##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545810_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2109127 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.719489627699044 31.0 31.0 33.0 30.0 34.0 2 32.14258174116589 33.0 31.0 34.0 30.0 34.0 3 32.18667723660074 33.0 31.0 34.0 30.0 34.0 4 35.86640823430737 37.0 35.0 37.0 35.0 37.0 5 35.85727507162916 37.0 35.0 37.0 35.0 37.0 6 35.923329415440605 37.0 35.0 37.0 35.0 37.0 7 36.101468522284335 37.0 35.0 37.0 35.0 37.0 8 36.04987893095105 37.0 35.0 37.0 35.0 37.0 9 37.804869977009446 39.0 38.0 39.0 35.0 39.0 10 37.59292114699589 39.0 37.0 39.0 35.0 39.0 11 37.30644148029019 39.0 37.0 39.0 35.0 39.0 12 36.38797853329837 38.0 35.0 39.0 33.0 39.0 13 36.08802646782294 38.0 35.0 39.0 33.0 39.0 14 37.04319275226195 39.0 35.0 41.0 33.0 41.0 15 37.27361557649208 39.0 35.0 41.0 33.0 41.0 16 37.37623433771414 39.0 35.0 41.0 33.0 41.0 17 37.323470800952244 38.0 35.0 41.0 33.0 41.0 18 37.245853379146915 38.0 35.0 41.0 33.0 41.0 19 37.13989816639776 38.0 35.0 41.0 33.0 41.0 20 36.96821196637282 38.0 35.0 41.0 33.0 41.0 21 36.831568701173516 38.0 35.0 41.0 33.0 41.0 22 36.81745195998155 38.0 35.0 41.0 33.0 41.0 23 36.80905938807857 38.0 35.0 41.0 33.0 41.0 24 36.773504393049826 38.0 35.0 41.0 33.0 41.0 25 36.68245534763909 38.0 35.0 41.0 33.0 41.0 26 36.5638181105263 37.0 35.0 41.0 32.0 41.0 27 36.456009998449595 37.0 35.0 41.0 32.0 41.0 28 36.43441291112389 37.0 35.0 41.0 32.0 41.0 29 36.423336290322965 37.0 35.0 41.0 32.0 41.0 30 36.326445965558264 37.0 35.0 40.0 32.0 41.0 31 36.15228101484643 37.0 35.0 40.0 31.0 41.0 32 35.92098247284303 37.0 35.0 40.0 31.0 41.0 33 35.71978927774382 37.0 35.0 40.0 30.0 41.0 34 35.550432477513205 37.0 35.0 40.0 30.0 41.0 35 35.33294723361846 36.0 35.0 40.0 29.0 41.0 36 35.15057556989219 36.0 35.0 40.0 27.0 41.0 37 35.05583163081218 36.0 34.0 40.0 27.0 41.0 38 34.99420992666634 36.0 34.0 40.0 27.0 41.0 39 34.97176604348624 36.0 34.0 40.0 27.0 41.0 40 34.78509307405386 36.0 34.0 40.0 25.0 41.0 41 34.72246384404543 36.0 34.0 40.0 25.0 41.0 42 34.705088882746274 36.0 34.0 40.0 25.0 41.0 43 34.61084515062393 35.0 34.0 40.0 25.0 41.0 44 34.47335319305096 35.0 34.0 40.0 24.0 41.0 45 34.36197488344704 35.0 34.0 40.0 24.0 41.0 46 34.32275202014862 35.0 34.0 40.0 24.0 41.0 47 34.28838614270264 35.0 34.0 40.0 24.0 41.0 48 34.232992133712195 35.0 34.0 40.0 24.0 41.0 49 34.19154844634771 35.0 34.0 40.0 24.0 41.0 50 34.00790279580129 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 7.0 12 9.0 13 15.0 14 36.0 15 46.0 16 118.0 17 306.0 18 670.0 19 1473.0 20 2580.0 21 4532.0 22 6491.0 23 9700.0 24 14431.0 25 21219.0 26 30494.0 27 38429.0 28 40668.0 29 42241.0 30 45572.0 31 53579.0 32 67003.0 33 90241.0 34 186909.0 35 405569.0 36 114977.0 37 144883.0 38 244189.0 39 542734.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.645592228443334 23.419263041059168 28.82543346133258 15.109711269164919 2 32.49315949205525 25.574420127379717 29.91716477955097 12.015255601014069 3 29.7201638402998 24.060950336323987 33.127165884273445 13.091719939102767 4 27.168397161479607 25.704426523390957 32.293029296007305 14.83414701912213 5 22.6314015229998 32.534740677066864 30.706021970227493 14.127835829705845 6 21.430478107766863 40.35133967750638 27.760016347996114 10.458165866730642 7 84.2080159231758 5.563344454838424 8.199790719098472 2.0288489028873085 8 86.27128665082758 4.044943713678693 7.7312082202731265 1.95256141522061 9 81.7849280768773 5.569555555450193 9.932498137855141 2.71301822981736 10 53.59174672743746 21.855535489328048 14.549432063597878 10.003285719636608 11 46.95900246879396 19.249291294455002 21.1006259935983 12.691080243152737 