35.0 40.0 33.0 41.0 20 36.3102937226273 35.0 35.0 40.0 33.0 41.0 21 36.11482533215228 35.0 35.0 40.0 32.0 41.0 22 36.1100026188876 35.0 35.0 40.0 32.0 41.0 23 36.14482784643381 35.0 35.0 40.0 32.0 41.0 24 36.1213927251711 35.0 35.0 40.0 32.0 41.0 25 36.02286016148935 35.0 35.0 40.0 32.0 41.0 26 35.932716630758144 35.0 35.0 40.0 32.0 41.0 27 35.81886189346694 35.0 35.0 40.0 32.0 41.0 28 35.874188415700026 36.0 35.0 40.0 32.0 41.0 29 35.916818376596034 36.0 35.0 40.0 32.0 41.0 30 35.856681469670406 36.0 35.0 40.0 32.0 41.0 31 35.606455165653045 35.0 35.0 40.0 31.0 41.0 32 35.356659988067435 35.0 35.0 40.0 31.0 41.0 33 35.168811028767045 35.0 35.0 40.0 30.0 41.0 34 34.98355069602262 35.0 35.0 40.0 30.0 41.0 35 34.802053192932064 35.0 34.0 40.0 29.0 41.0 36 34.565454817837875 35.0 34.0 40.0 27.0 41.0 37 34.447653443090005 35.0 34.0 40.0 27.0 41.0 38 34.408470625682504 35.0 34.0 40.0 27.0 41.0 39 34.44901257476999 35.0 34.0 40.0 27.0 41.0 40 34.22469943501516 35.0 34.0 40.0 25.0 41.0 41 34.23631294996953 35.0 34.0 40.0 25.0 41.0 42 34.195308866223414 35.0 34.0 40.0 25.0 41.0 43 34.10516234674744 35.0 34.0 39.0 26.0 41.0 44 33.98730082351126 35.0 34.0 39.0 25.0 41.0 45 33.88981843001985 35.0 34.0 39.0 24.0 41.0 46 33.91388567079948 35.0 34.0 39.0 24.0 41.0 47 33.86262010551016 35.0 34.0 39.0 24.0 41.0 48 33.84050974536268 35.0 34.0 39.0 24.0 41.0 49 33.867649789349535 35.0 34.0 39.0 24.0 41.0 50 33.619882848677236 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 3.0 12 3.0 13 8.0 14 13.0 15 40.0 16 135.0 17 393.0 18 910.0 19 1839.0 20 3395.0 21 5810.0 22 8879.0 23 12974.0 24 18744.0 25 28478.0 26 41128.0 27 50553.0 28 53388.0 29 54409.0 30 61351.0 31 72043.0 32 92660.0 33 127266.0 34 286920.0 35 716789.0 36 118887.0 37 139745.0 38 237576.0 39 542365.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.384587939891862 22.6682840757064 31.18874707710102 15.75838090730072 2 30.03348514911408 25.591986278672803 31.357274922301976 13.01725364991114 3 27.929707711970188 22.804794992657026 34.52710025632222 14.738397039050566 4 24.533484962317534 26.004433055666492 33.935067278512534 15.527014703503445 5 23.001715913085807 33.042067703287884 30.649764318795953 13.306452064830356 6 20.29585584387395 38.27016683546848 29.517627803395886 11.916349517261683 7 85.00214255640041 5.805263104805192 7.6567531248260465 1.535841213968347 8 88.65819930369719 2.8407271765440325 7.052316856258936 1.4487566634998426 9 85.5136288629059 4.024718413544393 8.235299391902519 2.226353331647183 10 65.7635551716679 16.166718160248276 11.710014050836307 6.359712617247523 11 61.2875362992391 14.1997878738406 16.563175152771556 7.949500674148741 12 51.80936739854799 19.245872450087028 19.692129402187536 9.252630749177442 13 18.559656653001877 52.87350997063932 20.05384223686624 8.512991139492563 14 11.326483379403589 52.488260770969134 27.664904926161192 8.520350923466093 15 9.319205038724792 19.559578572044998 61.894886593948016 9.226329795282192 16 9.91217199927224 13.250076866779317 59.33061830778019 17.507132826168252 17 11.754695785010624 13.464594021987446 29.421689096573438 45.359021096428485 18 20.075921588786827 19.749513301595353 39.78441436853988 20.390150741077942 19 31.824714602894822 20.27175908923981 27.111352037147107 20.79217427071826 20 32.93921752420603 20.231560472206727 25.31156730148851 21.517654702098735 21 19.337290680458725 28.61865073864959 31.06706780602598 20.976990774865705 22 21.379574694148673 23.290802250076492 25.13949032188407 30.190132733890756 23 15.273382351238032 32.68143828858497 25.574464762512473 26.470714597664518 24 17.229814671673314 