##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545814_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3416786 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.668451287262357 31.0 31.0 33.0 30.0 34.0 2 32.08462748325473 33.0 31.0 34.0 30.0 34.0 3 32.06879213389425 33.0 31.0 34.0 30.0 34.0 4 35.82010989274716 37.0 35.0 37.0 35.0 37.0 5 35.831489885524 37.0 35.0 37.0 35.0 37.0 6 35.89930332189373 37.0 35.0 37.0 35.0 37.0 7 36.07366689046373 37.0 35.0 37.0 35.0 37.0 8 36.014158042089846 37.0 35.0 37.0 35.0 37.0 9 37.73927427705452 39.0 38.0 39.0 35.0 39.0 10 37.52022426924016 39.0 37.0 39.0 35.0 39.0 11 37.37124039960361 39.0 37.0 39.0 35.0 39.0 12 36.94720125872677 39.0 35.0 39.0 33.0 39.0 13 36.80554093817992 39.0 35.0 39.0 33.0 39.0 14 37.89777966779307 40.0 36.0 41.0 33.0 41.0 15 38.01304588581199 40.0 36.0 41.0 33.0 41.0 16 38.02853880810797 40.0 36.0 41.0 33.0 41.0 17 37.934681305765125 40.0 36.0 41.0 33.0 41.0 18 37.785383690989136 39.0 36.0 41.0 33.0 41.0 19 37.689712495895265 39.0 36.0 41.0 33.0 41.0 20 37.514073752350896 39.0 35.0 41.0 33.0 41.0 21 37.41944154535871 39.0 35.0 41.0 33.0 41.0 22 37.44017272372341 39.0 35.0 41.0 33.0 41.0 23 37.41250520225733 39.0 35.0 41.0 33.0 41.0 24 37.38101537526787 39.0 35.0 41.0 33.0 41.0 25 37.28058239526854 39.0 35.0 41.0 33.0 41.0 26 37.17935802827569 39.0 35.0 41.0 33.0 41.0 27 37.0755522880274 39.0 35.0 41.0 32.0 41.0 28 36.99097894922304 39.0 35.0 41.0 32.0 41.0 29 36.89340889362108 39.0 35.0 41.0 32.0 41.0 30 36.73367837494066 39.0 35.0 41.0 31.0 41.0 31 36.568548922876644 39.0 35.0 41.0 31.0 41.0 32 36.36034741420739 39.0 35.0 41.0 30.0 41.0 33 36.110178103047716 39.0 35.0 41.0 30.0 41.0 34 35.81974990532038 39.0 35.0 41.0 28.0 41.0 35 35.54187502524302 38.0 35.0 41.0 26.0 41.0 36 35.38310739976106 38.0 35.0 41.0 25.0 41.0 37 35.31438901938839 38.0 35.0 41.0 24.0 41.0 38 35.18069027442749 38.0 35.0 41.0 24.0 41.0 39 35.09500946210854 38.0 35.0 41.0 23.0 41.0 40 34.96890732987082 38.0 34.0 41.0 23.0 41.0 41 34.80473755160551 38.0 34.0 40.0 23.0 41.0 42 34.765085960900095 38.0 34.0 40.0 23.0 41.0 43 34.67842791442016 38.0 34.0 40.0 23.0 41.0 44 34.54093203378848 38.0 34.0 40.0 22.0 41.0 45 34.45052221590699 38.0 34.0 40.0 22.0 41.0 46 34.40420997978802 37.0 34.0 40.0 22.0 41.0 47 34.31618222505009 37.0 34.0 40.0 22.0 41.0 48 34.22290655604419 37.0 34.0 40.0 22.0 41.0 49 34.14324309453387 37.0 34.0 40.0 22.0 41.0 50 34.02108999510066 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 6.0 11 16.0 12 21.0 13 36.0 14 64.0 15 128.0 16 277.0 17 599.0 18 1321.0 19 2712.0 20 4754.0 21 7488.0 22 11702.0 23 17359.0 24 25726.0 25 39007.0 26 57966.0 27 71905.0 28 73531.0 29 72268.0 30 75831.0 31 85374.0 32 100983.0 33 128649.0 34 221770.0 35 357372.0 36 215457.0 37 290105.0 38 499145.0 39 1055212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.520540648433936 21.662140971076326 27.260150328408038 16.557168052081693 2 35.91372125734536 23.272894468661484 27.694857096698478 13.118527177294686 3 29.44433745631128 23.544845945868428 33.96923307459115 13.04158352322914 4 26.708052538262567 25.812327725529194 33.03554861205823 14.444071124150003 5 22.649530874921638 30.354871507902452 32.37437170487119 14.621225912304721 6 20.942136850244644 39.55240392579459 29.75585828319362 9.749600940767142 7 82.94013731032614 4.051087776641557 10.75791694299848 2.250857970033827 8 83.19643079783164 3.4854099729980166 11.063642850327764 2.254516378842573 9 77.62883013451822 5.879033688384347 12.89480816182225 3.5973280152751737 10 38.43096992319683 30.4888278048435 19.206002365966146 11.874199905993526 11 33.36422005943597 23.380978498507076 27.74376270565379 15.511038736403156 12 30.7719301120995 21.953818588580027 