##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545812_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2153027 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72724865967775 31.0 31.0 33.0 30.0 34.0 2 32.13319201291949 33.0 31.0 34.0 30.0 34.0 3 32.16721666751044 33.0 31.0 34.0 30.0 34.0 4 35.86124233462934 37.0 35.0 37.0 35.0 37.0 5 35.83713998941955 37.0 35.0 37.0 35.0 37.0 6 35.88165917101829 37.0 35.0 37.0 35.0 37.0 7 36.12191161559981 37.0 35.0 37.0 35.0 37.0 8 36.087397882144536 37.0 35.0 37.0 35.0 37.0 9 37.91513901126182 39.0 39.0 39.0 35.0 39.0 10 37.625842592777516 39.0 37.0 39.0 35.0 39.0 11 37.26824977113617 39.0 37.0 39.0 34.0 39.0 12 36.113656261626076 37.0 35.0 39.0 33.0 39.0 13 35.738984230109516 37.0 35.0 39.0 32.0 39.0 14 36.58873994613165 38.0 35.0 41.0 32.0 41.0 15 36.876422357917484 38.0 35.0 41.0 33.0 41.0 16 37.04815685079657 38.0 35.0 41.0 33.0 41.0 17 37.02103132009027 38.0 35.0 41.0 33.0 41.0 18 36.97459948249604 38.0 35.0 41.0 33.0 41.0 19 36.890190880095794 37.0 35.0 41.0 33.0 41.0 20 36.69844409754267 36.0 35.0 41.0 33.0 41.0 21 36.51749467145558 36.0 35.0 41.0 32.0 41.0 22 36.498384832145625 36.0 35.0 41.0 32.0 41.0 23 36.51260620512423 36.0 35.0 40.0 32.0 41.0 24 36.49191812271746 36.0 35.0 41.0 33.0 41.0 25 36.41059726608166 36.0 35.0 40.0 32.0 41.0 26 36.287412094692726 35.0 35.0 40.0 32.0 41.0 27 36.19706673441624 36.0 35.0 40.0 32.0 41.0 28 36.24803079571227 36.0 35.0 40.0 32.0 41.0 29 36.257856496922706 36.0 35.0 40.0 32.0 41.0 30 36.18795537631437 36.0 35.0 40.0 32.0 41.0 31 35.965765408422655 36.0 35.0 40.0 31.0 41.0 32 35.753679819156936 35.0 35.0 40.0 31.0 41.0 33 35.58379388646775 36.0 35.0 40.0 30.0 41.0 34 35.41670633949319 36.0 35.0 40.0 30.0 41.0 35 35.20149956317315 35.0 35.0 40.0 29.0 41.0 36 35.01751719788001 35.0 35.0 40.0 28.0 41.0 37 34.9204320243081 35.0 34.0 40.0 27.0 41.0 38 34.87700293586657 35.0 34.0 40.0 27.0 41.0 39 34.873172514789644 35.0 34.0 40.0 27.0 41.0 40 34.69353798164166 35.0 34.0 40.0 26.0 41.0 41 34.63191311581323 35.0 34.0 40.0 26.0 41.0 42 34.623118056578015 35.0 34.0 40.0 26.0 41.0 43 34.53276665829086 35.0 34.0 40.0 26.0 41.0 44 34.408661851430566 35.0 34.0 40.0 26.0 41.0 45 34.29581421877199 35.0 34.0 40.0 24.0 41.0 46 34.26657399094391 35.0 34.0 40.0 25.0 41.0 47 34.217056265434664 35.0 34.0 40.0 24.0 41.0 48 34.18429169722442 35.0 34.0 40.0 24.0 41.0 49 34.17406562946029 35.0 34.0 40.0 24.0 41.0 50 33.96357268162452 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 7.0 13 11.0 14 27.0 15 55.0 16 112.0 17 309.0 18 629.0 19 1423.0 20 2559.0 21 4387.0 22 6745.0 23 10042.0 24 14877.0 25 22410.0 26 31974.0 27 38873.0 28 40753.0 29 42191.0 30 47201.0 31 56135.0 32 70822.0 33 96382.0 34 204509.0 35 480164.0 36 107965.0 37 131502.0 38 225449.0 39 515510.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.75857664581076 23.380756488423042 29.492709566577663 14.36795729918854 2 29.850206244510634 25.288860752791305 31.088509340570276 13.772423662127785 3 27.579496216257386 24.76295002338568 33.707798369458445 13.949755390898488 4 25.286724225938645 27.06115622330793 32.60502538983487 15.047094160918558 5 22.511515183042295 32.073726897061675 30.88786160136403 14.526896318532001 6 19.976015163767105 39.99401772481255 29.20539315113094 10.824573960289397 7 86.54587239268248 4.4435578374075195 7.3661407869014175 1.6444289830085734 8 88.5774307521457 3.1923891339959973 6.785841515224844 1.444338598633459 9 85.70598510840783 4.123914841755352 7.996044638548424 2.174055411288386 10 58.07400464555251 22.300231255808683 11.728139034020474 7.8976250646183255 11 51.55708683634715 17.176468293244813 