##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545811_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2808279 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.636047914042727 31.0 31.0 33.0 30.0 34.0 2 32.04594344080485 33.0 31.0 34.0 30.0 34.0 3 32.085781006801675 33.0 31.0 34.0 30.0 34.0 4 35.80168743917538 37.0 35.0 37.0 35.0 37.0 5 35.78704039021764 37.0 35.0 37.0 35.0 37.0 6 35.84206519366487 37.0 35.0 37.0 35.0 37.0 7 36.040325053173135 37.0 35.0 37.0 35.0 37.0 8 35.974013265775945 37.0 35.0 37.0 35.0 37.0 9 37.70391154155267 39.0 38.0 39.0 35.0 39.0 10 37.47931882836428 39.0 37.0 39.0 35.0 39.0 11 37.23701704851975 39.0 37.0 39.0 34.0 39.0 12 36.55351195518679 39.0 35.0 39.0 33.0 39.0 13 36.31187784404612 39.0 35.0 39.0 33.0 39.0 14 37.29123922516246 39.0 35.0 41.0 33.0 41.0 15 37.465799516358594 39.0 35.0 41.0 33.0 41.0 16 37.549513064763154 39.0 35.0 41.0 33.0 41.0 17 37.47441511331317 39.0 35.0 41.0 33.0 41.0 18 37.39473820086964 39.0 35.0 41.0 33.0 41.0 19 37.313786486314214 39.0 35.0 41.0 33.0 41.0 20 37.14320692495297 39.0 35.0 41.0 33.0 41.0 21 37.02971962543608 38.0 35.0 41.0 32.0 41.0 22 37.059630827278916 39.0 35.0 41.0 32.0 41.0 23 37.07870977207037 39.0 35.0 41.0 33.0 41.0 24 37.035046375377945 38.0 35.0 41.0 33.0 41.0 25 36.93278588060517 38.0 35.0 41.0 32.0 41.0 26 36.829258773789924 38.0 35.0 41.0 32.0 41.0 27 36.72589653663329 38.0 35.0 41.0 32.0 41.0 28 36.688376404196305 38.0 35.0 41.0 32.0 41.0 29 36.63194006008662 38.0 35.0 41.0 32.0 41.0 30 36.501951195020155 38.0 35.0 41.0 31.0 41.0 31 36.34416309775489 38.0 35.0 41.0 31.0 41.0 32 36.15039602546613 38.0 35.0 41.0 30.0 41.0 33 35.96029240684419 38.0 35.0 41.0 30.0 41.0 34 35.74081706269213 38.0 35.0 41.0 29.0 41.0 35 35.52490546701378 38.0 35.0 41.0 28.0 41.0 36 35.36425796724613 38.0 35.0 40.0 27.0 41.0 37 35.28876689246332 38.0 34.0 40.0 27.0 41.0 38 35.195879398022775 38.0 34.0 40.0 27.0 41.0 39 35.13131138323507 38.0 34.0 40.0 26.0 41.0 40 34.97581686150129 37.0 34.0 40.0 25.0 41.0 41 34.87567723862195 37.0 34.0 40.0 24.0 41.0 42 34.87143691919499 37.0 34.0 40.0 24.0 41.0 43 34.79177674298031 37.0 34.0 40.0 24.0 41.0 44 34.64884115858859 37.0 34.0 40.0 24.0 41.0 45 34.556693975206876 37.0 34.0 40.0 23.0 41.0 46 34.503303624746685 36.0 34.0 40.0 23.0 41.0 47 34.42714488126002 36.0 34.0 40.0 23.0 41.0 48 34.3611720915194 36.0 34.0 40.0 23.0 41.0 49 34.315050249636876 36.0 34.0 40.0 24.0 41.0 50 34.13914571878364 36.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 5.0 12 6.0 13 30.0 14 50.0 15 119.0 16 230.0 17 516.0 18 1142.0 19 2223.0 20 3942.0 21 6292.0 22 9347.0 23 13739.0 24 20082.0 25 29189.0 26 41626.0 27 51455.0 28 55408.0 29 57269.0 30 63007.0 31 73518.0 32 90363.0 33 118512.0 34 219890.0 35 409334.0 36 169123.0 37 219938.0 38 368156.0 39 783764.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.504299608407855 22.269154880978707 28.071284939993497 15.15526057061994 2 33.116189666340134 24.72304211939056 28.597977622593767 13.562790591675542 3 29.456795425240866 24.30609636720568 32.653664397305256 13.583443810248196 4 25.928691558068127 26.62516794093464 32.237573261061314 15.208567239935919 5 22.797414359470693 31.02672490874304 31.730501136105065 14.445359595681198 6 20.48136955053255 39.70620440490421 28.84816643930322 10.964259605260018 7 83.54066672150452 4.738097603550075 9.400419260337024 2.3208164146083776 8 83.95978462253927 4.0883758344523455 9.372893505239329 2.578946037769039 9 79.1424569994648 5.631954659775613 11.239445938241891 3.9861424025176984 10 47.09795572306028 24.5521545402006 17.33367660406961 11.01621313266951 11 39.54211814424421 21.715221315261054 24.678210391488882 14.06445014900585 12 36.45431953164198 20.78137535479915 28.08983722771135 