12 42.7275360848351 19.94621471348098 25.09905757216137 12.227191629522546 13 20.900969927368056 40.463234314481774 25.139026715792838 13.496769042357334 14 14.339771858214323 42.22021717990429 28.683716058824338 14.756294903057046 15 13.334332166815937 22.912228614018975 49.84441430032426 13.909024918840828 16 15.31339743884555 16.560927815157644 48.9834893773585 19.142185368638305 17 15.679947200903502 17.627245775147728 30.18305678131284 36.50975024263594 18 21.277476415597544 21.328777261871856 36.09867969069667 21.29506663183393 19 27.986365922962435 22.782269630989504 28.066399036188905 21.16496540985915 20 29.850549540165193 21.221576510091616 28.121350682059447 20.806523267683737 21 21.755636336740274 26.723473740557115 30.45236251776209 21.068527404940525 22 21.891711594417977 23.64319455395526 27.812502518814657 26.652591332812108 23 18.262484904891927 29.42748350383832 26.416901400437244 25.893130190832508 24 18.832531184703434 23.206378752915306 40.520746261367854 17.440343801013405 25 16.813876072896512 23.928383639297206 36.87710602538396 22.38063426242232 26 16.595159987995032 32.19047501644045 28.937802228125665 22.27656276743885 27 17.916796854812443 33.35787745356254 29.884212757221352 18.841112934403665 28 14.601491517580497 27.520865267952093 39.152075716635366 18.725567497832042 29 15.097905436704382 22.812424287394737 39.55902133916071 22.530648936740178 30 17.17630090554054 30.167789801183144 33.82939955725758 18.826509736018743 31 28.809787177348735 26.421690111595936 25.836613916563582 18.93190879449175 32 29.13195838847068 25.912853991248515 28.01533525482344 16.939852365457366 33 27.364070537241236 27.46036630321455 26.264516077030926 18.911047082513285 34 19.241894869299003 26.906487850186355 29.768714733631498 24.08290254688314 35 20.638918377129496 25.479736402786557 32.45333258736909 21.428012632714864 36 30.40523401388347 24.46196933612817 26.70213789876096 18.4306587512274 37 20.350789686917857 31.161660725029833 30.396984155055623 18.090565432996687 38 20.00140342426037 32.481732963448856 25.77810629706035 21.738757315230426 39 21.077346219549607 30.895484245377354 28.593015024699792 19.43415451037325 40 24.260890880444848 26.09397158160699 26.110708364171526 23.534429173776637 41 17.274445777802853 25.100479961614454 28.24818040829215 29.376893852290547 42 22.2891272076077 25.393207711057702 25.166431419255453 27.151233662079143 43 22.704654579833267 26.082260575109988 26.026645147494676 25.186439697562076 44 19.360901453539782 30.067843235613594 28.299481254566462 22.271774056280158 45 17.400279831418402 37.8767613330065 23.02649390008283 21.69646493549227 46 21.772230880359505 32.92385901844697 26.725844389645577 18.578065711547953 47 21.884315169261974 27.031658122057134 28.611980217407485 22.472046491273403 48 23.38450932542232 24.098596243848757 32.332382070875774 20.18451235985315 49 21.584997015352798 24.51199003189471 32.71922458913095 21.183788363621538 50 19.761446323526275 32.382687244532924 27.87195839795328 19.98390803398752 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1408.0 1 3167.0 2 4926.0 3 15765.0 4 26604.0 5 19380.0 6 12156.0 7 12157.0 8 12158.0 9 12224.0 10 12290.0 11 11962.0 12 11634.0 13 10982.5 14 10331.0 15 9465.0 16 8599.0 17 7549.5 18 6500.0 19 6950.5 20 7401.0 21 7272.0 22 7143.0 23 7283.0 24 7423.0 25 8933.0 26 10443.0 27 14863.5 28 19284.0 29 27275.0 30 35266.0 31 35245.5 32 35225.0 33 39954.0 34 44683.0 35 46111.5 36 47540.0 37 54358.5 38 61177.0 39 79576.5 40 97976.0 41 132531.0 42 167086.0 43 197657.0 44 228228.0 45 234702.0 46 241176.0 47 217843.5 48 194511.0 49 180828.0 50 167145.0 51 151392.0 52 135639.0 53 127818.0 54 119997.0 55 107744.5 56 95492.0 57 88869.5 58 82247.0 59 74274.0 60 66301.0 61 57675.0 62 49049.0 63 39651.0 64 30253.0 65 24885.0 66 19517.0 67 15466.0 68 11415.0 69 9595.0 70 7775.0 71 6588.5 72 5402.0 73 4244.5 74 3087.0 75 2586.0 76 2085.0 77 1666.0 78 1247.0 79 928.5 80 610.0 81 458.5 82 307.0 83 259.5 84 212.0 85 150.5 86 89.0 87 63.0 88 37.0 89 28.0 90 19.0 91 16.5 92 14.0 93 14.0 94 14.0 95 10.0 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2109127.