##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545809_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1959445 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.77132759531398 31.0 31.0 33.0 30.0 34.0 2 32.18736734126245 33.0 31.0 34.0 31.0 34.0 3 32.25810573912511 34.0 31.0 34.0 30.0 34.0 4 35.947324369910866 37.0 35.0 37.0 35.0 37.0 5 35.93553735879292 37.0 35.0 37.0 35.0 37.0 6 35.992110010742834 37.0 35.0 37.0 35.0 37.0 7 36.15308722622988 37.0 35.0 37.0 35.0 37.0 8 36.11096305331357 37.0 35.0 37.0 35.0 37.0 9 37.93474019428971 39.0 39.0 39.0 35.0 39.0 10 37.691902043690945 39.0 38.0 39.0 35.0 39.0 11 37.390292659401005 39.0 37.0 39.0 35.0 39.0 12 36.220054147985785 37.0 35.0 39.0 33.0 39.0 13 35.854083681858896 37.0 35.0 39.0 33.0 39.0 14 36.7156939847763 38.0 35.0 41.0 33.0 41.0 15 36.97276830939373 38.0 35.0 41.0 33.0 41.0 16 37.13785587245368 38.0 35.0 41.0 33.0 41.0 17 37.0900617266624 38.0 35.0 41.0 33.0 41.0 18 37.04361541150683 38.0 35.0 41.0 33.0 41.0 19 36.97374715799627 37.0 35.0 41.0 33.0 41.0 20 36.81214068269331 37.0 35.0 41.0 33.0 41.0 21 36.662910671133915 36.0 35.0 41.0 33.0 41.0 22 36.65319414426024 37.0 35.0 41.0 33.0 41.0 23 36.66998971647584 36.0 35.0 41.0 33.0 41.0 24 36.652494966686994 36.0 35.0 41.0 33.0 41.0 25 36.543836137273566 36.0 35.0 41.0 33.0 41.0 26 36.4486392830623 36.0 35.0 40.0 33.0 41.0 27 36.35349040161883 36.0 35.0 40.0 32.0 41.0 28 36.39190944374555 36.0 35.0 40.0 32.0 41.0 29 36.39493274881408 36.0 35.0 40.0 32.0 41.0 30 36.33320353467436 36.0 35.0 40.0 32.0 41.0 31 36.11490600654777 36.0 35.0 40.0 32.0 41.0 32 35.91637223805721 36.0 35.0 40.0 31.0 41.0 33 35.75870106075955 36.0 35.0 40.0 31.0 41.0 34 35.58019132968774 36.0 35.0 40.0 30.0 41.0 35 35.39518690241369 36.0 35.0 40.0 30.0 41.0 36 35.21537986521694 36.0 35.0 40.0 29.0 41.0 37 35.13328161800918 35.0 34.0 40.0 29.0 41.0 38 35.12317977794733 35.0 34.0 40.0 29.0 41.0 39 35.121543600356226 35.0 35.0 40.0 29.0 41.0 40 34.94571881323538 35.0 34.0 40.0 28.0 41.0 41 34.88763093631105 35.0 34.0 40.0 28.0 41.0 42 34.87692484351436 35.0 34.0 40.0 28.0 41.0 43 34.80472072449086 35.0 34.0 40.0 28.0 41.0 44 34.71098244656012 35.0 34.0 40.0 27.0 41.0 45 34.59455815294637 35.0 34.0 40.0 27.0 41.0 46 34.56923210398863 35.0 34.0 40.0 27.0 41.0 47 34.533852698085425 35.0 34.0 40.0 27.0 41.0 48 34.516462569758275 35.0 34.0 40.0 27.0 41.0 49 34.507438075577525 35.0 34.0 40.0 27.0 41.0 50 34.2957929413686 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 10.0 13 13.0 14 14.0 15 58.0 16 81.0 17 204.0 18 436.0 19 958.0 20 1852.0 21 3021.0 22 4846.0 23 7336.0 24 11477.0 25 17252.0 26 25538.0 27 31520.0 28 33484.0 29 35460.0 30 39791.0 31 48704.0 32 63068.0 33 88419.0 34 193315.0 35 439136.0 36 98445.0 37 122637.0 38 211901.0 39 480464.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.749477530627296 23.731056498141058 29.927198773121983 13.59226719810967 2 31.021437192674455 25.46838518049754 30.623722533676627 12.886455093151378 3 28.486944007104054 23.36554483539982 33.738073791303144 14.409437366192979 4 25.541722273398843 26.57089124726644 32.24356896978481 15.643817509549898 5 22.201286588804482 33.299990558551016 30.905894271081863 13.592828581562635 6 19.792900540714335 40.39715327554486 28.338228426927014 11.471717756813792 7 86.44483514464555 4.914707991293453 6.970290056623177 1.6701668074378204 8 89.08915534756015 3.186718688199975 6.147761228306995 1.5763647359328792 9 85.46996726113773 4.3664915320409605 7.854315890468985 2.3092253163523346 10 59.3392516758572 20.07726677707208 12.466846479487813 8.116635067582912 11 52.819752531966955 