14.674467885847525 13 23.313281906819086 33.64017606512743 28.053551659219046 14.992990368834436 14 16.952624721404106 36.07946361454827 30.91776137627351 16.050150287774116 15 16.175778831091925 23.643377314006194 44.78885466864225 15.391989186259627 16 18.570946832561862 19.93729967713322 42.47042405686899 19.021329433435923 17 19.04151973504057 19.26186821181229 31.588599280911904 30.108012772235238 18 21.080633370117425 22.684961145242337 35.5680828008898 20.66632268375044 19 26.720137137371324 23.808816716572675 29.318276424813916 20.152769721242084 20 27.783955938850806 23.560586394727874 28.781542004907635 19.87391566151369 21 22.267623694084527 26.726155057955424 31.137504500087065 19.868716747872988 22 21.84437514933523 23.532882594642484 29.956282833721293 24.66645942230099 23 19.140370312209008 27.401942613251745 29.468368349441064 23.989318725098183 24 19.162982025646315 23.384784773877524 38.302390894921764 19.149842305554397 25 18.807924711184324 24.271092722624783 35.47952322401015 21.441459342180742 26 17.656116076785818 28.982554796015634 30.854733450629375 22.506595676569173 27 17.974816604760424 30.26928592208965 30.915553618426088 20.840343854723837 28 16.40713048810321 26.254015359584997 37.2486138307483 20.090240321563492 29 17.62944493762906 23.096886028774207 37.28664424012001 21.987024793476717 30 19.226686522243693 28.126407668183965 33.58405628500587 19.06284952456647 31 26.5105425778564 25.779561076374534 28.443220919289004 19.266675426480063 32 28.234374148722402 24.33643523310896 28.69800329668099 18.731187321487646 33 26.426718997649452 25.73989265311602 28.074169268794165 19.759219080440367 34 19.351602885610724 26.192732274820273 31.588100754946357 22.867564084622646 35 20.517548292032238 26.357103407460585 32.0209637290312 21.104384571475983 36 26.40364436724414 26.048622661779685 28.722253024005095 18.82547994697108 37 20.892154946143172 30.773188846264922 29.59955189637497 18.73510431121694 38 20.670453327464973 31.40731387444054 27.061769859761085 20.860462938333406 39 20.39601478343142 29.98252666490758 28.79713874582974 20.82431980583126 40 23.2741832275212 26.53087531545121 28.11365964706498 22.081281809962615 41 17.954946784133625 25.56245301837887 29.14037387310876 27.34222632437874 42 21.02672134784329 25.487994604524694 27.215244639154445 26.270039408477576 43 21.414930639014145 25.7557386570209 28.599081501517475 24.230249202447478 44 19.936195798209507 27.72463134895073 29.398147406294033 22.941025446545734 45 18.476689816075968 32.62610303321002 26.47938470500972 22.417822445704292 46 21.4569136471127 31.432738698683426 27.532164717252094 19.578182936951777 47 21.057238258734266 27.033211443734757 29.454089141427897 22.45546115610308 48 21.300091621950667 25.88450079212215 31.27175042080933 21.543657165117853 49 20.846041294330085 24.797144443269346 33.22547367978751 21.131340582613053 50 19.80016942761029 30.062326428392623 29.37083530518157 20.766668838815516 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2131.0 1 4534.0 2 6937.0 3 24205.0 4 41473.0 5 29005.5 6 16538.0 7 16445.5 8 16353.0 9 16289.0 10 16225.0 11 15436.0 12 14647.0 13 14156.5 14 13666.0 15 12729.0 16 11792.0 17 11429.0 18 11066.0 19 10818.5 20 10571.0 21 11466.0 22 12361.0 23 13310.0 24 14259.0 25 15597.0 26 16935.0 27 24653.5 28 32372.0 29 35714.5 30 39057.0 31 45006.5 32 50956.0 33 61575.0 34 72194.0 35 80470.5 36 88747.0 37 93313.0 38 97879.0 39 119597.5 40 141316.0 41 173099.0 42 204882.0 43 226569.0 44 248256.0 45 260650.0 46 273044.0 47 257018.5 48 240993.0 49 232497.5 50 224002.0 51 208255.5 52 192509.0 53 176393.0 54 160277.0 55 149030.5 56 137784.0 57 130496.0 58 123208.0 59 107809.5 60 92411.0 61 80325.0 62 68239.0 63 55973.0 64 43707.0 65 36017.0 66 28327.0 67 22518.0 68 16709.0 69 13611.0 70 10513.0 71 8857.0 72 7201.0 73 5486.5 74 3772.0 75 3002.0 76 2232.0 77 1738.0 78 1244.0 79 968.0 80 692.0 81 560.5 82 429.0 83 289.0 84 149.0 85 107.0 86 65.0 87 76.0 88 87.0 89 60.5 90 34.0 91 27.5 92 21.0 93 15.5 94 10.0 95 8.0 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2808279.