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.546786368420017 #Duplication Level Percentage of deduplicated Percentage of total 1 80.92256920625306 11.771633266270474 2 7.6038963016014804 2.2122451013403164 3 2.461443350730997 1.0741827174315528 4 1.2249983670129758 0.7127915818640456 5 0.7167671366342638 0.5213329206261379 6 0.5058022800520401 0.4414678627546069 7 0.3504458497434604 0.35685026369422773 8 0.30601240530130497 0.3561197668803555 9 0.24148800846282886 0.3161587022679579 >10 2.9503709778035074 10.25290124226386 >50 0.9202339282457556 9.533288037243082 >100 1.7590573624887558 57.26905493792492 >500 0.032300472460913734 2.972778581476543 >1k 0.00395515989317311 0.9229551423870368 >5k 0.0 0.0 >10k+ 6.591933155288517E-4 1.2862398755749112 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14078 0.6674799573472816 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 12749 0.6044681045759691 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3086 0.1463164617398573 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2171 0.10293358342100783 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03271495742077172 0.0 2 0.0 0.0 0.0 0.10843348930623903 0.0 3 0.0 0.0 0.0 0.15935503172639676 0.0 4 0.0 0.0 0.0 0.23123311208855607 0.0 5 0.0 0.0 0.0 0.3955665069007224 0.0 6 0.0 0.0 0.0 0.5383269950078872 0.0 7 0.0 0.0 0.0 0.6407390356294335 0.0 8 0.0 0.0 0.0 0.8853426085769136 0.0 9 0.0 0.0 0.0 1.0014570009297685 0.0 10 0.0 0.0 0.0 1.2267634902971702 0.0 11 0.0 0.0 0.0 1.4137602903950308 0.0 12 0.0 0.0 0.0 1.5937399691910445 0.0 13 0.0 0.0 0.0 1.659217297014357 0.0 14 0.0 0.0 0.0 1.6845358292791284 0.0 15 0.0 0.0 0.0 1.7221343238221312 0.0 16 0.0 0.0 0.0 1.813309487764369 0.0 17 0.0 0.0 0.0 1.9193249150003768 0.0 18 0.0 0.0 0.0 2.0942314047470827 0.0 19 0.0 0.0 0.0 2.163312119184857 0.0 20 0.0 0.0 0.0 2.2327721374767853 0.0 21 0.0 0.0 0.0 2.327929991887639 0.0 22 0.0 0.0 0.0 2.418773264957492 0.0 23 0.0 0.0 0.0 2.530715314914654 0.0 24 0.0 0.0 0.0 2.6092786257062754 0.0 25 0.0 0.0 0.0 2.6731913251312034 0.0 26 0.0 0.0 0.0 2.7419875616783624 0.0 27 0.0 0.0 0.0 2.8075597154652137 0.0 28 0.0 0.0 0.0 2.8800541645903732 0.0 29 0.0 0.0 0.0 2.956531304184148 0.0 30 0.0 0.0 0.0 3.0552451322276943 0.0 31 0.0 0.0 0.0 3.144002234099701 0.0 32 0.0 0.0 0.0 3.2258844536151687 0.0 33 0.0 0.0 0.0 3.305301198078636 0.0 34 0.0 0.0 0.0 3.396239297112028 0.0 35 0.0 0.0 0.0 3.5176639434230372 0.0 36 0.0 0.0 0.0 3.61225284205266 0.0 37 0.0 0.0 0.0 3.702716811268359 0.0 38 0.0 0.0 0.0 3.795598842554289 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGACG 130 0.0 44.000004 1 GTTACGT 30 2.5287263E-6 44.000004 44 CGTAGCA 30 2.5287263E-6 44.000004 25 CTATTAG 120 0.0 44.000004 1 TACTACC 60 0.0 44.000004 26 ATCGCAC 30 2.5287263E-6 44.000004 43 AGCCGAC 20 7.85798E-4 44.0 24 ATCTCGA 25 4.4441098E-5 44.0 43 ACCGGAT 20 7.85798E-4 44.0 16 CGAGTTA 35 1.4468606E-7 44.0 29 ATCTACG 50 2.7284841E-11 44.0 1 GATCCGT 20 7.85798E-4 44.0 30 CGCGACA 20 7.85798E-4 44.0 26 TATGCGA 35 1.4468606E-7 44.0 39 CCGTCGA 20 7.85798E-4 44.0 35 ACAATCG 20 7.85798E-4 44.0 1 TCCGTTA 35 1.4468606E-7 44.0 34 CGTACTG 20 7.85798E-4 44.0 19 ACTCGAT 25 4.4441098E-5 44.0 25 TCGTAAT 40 8.3182385E-9 44.0 32 >>END_MODULE