21.018907920136257 46.2435401083943 15.507737299796132 25 12.196581697898427 22.734297975611096 43.976054176976284 21.093066149514197 26 12.13546186753958 37.2986753509627 30.657385617936058 19.90847716356167 27 15.145351997546241 38.27203480094399 31.05634568419653 15.526267517313238 28 9.899656630586291 28.773094124165162 46.55358501802026 14.773664227228286 29 11.382484984359525 22.387865098522102 44.972688476782494 21.256961440335875 30 14.412735938049298 32.66914707575609 34.932971794842096 17.985145191352515 31 31.646548055840213 25.373845270442175 25.66323048190894 17.316376191808672 32 33.22778083086357 24.97339083180129 28.054450446425065 13.74437789091007 33 30.77712220491656 26.375336280484728 25.335439900265587 17.512101614333123 34 16.703422000673214 28.154125084198544 29.3333716888911 25.809081226237147 35 17.971509043381257 25.051957459701445 34.69689831804653 22.27963517887077 36 35.35677580192692 21.817500520228386 27.0224368805126 15.803286797332097 37 18.785269523134566 33.87932718872317 30.882475457735598 16.452927830406665 38 18.80682584472201 35.852870072914165 22.70743663207319 22.632867450290636 39 19.035987849258174 32.91848310742782 28.836418153785115 19.209110889528898 40 24.556797171451958 24.28470932028846 24.754465278070946 26.404028230188636 41 15.229186288087348 23.3416109110105 26.819127518157558 34.610075282744596 42 22.12074603552347 23.03040786278972 25.198443312291325 29.650402789395486 43 23.276381556605518 25.033016289779724 25.39536423272011 26.29523792089465 44 17.691388940673043 32.47611152351638 29.933362199626483 19.899137336184097 45 14.15338761142881 43.57339553907429 21.149030395160626 21.12418645433628 46 22.097321748460516 35.3882696998441 24.976827888276237 17.537580663419146 47 21.913140352574747 27.453488593642415 26.768132060676002 23.865238993106832 48 24.30376256813871 22.303208903171768 33.06676220687419 20.326266321815332 49 20.984948307791395 21.939478665779507 35.249704020870404 21.825869005558694 50 17.779370114569794 37.69483346900989 25.30446903268155 19.22132738373876 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4023.0 1 4402.0 2 4781.0 3 15847.0 4 26913.0 5 20487.0 6 14061.0 7 14901.0 8 15741.0 9 17028.0 10 18315.0 11 17588.5 12 16862.0 13 15434.0 14 14006.0 15 12650.5 16 11295.0 17 11503.0 18 11711.0 19 10254.0 20 8797.0 21 9020.5 22 9244.0 23 9236.5 24 9229.0 25 10492.5 26 11756.0 27 14500.0 28 17244.0 29 17232.0 30 17220.0 31 23711.0 32 30202.0 33 37766.0 34 45330.0 35 46361.0 36 47392.0 37 55069.0 38 62746.0 39 92907.0 40 123068.0 41 199269.5 42 275471.0 43 325039.0 44 374607.0 45 384377.5 46 394148.0 47 339809.0 48 285470.0 49 249891.5 50 214313.0 51 196920.5 52 179528.0 53 160763.5 54 141999.0 55 121211.5 56 100424.0 57 83678.5 58 66933.0 59 56412.0 60 45891.0 61 39636.5 62 33382.0 63 26176.5 64 18971.0 65 15005.0 66 11039.0 67 8296.0 68 5553.0 69 4597.0 70 3641.0 71 2960.5 72 2280.0 73 1918.5 74 1557.0 75 1116.0 76 675.0 77 518.0 78 361.0 79 337.5 80 314.0 81 219.0 82 124.0 83 88.0 84 52.0 85 32.0 86 12.0 87 13.0 88 14.0 89 10.0 90 6.0 91 5.0 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2676709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.45428304742897 #Duplication Level Percentage of deduplicated Percentage of total 1 78.941593223688 9.04219352999123 2 9.81988533552925 2.2495949225289804 3 3.427661607241448 1.1778421872044658 4 1.623821767313757 0.7439885656555245 5 0.9210293961664685 0.527486569934666 6 0.5713123377897207 0.3926383935319087 7 0.3878276903704301 0.31096016973934837 8 0.2959309651043135 0.27117416294429053 9 0.21957059581328484 0.2263521378004188 >10 1.6805331030745032 4.046081306823384 >50 0.44996352949609847 3.7639017210700647 >100 1.1640288612807257 36.14427768543573 >500 0.47373267610261927 36.67711074923482 >1k 0.022448656428556174 3.1358157912664315 >5k 0.0 0.0 >10k+ 6.602546008398875E-4 1.2905821068387435 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 19203 0.7174108205262507 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14927 0.5576624130602168 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3060 0.11431948710151159 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02772060765664105 0.0 2 0.0 0.0 0.0 0.13680979142671093 0.0 3 0.0 0.0 0.0 0.19479143978669328 0.0 4 0.0 0.0 0.0 0.30982075376890056 0.0 5 0.0 0.0 0.0 0.543391156827283 0.0 6 0.0 0.0 0.0 0.7484190474197979 0.0 7 0.0 0.0 0.0 0.9001725626506281 0.0 8 0.0 0.0 0.0 1.2686847916602066 0.0 9 0.0 0.0 0.0 1.412704929822405 0.0 10 0.0 0.0 0.0 1.6690645116820693 0.0 11 3.7359309510297904E-5 0.0 0.0 1.8578037433280943 0.0 12 3.7359309510297904E-5 0.0 0.0 2.069332153775401 0.0 13 3.7359309510297904E-5 0.0 0.0 2.137923846036308 0.0 14 3.7359309510297904E-5 0.0 0.0 2.1595175269332603 0.0 15 3.7359309510297904E-5 0.0 0.0 2.197885537800336 0.0 16 3.7359309510297904E-5 0.0 0.0 2.2879588330296645 0.0 17 3.7359309510297904E-5 0.0 0.0 2.4057153766061234 0.0 18 3.7359309510297904E-5 0.0 0.0 2.623706947598712 3.7359309510297904E-5 19 3.7359309510297904E-5 0.0 0.0 2.686096994480909 3.7359309510297904E-5 20 3.7359309510297904E-5 0.0 0.0 2.756183059122228 3.7359309510297904E-5 21 3.7359309510297904E-5 0.0 0.0 2.8504032377071993 3.7359309510297904E-5 22 3.7359309510297904E-5 0.0 0.0 2.9349473551290037 3.7359309510297904E-5 23 3.7359309510297904E-5 0.0 0.0 3.0456429892080163 3.7359309510297904E-5 24 3.7359309510297904E-5 0.0 0.0 3.12010009306204 3.7359309510297904E-5 25 3.7359309510297904E-5 0.0 0.0 3.1740842953044206 3.7359309510297904E-5 26 3.7359309510297904E-5 0.0 0.0 3.242377113089245 3.7359309510297904E-5 27 3.7359309510297904E-5 0.0 0.0 3.3018904931391497 3.7359309510297904E-5 28 3.7359309510297904E-5 0.0 0.0 3.367269284782171 3.7359309510297904E-5 29 3.7359309510297904E-5 0.0 0.0 3.4339182929485426 3.7359309510297904E-5 30 3.7359309510297904E-5 0.0 0.0 3.545361113217761 3.7359309510297904E-5 31 3.7359309510297904E-5 0.0 0.0 3.6581488686293504 3.7359309510297904E-5 32 3.7359309510297904E-5 0.0 0.0 3.7399657564569027 3.7359309510297904E-5 33 3.7359309510297904E-5 0.0 0.0 3.8181587912619563 3.7359309510297904E-5 34 3.7359309510297904E-5 0.0 0.0 3.9010964583748176 3.7359309510297904E-5 35 3.7359309510297904E-5 0.0 0.0 4.050496337106499 3.7359309510297904E-5 36 3.7359309510297904E-5 0.0 0.0 4.14972266316585 3.7359309510297904E-5 37 3.7359309510297904E-5 0.0 0.0 4.242336391441879 3.7359309510297904E-5 38 3.7359309510297904E-5 0.0 0.0 4.326955227482704 3.7359309510297904E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGA 40 8.3200575E-9 44.000004 8 CAACGTT 55 1.8189894E-12 44.000004 31 CCAGGTA 20 7.858358E-4 44.000004 13 CTATACG 80 0.0 44.000004 1 CCGGATG 20 7.858358E-4 44.000004 5 GCACGAC 40 8.3200575E-9 44.000004 20 TGACGTA 20 7.858358E-4 44.000004 27 TCGATCT 20 7.858358E-4 44.000004 18 TAGTTCG 220 0.0 44.000004 1 GTTACTA 20 7.858358E-4 44.000004 27 ATCCGGT 40 8.3200575E-9 44.000004 37 ATCCGGA 40 8.3200575E-9 44.000004 43 CTGCGAC 20 7.858358E-4 44.000004 23 ACGTGTA 40 8.3200575E-9 44.000004 1 CTCGCTA 40 8.3200575E-9 44.000004 28 GCGATAT 40 8.3200575E-9 44.000004 9 ACCACGT 20 7.858358E-4 44.000004 18 GTTCACG 20 7.858358E-4 44.000004 14 AGTTAGT 40 8.3200575E-9 44.000004 10 CGTCGGT 20 7.858358E-4 44.000004 41 >>END_MODULE