20.996206735911812 10.270238134496223 12 47.588906223656274 19.553958217895083 22.717132669492766 10.140002888955875 13 20.956216526778345 45.96184813288453 22.026570033724614 11.055365306612504 14 12.652558467682942 47.13939955235118 27.063153411452806 13.144888568513075 15 11.238038352514854 22.766923034406908 54.115020387575264 11.880018225502978 16 12.60169983934247 16.61261098908653 52.56636354304892 18.219325628522075 17 13.415252107846301 16.46858121147575 30.827899510781798 39.28826716989615 18 19.46910094485578 21.853697143602936 37.388941244118165 21.28826066742312 19 29.24361840329917 23.506718680258075 26.511790144758983 20.737872771683776 20 32.054776832803306 20.43936281337856 27.080292072510005 20.42556828130813 21 20.600809929462102 28.851519279600303 28.959042315772166 21.588628475165432 22 21.96279935179633 23.508437190987387 26.524330628459374 28.004432828756908 23 17.26466969527089 31.401185400833338 26.36627408759853 24.967870816297243 24 17.861410934465756 21.80845850980968 43.68923380895827 16.6408967467663 25 15.111840213801313 24.21195832657928 40.11333810490997 20.56286335470944 26 14.455554900147561 36.43892993445972 28.915289961528583 20.19022520386414 27 14.965859694281585 37.40217842135747 29.554065044237714 18.07789684012323 28 12.124557657660587 28.538007187090546 42.272112704578255 17.065322450670614 29 12.726082859155971 22.73854438425528 42.40411290708384 22.131259849504907 30 15.707002280974647 32.262577292342364 33.364653578427024 18.665766848255966 31 29.238184193695666 26.960228552637748 25.43219383686317 18.369393416803412 32 30.75261016234353 26.4906106611761 26.347463362047947 16.409315814432425 33 28.046652457214886 28.27488926056199 25.924663276401084 17.753795005822035 34 18.000006502473028 27.69839858023146 28.949474391171126 25.352120526124384 35 19.635564254419474 26.001717581804595 32.54320544981554 21.819512713960393 36 30.49618049378851 24.65022500878995 27.02604286894684 17.8275516284747 37 19.249503141391166 32.97496965899638 30.273377900044913 17.50214929956754 38 18.90264265148556 34.02168203185562 25.933302276283577 21.142373040375247 39 19.270636178738123 33.357872427981626 27.36900187503454 20.002489518245707 40 24.757608706254032 26.644301255859776 24.530718843748826 24.067371194137372 41 15.752751823363106 24.62161412745869 28.303918158016593 31.321715891161606 42 21.51250309448047 25.01877589087364 24.33007110454258 29.13864991010331 43 21.92907938451306 26.477373483936802 25.11919265294862 26.474354478601526 44 18.552438032593184 31.967179231844284 28.502940278965383 20.977442456597153 45 15.946897089539519 40.75824409076152 21.737163537661164 21.557695282037802 46 21.15737517457979 35.38269608323537 25.5914115336222 17.868517208562643 47 20.739033927581957 27.975311038830448 27.13133648579419 24.15431854779341 48 22.912021075444013 23.58103265774187 31.715301294410146 21.79164497240397 49 20.336437954563504 23.846426449830865 33.9919564408621 21.82517915474353 50 18.52893623721393 34.54522400322894 26.95883516555993 19.967004593997196 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1470.0 1 2457.5 2 3445.0 3 11981.0 4 20517.0 5 15547.5 6 10578.0 7 10746.0 8 10914.0 9 11632.5 10 12351.0 11 12207.0 12 12063.0 13 11325.0 14 10587.0 15 9873.5 16 9160.0 17 8975.5 18 8791.0 19 7918.0 20 7045.0 21 7584.0 22 8123.0 23 7461.0 24 6799.0 25 8731.5 26 10664.0 27 14521.5 28 18379.0 29 18859.5 30 19340.0 31 25356.5 32 31373.0 33 38630.5 34 45888.0 35 52671.5 36 59455.0 37 63503.5 38 67552.0 39 89590.0 40 111628.0 41 149859.5 42 188091.0 43 233796.5 44 279502.0 45 277273.0 46 275044.0 47 240061.5 48 205079.0 49 190806.0 50 176533.0 51 165406.0 52 154279.0 53 137024.0 54 119769.0 55 103917.5 56 88066.0 57 77800.0 58 67534.0 59 55375.0 60 43216.0 61 35851.0 62 28486.0 63 23374.0 64 18262.0 65 14372.5 66 10483.0 67 7980.0 68 5477.0 69 4167.0 70 2857.0 71 2329.5 72 1802.0 73 1467.0 74 1132.0 75 860.0 76 588.0 77 435.5 78 283.0 79 264.0 80 245.0 81 176.0 82 107.0 83 73.0 84 39.0 85 27.5 86 16.0 87 11.5 88 7.0 89 6.5 90 6.0 91 3.