31.607188744041913 15.667062555278557 13 23.279508871787698 27.458728758546773 31.788997028201354 17.47276534146417 14 18.612637724458015 29.387207744353905 34.57395341704163 17.42620111414645 15 19.30150146950965 23.363505938036504 40.61489364566584 16.720098946788006 16 22.413783011286046 21.54062326408502 37.77125637953328 18.274337345095653 17 21.611420791351872 21.773766340648784 32.50528420568335 24.10952866231599 18 23.996996007358963 22.898244139375425 34.71742157688541 18.3873382763802 19 25.81987868131045 25.198036985635035 29.62825298394456 19.353831349109953 20 26.730676138335852 24.311794768533936 30.453941218443298 18.503587874686914 21 24.68565488151731 25.057495552838255 31.85127777976145 18.40557178588299 22 23.427747596718085 22.890195639996183 32.01415013992682 21.66790662335891 23 20.813507196529134 25.9527520892441 31.897607868915408 21.336132845311354 24 20.913776865159246 23.709386540450588 36.075218055798636 19.30161853859153 25 20.74630954353009 25.062705126981903 33.16719279463215 21.023792534855858 26 19.781660308839946 27.248619023842874 31.162589638332634 21.80713102898455 27 19.43141888312584 27.01211021117506 32.67201984555076 20.884451060148336 28 18.64491952378639 25.997296874899394 35.111359037411184 20.246424563903037 29 20.751402048591864 24.461467589717355 34.72239701286531 20.064733348825474 30 21.76080093983059 25.722447937915927 33.650307628279904 18.866443493973577 31 25.27518551059387 24.93006585721201 30.535128626726987 19.259620005467127 32 26.453076077928205 24.548713322988327 30.53302138325315 18.465189215830318 33 24.86640954393983 25.91130963425863 29.760745917362108 19.461534904439436 34 20.666848904204127 26.438413175422752 32.06686049404323 20.82787742632989 35 21.48732756455921 26.70164300602964 31.744861984332644 20.066167445078502 36 24.312731321188977 28.161406655260237 28.64788722501204 18.877974798538744 37 22.250764314768322 29.34275076051002 29.185351379922537 19.22113354479912 38 21.88954766262798 29.792032629494503 27.76310837143444 20.555311336443076 39 21.640395389117142 28.573460556206914 28.306425980438927 21.479718074237017 40 23.007411058228406 26.59347117437264 28.17756218855966 22.221555578839293 41 20.154788740061566 26.653732484270304 29.03670291320557 24.15477586246256 42 21.702646873406763 26.67691216248252 27.722368330940245 23.898072633170468 43 21.3767265494532 26.610826665761333 29.32273194750856 22.689714837276902 44 21.245696979559153 27.56394459588631 29.689041104710682 21.501317319843853 45 20.44307135419075 29.321356385796477 28.233609011509646 22.001963248503127 46 21.464616162674513 28.97930979581396 28.92604336355862 20.630030677952906 47 20.98714991222746 27.75757685731562 29.96810452864183 21.287168701815098 48 21.142412782070636 26.469904758448436 31.405566517774307 20.98211594170662 49 21.12104767462756 25.780338598905523 31.842000055022467 21.256613671444452 50 20.38965858558306 27.95794059095302 30.94416799881526 20.70823282464866 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2008.0 1 5336.5 2 8665.0 3 42260.5 4 75856.0 5 52258.5 6 28661.0 7 26901.0 8 25141.0 9 24714.5 10 24288.0 11 23688.0 12 23088.0 13 22057.0 14 21026.0 15 19438.5 16 17851.0 17 17296.5 18 16742.0 19 16498.0 20 16254.0 21 16690.5 22 17127.0 23 19343.5 24 21560.0 25 25499.5 26 29439.0 27 32144.5 28 34850.0 29 42037.0 30 49224.0 31 59643.0 32 70062.0 33 79550.5 34 89039.0 35 101684.5 36 114330.0 37 123764.0 38 133198.0 39 146988.0 40 160778.0 41 177697.0 42 194616.0 43 221957.5 44 249299.0 45 256437.0 46 263575.0 47 259065.5 48 254556.0 49 248105.0 50 241654.0 51 240689.0 52 239724.0 53 225186.5 54 210649.0 55 199127.5 56 187606.0 57 178712.0 58 169818.0 59 155746.5 60 141675.0 61 121303.5 62 100932.0 63 85609.0 64 70286.0 65 56928.0 66 43570.0 67 35310.0 68 27050.0 69 21999.5 70 16949.0 71 13685.5 72 10422.0 73 8456.0 74 6490.0 75 5307.5 76 4125.0 77 3058.0 78 1991.0 79 1635.0 80 1279.0 81 953.0 82 627.0 83 476.5 84 326.0 85 253.0 86 180.0 87 148.5 88 117.0 89 76.0 90 35.0 91 27.0 92 19.0 93 16.0 94 13.0 95 11.5 96 10.0 97 6.