18.090632806738643 19.02589763938258 10.063717021911817 12 48.82964308771106 20.178979251777925 21.465159777385946 9.526217883125069 13 20.584604313976662 47.63068113675046 20.015412527526927 11.769302021745954 14 12.951677643414333 48.30612750038914 25.91631814110628 12.825876715090242 15 10.68481126033137 23.07561579937176 54.76734483488948 11.4722281054074 16 14.110526194917439 16.334370191559344 52.73722916438073 16.817874449142487 17 14.265570097655203 16.419037023238722 29.35076003664303 39.96463284246305 18 20.459007525090012 21.314862116568722 38.0338310082702 20.192299350071067 19 29.4843692984493 23.108686388237484 26.56150083314408 20.84544348016913 20 32.8688991015313 21.751516373258756 26.103156761225755 19.276427763984188 21 21.28332257348382 29.230675012567335 28.930283830370335 20.555718583578514 22 22.464830602543067 24.692706353074467 25.185090676186366 27.6573723681961 23 16.783987302526988 32.336656553258706 25.64547614247912 25.233880001735187 24 17.435447282266153 21.93697705217549 44.63539420601242 15.992181459545943 25 14.436741015950947 25.153602167960827 40.93174342734805 19.477913388740177 26 14.784798756790826 36.49987624046605 28.801675984781404 19.913649017961717 27 15.700262064002818 37.336898968840664 29.285282312083265 17.67755665507325 28 12.506755739507872 28.994536718305437 41.87037656070979 16.628330981476896 29 13.37225591940575 23.906463309763733 41.394323392593314 21.326957378237203 30 16.41444388589626 32.446075291728015 33.22772519769629 17.911755624679436 31 29.8052764941093 26.04191492999293 25.702839324400532 18.449969251497237 32 31.915976207548567 25.78755719093927 27.118546323065974 15.17792027844619 33 29.73974773469018 27.242867240468605 24.87423734782043 18.14314767702079 34 18.113343319154147 26.66801058462983 30.371151014700594 24.84749508151543 35 18.756433581958156 25.695235130355787 34.07709836203619 21.471232925649865 36 32.04672751723064 24.45202595632947 26.108566456317988 17.392680070121898 37 18.763986741143537 34.389482736182956 30.031462990795866 16.81506753187765 38 19.695730168491586 34.35263556772453 24.819017629992164 21.132616633791713 39 18.910303682930625 33.93093452482718 28.3852315323982 18.773530259843987 40 25.065464965844917 25.19483833432426 25.688447494060817 24.051249205770002 41 15.355827798177547 24.86152966783962 27.36999507513607 32.41264745884676 42 21.195950894258324 25.489564647132223 25.12175641571976 28.192728042889698 43 21.809696112929934 26.37353944611867 26.20971754757087 25.607046893380524 44 18.56566527766791 31.3920013064924 29.626654486346897 20.41567892949279 45 15.799933144334238 41.53196440828908 21.143640163413618 21.52446228396306 46 20.89290589937457 34.883296035356956 26.61748607386275 17.60631199140573 47 21.385239187627107 27.090630254995673 27.208265605822056 24.31586495155516 48 22.689894332323693 23.511606602890105 32.75621413206291 21.042284932723295 49 20.386435955079115 23.64725725907081 34.562950223149926 21.40335656270015 50 17.85985317270962 36.11583892377689 26.105198155600185 19.919109747913314 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1301.0 1 2266.5 2 3232.0 3 10579.5 4 17927.0 5 13406.0 6 8885.0 7 9253.0 8 9621.0 9 9961.5 10 10302.0 11 10036.0 12 9770.0 13 8973.5 14 8177.0 15 8196.0 16 8215.0 17 7219.0 18 6223.0 19 5936.0 20 5649.0 21 5866.5 22 6084.0 23 7115.5 24 8147.0 25 9836.5 26 11526.0 27 13920.0 28 16314.0 29 18385.0 30 20456.0 31 25935.5 32 31415.0 33 37794.5 34 44174.0 35 51082.0 36 57990.0 37 63228.5 38 68467.0 39 88155.5 40 107844.0 41 146219.5 42 184595.0 43 216136.0 44 247677.0 45 240742.5 46 233808.0 47 204520.5 48 175233.0 49 166619.0 50 158005.0 51 151491.5 52 144978.0 53 126663.5 54 108349.0 55 93617.5 56 78886.0 57 65985.0 58 53084.0 59 50208.0 60 47332.0 61 38756.5 62 30181.0 63 23203.0 64 16225.0 65 12425.0 66 8625.0 67 6535.0 68 4445.0 69 3414.0 70 2383.0 71 2091.5 72 1800.0 73 1410.5 74 1021.0 75 792.5 76 564.0 77 402.5 78 241.0 79 195.5 80 150.0 81 102.5 82 55.0 83 42.5 84 30.0 85 24.5 86 19.0 87 20.0 88 21.0 89 16.5 90 12.0 91 7.5 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1959445.