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2153027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.221855181621734 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3398203045242 11.283594345068346 2 8.96086327505386 2.548801996002573 3 3.074400965828007 1.3117105591873173 4 1.4260877227282793 0.8112645227572126 5 0.8374521544084336 0.5955061630766932 6 0.5653696589053708 0.48243632478210363 7 0.38793234186347086 0.386198231037476 8 0.2930745898271251 0.3334451499147651 9 0.2466980384838768 0.3157653399217057 >10 2.432564749183499 7.928036007233572 >50 0.7342566890800989 7.5018637982677845 >100 1.591440147739107 56.13675810032899 >500 0.1057435314112355 8.703407958280884 >1k 0.0036349338922612206 0.6438909929339691 >5k 0.0 0.0 >10k+ 6.60897071320222E-4 1.0173205112066002 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11573 0.5375222883874656 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 10074 0.4678993807323364 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 2202 0.10227461151207115 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04379880047951094 0.0 2 0.0 0.0 0.0 0.15540910541298367 0.0 3 0.0 0.0 0.0 0.21904044863348207 0.0 4 0.0 0.0 0.0 0.3298611675561895 0.0 5 0.0 0.0 0.0 0.5714744868503739 0.0 6 0.0 0.0 0.0 0.7713790862817791 0.0 7 0.0 0.0 0.0 0.924698111078031 0.0 8 0.0 0.0 0.0 1.2951532888347428 0.0 9 0.0 0.0 0.0 1.4331915020108899 0.0 10 0.0 0.0 0.0 1.696170089831665 0.0 11 0.0 0.0 0.0 1.9280296995811015 0.0 12 0.0 0.0 0.0 2.1507858470887733 0.0 13 0.0 0.0 0.0 2.2317880825461085 0.0 14 0.0 0.0 0.0 2.2576586359576543 0.0 15 0.0 0.0 0.0 2.3007607428982544 0.0 16 0.0 0.0 0.0 2.411070553225761 0.0 17 0.0 0.0 0.0 2.5524528953886785 0.0 18 0.0 0.0 0.0 2.7721435913251438 0.0 19 0.0 0.0 0.0 2.861924165372752 0.0 20 0.0 0.0 0.0 2.954909529699349 0.0 21 0.0 0.0 0.0 3.0770166839524076 0.0 22 0.0 0.0 0.0 3.2057192037071527 0.0 23 0.0 0.0 0.0 3.362568142433885 0.0 24 0.0 0.0 0.0 3.471995474278771 0.0 25 0.0 0.0 0.0 3.5605219999563404 0.0 26 0.0 0.0 0.0 3.662843057704339 0.0 27 0.0 0.0 0.0 3.754992389784243 0.0 28 0.0 0.0 0.0 3.8476061842234213 0.0 29 0.0 0.0 0.0 3.95698706983238 0.0 30 0.0 0.0 0.0 4.1033391592395265 0.0 31 0.0 0.0 0.0 4.245046625053936 0.0 32 0.0 0.0 0.0 4.3588863493119225 0.0 33 0.0 0.0 0.0 4.473701444524384 0.0 34 0.0 0.0 0.0 4.60467982983957 0.0 35 0.0 0.0 0.0 4.782568913441401 0.0 36 0.0 0.0 0.0 4.924694395379157 0.0 37 0.0 0.0 0.0 5.064636904228326 0.0 38 0.0 0.0 0.0 5.19584752072315 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCCGC 20 7.858014E-4 44.000004 20 GACCGAC 20 7.858014E-4 44.000004 42 ACCGACA 20 7.858014E-4 44.000004 43 CACGAAC 20 7.858014E-4 44.000004 36 TCTACGT 20 7.858014E-4 44.000004 39 AAGTTCG 40 8.3182385E-9 44.000004 1 CGTAGCG 20 7.858014E-4 44.000004 2 AACGCGT 65 0.0 44.000004 39 AACGATC 20 7.858014E-4 44.000004 14 ACCCGTA 40 8.3182385E-9 44.000004 33 CGCACGG 65 0.0 44.000004 2 CACCGCT 20 7.858014E-4 44.000004 24 CGATACA 20 7.858014E-4 44.000004 10 CGCCCGC 40 8.3182385E-9 44.000004 26 CCCGATA 20 7.858014E-4 44.000004 30 GCGAGAC 50 2.7284841E-11 44.0 21 TCCGGCA 45 4.802132E-10 44.0 34 TCACGAG 30 2.5287518E-6 44.0 44 TCACGAC 245 0.0 44.0 25 AACGTCG 50 2.7284841E-11 44.0 2 >>END_MODULE