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3416786.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.6265541624449 #Duplication Level Percentage of deduplicated Percentage of total 1 79.17319983245258 13.95550695060799 2 6.462203904334202 2.2781277425701947 3 2.369807852535246 1.2531463940189926 4 1.2862585969836982 0.9068922730657418 5 0.8921018015582619 0.7862340361790688 6 0.6726770127900566 0.7114186679865344 7 0.5018106251207932 0.6191634514087397 8 0.4301110213487758 0.6065100170934954 9 0.3799061165832674 0.6026792166539163 >10 5.0834399099159375 21.500823850290402 >50 1.453082447425684 18.340929383664463 >100 1.2898319102471119 36.38796950807065 >500 0.0043876723127420645 0.5144269493029272 >1k 0.001012539764478938 0.37230066482453084 >5k 0.0 0.0 >10k+ 1.6875662741315634E-4 1.1638708942624976 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39127 1.1451404916784371 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 4362 0.12766383379000032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017121353224931267 0.0 2 0.0 0.0 0.0 0.05756872101442701 0.0 3 0.0 0.0 0.0 0.08979198580186175 0.0 4 0.0 0.0 0.0 0.13217099344237537 0.0 5 0.0 0.0 0.0 0.24110377413159617 0.0 6 0.0 0.0 0.0 0.3828451650176511 0.0 7 0.0 0.0 0.0 0.48112465925580356 0.0 8 0.0 0.0 0.0 0.6932831028926014 0.0 9 0.0 0.0 0.0 0.8057279560382183 0.0 10 0.0 0.0 0.0 0.9790487317613688 0.0 11 0.0 0.0 0.0 1.1064198928466693 0.0 12 0.0 0.0 0.0 1.2220548784735128 0.0 13 0.0 0.0 0.0 1.2725409200342075 0.0 14 0.0 0.0 0.0 1.2973888326632104 0.0 15 0.0 0.0 0.0 1.32516347233921 0.0 16 0.0 0.0 0.0 1.3789567154630111 0.0 17 0.0 0.0 0.0 1.442261821489552 0.0 18 0.0 0.0 0.0 1.5356536815592197 0.0 19 0.0 0.0 0.0 1.5806667435420305 0.0 20 0.0 0.0 0.0 1.6363916265168494 0.0 21 2.9267270469967975E-5 0.0 0.0 1.7033551413521362 0.0 22 2.9267270469967975E-5 0.0 0.0 1.7748550831102679 0.0 23 2.9267270469967975E-5 0.0 0.0 1.8529694279946125 0.0 24 2.9267270469967975E-5 0.0 0.0 1.9135819451379161 0.0 25 2.9267270469967975E-5 0.0 0.0 1.965794755656339 0.0 26 2.9267270469967975E-5 0.0 0.0 2.023334209400296 0.0 27 2.9267270469967975E-5 0.0 0.0 2.084532071952999 0.0 28 2.9267270469967975E-5 0.0 0.0 2.1483347215775295 0.0 29 2.9267270469967975E-5 0.0 0.0 2.2240198830128666 0.0 30 2.9267270469967975E-5 0.0 0.0 2.3129923852415692 0.0 31 2.9267270469967975E-5 0.0 0.0 2.3902872465527545 0.0 32 2.9267270469967975E-5 0.0 0.0 2.4708600421565765 0.0 33 2.9267270469967975E-5 0.0 0.0 2.5528376667429566 0.0 34 2.9267270469967975E-5 0.0 0.0 2.639527321875002 0.0 35 2.9267270469967975E-5 0.0 0.0 2.7421091048722395 0.0 36 2.9267270469967975E-5 0.0 0.0 2.8326035051653804 0.0 37 2.9267270469967975E-5 0.0 0.0 2.9248539416867194 0.0 38 2.9267270469967975E-5 0.0 0.0 3.046196045055207 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 21955 0.0 42.07607 1 TAATGCG 170 0.0 41.411762 1 CGGTCTA 350 0.0 38.971428 31 CGTTAGG 585 0.0 37.982906 2 ATAGGGC 1550 0.0 37.754837 4 TAGGGAC 3230 0.0 37.733746 5 AGCGCTA 35 7.2944276E-6 37.714283 40 TAGGGAT 3845 0.0 37.13394 5 GGGCGAT 4810 0.0 37.00208 7 GTAGGGA 4045 0.0 36.875153 4 AGGGCGA 2825 0.0 36.835396 6 CGAACGT 120 0.0 36.666668 37 CGTTGAT 500 0.0 36.52 25 ATAGGGA 4190 0.0 36.49165 4 ACGGGCG 380 0.0 36.473682 5 TAATCGT 510 0.0 36.235294 21 ATCGTAG 110 0.0 36.0 1 TAAGGGA 4040 0.0 35.940594 4 GTACGGG 1055 0.0 35.8673 3 CGGGATC 580 0.0 35.27586 6 >>END_MODULE