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.085761284260546 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6256362455252 9.744221930550424 2 8.273216118237595 1.9997623011623247 3 2.5250870801816587 0.9155279901913798 4 1.2349723235773826 0.5970232278169927 5 0.725673244684372 0.4385156802815056 6 0.48112321920887235 0.34888442254040336 7 0.32798660443009037 0.2774777463904085 8 0.27430660986728284 0.26521633644406145 9 0.20734829021107357 0.22553657443715514 >10 2.397593253792749 6.787379172331652 >50 0.8199517741257099 7.176768921085378 >100 1.9742901310820091 60.66836592831679 >500 0.12769040648789115 8.923206004109922 >1k 0.004270582156785657 0.6520816298365673 >5k 8.541164313571315E-4 0.9800321345050451 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 9501 0.4848821987858807 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9487 0.48416771075483106 No Hit TTAGGAGGGACTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATG 2044 0.10431525253324282 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02577260397714659 0.0 2 0.0 0.0 0.0 0.09579243102000821 0.0 3 0.0 0.0 0.0 0.13784515513321374 0.0 4 0.0 0.0 0.0 0.19439177930485418 0.0 5 0.0 0.0 0.0 0.3295831217513122 0.0 6 0.0 0.0 0.0 0.4472184725776942 0.0 7 0.0 0.0 0.0 0.52647560916484 0.0 8 0.0 0.0 0.0 0.7283695127957152 0.0 9 0.0 0.0 0.0 0.8094639043198457 0.0 10 0.0 0.0 0.0 0.9459311182503208 0.0 11 0.0 0.0 0.0 1.0683637458566073 0.0 12 0.0 0.0 0.0 1.184417016042808 0.0 13 0.0 0.0 0.0 1.225602147546882 0.0 14 0.0 0.0 0.0 1.239279489855546 0.0 15 0.0 0.0 0.0 1.2679100459568908 0.0 16 0.0 0.0 0.0 1.3375726289842276 0.0 17 0.0 0.0 0.0 1.4249953430690834 0.0 18 0.0 0.0 0.0 1.5866227426643769 0.0 19 0.0 0.0 0.0 1.6379638111812274 0.0 20 0.0 0.0 0.0 1.6978277012113123 0.0 21 0.0 0.0 0.0 1.7711647941126187 0.0 22 0.0 0.0 0.0 1.8417460046084477 0.0 23 0.0 0.0 0.0 1.9314142525051736 0.0 24 0.0 0.0 0.0 1.996432663330688 0.0 25 0.0 0.0 0.0 2.0483861501598666 0.0 26 0.0 0.0 0.0 2.11034246942374 0.0 27 0.0 0.0 0.0 2.1643883854867068 0.0 28 0.0 0.0 0.0 2.2228743343140533 0.0 29 0.0 0.0 0.0 2.289321721201667 0.0 30 0.0 0.0 0.0 2.382970688128526 0.0 31 0.0 0.0 0.0 2.4732003194782197 0.0 32 0.0 0.0 0.0 2.548170527879068 0.0 33 0.0 0.0 0.0 2.61895587781234 0.0 34 0.0 0.0 0.0 2.697702665805879 0.0 35 0.0 0.0 0.0 2.815593190929064 0.0 36 0.0 0.0 0.0 2.9080683560906277 0.0 37 0.0 0.0 0.0 3.001564218439405 0.0 38 0.0 0.0 0.0 3.0816889476356826 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGAC 65 0.0 44.000004 21 ATCCGAT 75 0.0 44.000004 26 ACTACGG 130 0.0 44.000004 2 ACACTCG 65 0.0 44.000004 1 GCATAAC 35 1.4467878E-7 44.0 9 TCACGAC 200 0.0 44.0 25 TCTGCGA 20 7.857844E-4 44.0 40 TCGCCTA 20 7.857844E-4 44.0 12 AACGTCG 25 4.4439927E-5 44.0 16 AATCCGT 25 4.4439927E-5 44.0 35 GATACGA 35 1.4467878E-7 44.0 18 ATCTCGA 30 2.5286336E-6 44.0 42 TCGTTAG 125 0.0 44.0 1 TCGTTAC 25 4.4439927E-5 44.0 40 AAATCGT 55 1.8189894E-12 44.0 12 CGAACGT 35 1.4467878E-7 44.0 37 ATCTACG 25 4.4439927E-5 44.0 43 GTCGAAG 25 4.4439927E-5 44.0 9 CGAGTAA 20 7.857844E-4 44.0 39 CAACGGC 35 1.4467878E-7 44.0 24 >>END_MODULE