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.687520265590848 #Duplication Level Percentage of deduplicated Percentage of total 1 79.77805859275813 13.312979695161452 2 7.8459303658318795 2.618582439644682 3 2.6610471668815383 1.3321883557508634 4 1.3509403468748453 0.9017537766431324 5 0.8347349136144214 0.696482789366844 6 0.5856625310038398 0.5863953212954282 7 0.4286716594678318 0.500742690325773 8 0.3456642555718861 0.4614623415956979 9 0.28256347175207247 0.4243755295060574 >10 3.371193435876002 13.294133261420685 >50 0.9667963677637167 11.51719087849456 >100 1.53381816533381 51.394629637446045 >500 0.012756592883089286 1.3257117417980573 >1k 0.0017297075095714285 0.5294837060361562 >5k 2.1621343869642856E-4 0.31130394655400045 >10k+ 2.1621343869642856E-4 0.7925838889605618 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21967 0.7822228489405789 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 8628 0.3072344307670285 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCC 3227 0.11491023505855365 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 2970 0.10575872269101468 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04878432662851519 0.0 2 0.0 0.0 0.0 0.18513117820558428 0.0 3 0.0 0.0 0.0 0.2563135642861696 0.0 4 0.0 0.0 0.0 0.38350890349569966 0.0 5 0.0 0.0 0.0 0.7219368161069466 0.0 6 0.0 0.0 0.0 0.9694905669985069 0.0 7 0.0 0.0 0.0 1.1671917213353802 0.0 8 0.0 0.0 0.0 1.6031170692085794 0.0 9 0.0 0.0 0.0 1.7631082951515857 0.0 10 0.0 0.0 0.0 2.1306643677497856 0.0 11 0.0 0.0 0.0 2.358918041975174 0.0 12 0.0 0.0 0.0 2.620751000879898 0.0 13 0.0 0.0 0.0 2.716824076240288 0.0 14 0.0 0.0 0.0 2.7530384267375143 0.0 15 0.0 0.0 0.0 2.809692341822162 0.0 16 0.0 0.0 0.0 2.9221455560505207 0.0 17 0.0 0.0 0.0 3.050587210173918 0.0 18 0.0 0.0 0.0 3.2529175341908694 0.0 19 0.0 0.0 0.0 3.339767879188642 0.0 20 0.0 0.0 0.0 3.437692622421063 0.0 21 0.0 0.0 0.0 3.5617543698471557 0.0 22 0.0 0.0 0.0 3.695644200594029 0.0 23 0.0 0.0 0.0 3.8413206095263326 0.0 24 0.0 0.0 0.0 3.963388253090238 0.0 25 0.0 0.0 0.0 4.061918349280823 0.0 26 0.0 0.0 0.0 4.164044954222853 0.0 27 0.0 0.0 0.0 4.274788936569337 0.0 28 0.0 0.0 0.0 4.376879932513828 0.0 29 3.560899753906218E-5 0.0 0.0 4.504253316711053 0.0 30 3.560899753906218E-5 0.0 0.0 4.648327320754099 0.0 31 3.560899753906218E-5 0.0 0.0 4.776092403924254 0.0 32 3.560899753906218E-5 0.0 0.0 4.89662886059398 0.0 33 3.560899753906218E-5 0.0 0.0 5.020049646064369 0.0 34 3.560899753906218E-5 0.0 0.0 5.155826753680813 0.0 35 3.560899753906218E-5 0.0 0.0 5.317028685540148 0.0 36 3.560899753906218E-5 0.0 0.0 5.446004474626631 0.0 37 3.560899753906218E-5 0.0 0.0 5.577508502538388 0.0 38 3.560899753906218E-5 0.0 0.0 5.727279946187683 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTCGA 20 7.858425E-4 44.000004 14 ATACGCC 20 7.858425E-4 44.000004 13 CGAACTA 25 4.4444874E-5 44.0 30 CGCTAAT 35 1.4470788E-7 44.0 24 AACGCGT 25 4.4444874E-5 44.0 14 TATTACG 25 4.4444874E-5 44.0 1 TATAGCG 150 0.0 44.0 1 CGCAACT 30 2.5290283E-6 44.0 13 ATCGAGT 30 2.5290283E-6 44.0 30 TAATCCG 55 1.8189894E-12 44.0 1 CGTTTTT 12230 0.0 41.625507 1 TTACGAG 165 0.0 41.333332 1 TCACGAC 440 0.0 41.0 25 ACCCACG 65 0.0 40.615383 25 CGGTCTA 440 0.0 40.0 31 GTGCGTA 55 7.8216544E-11 40.0 16 CGGGTAT 270 0.0 39.925926 6 CATGACG 105 0.0 39.809525 1 CGAATAT 465 0.0 39.741936 14 CGTAAAC 50 1.3496901E-9 39.6 43 >>END_MODULE