##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545806_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2623404 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.683282864553078 31.0 31.0 33.0 30.0 34.0 2 32.12589368621836 33.0 31.0 34.0 30.0 34.0 3 32.21803580386399 33.0 31.0 34.0 30.0 34.0 4 35.89990752472742 37.0 35.0 37.0 35.0 37.0 5 35.889715423167765 37.0 35.0 37.0 35.0 37.0 6 35.94264741534281 37.0 35.0 37.0 35.0 37.0 7 36.11026589880933 37.0 35.0 37.0 35.0 37.0 8 36.0566306218943 37.0 35.0 37.0 35.0 37.0 9 37.87679747381646 39.0 38.0 39.0 35.0 39.0 10 37.492957622996684 39.0 37.0 39.0 35.0 39.0 11 37.333136642316624 39.0 37.0 39.0 34.0 39.0 12 36.83992972489178 39.0 35.0 39.0 33.0 39.0 13 36.651440647342156 39.0 35.0 39.0 33.0 39.0 14 37.72074678547414 40.0 35.0 41.0 33.0 41.0 15 37.85988128401115 40.0 35.0 41.0 33.0 41.0 16 37.899019365679095 40.0 35.0 41.0 33.0 41.0 17 37.833584152498055 40.0 35.0 41.0 33.0 41.0 18 37.76588699262485 39.0 36.0 41.0 33.0 41.0 19 37.71957350068842 39.0 36.0 41.0 33.0 41.0 20 37.598249068767146 39.0 35.0 41.0 33.0 41.0 21 37.48786957708382 39.0 35.0 41.0 33.0 41.0 22 37.50372836208224 39.0 35.0 41.0 33.0 41.0 23 37.49432531169427 39.0 35.0 41.0 33.0 41.0 24 37.460373240263415 39.0 35.0 41.0 33.0 41.0 25 37.379702478154336 39.0 35.0 41.0 33.0 41.0 26 37.29187231551069 39.0 35.0 41.0 33.0 41.0 27 37.2109732241012 39.0 35.0 41.0 33.0 41.0 28 37.171760049157506 39.0 35.0 41.0 33.0 41.0 29 37.11546181983408 39.0 35.0 41.0 32.0 41.0 30 37.012566878757525 39.0 35.0 41.0 32.0 41.0 31 36.898553558658904 39.0 35.0 41.0 32.0 41.0 32 36.755760454737434 39.0 35.0 41.0 31.0 41.0 33 36.62059484547557 39.0 35.0 41.0 31.0 41.0 34 36.471950946175276 39.0 35.0 41.0 30.0 41.0 35 36.262621769273814 39.0 35.0 41.0 30.0 41.0 36 36.14404796211335 39.0 35.0 41.0 30.0 41.0 37 36.09629778714982 39.0 35.0 41.0 30.0 41.0 38 36.007569173486054 39.0 35.0 41.0 30.0 41.0 39 35.9493158507039 39.0 35.0 41.0 29.0 41.0 40 35.81949368072931 38.0 35.0 41.0 29.0 41.0 41 35.716466849940005 38.0 35.0 41.0 28.0 41.0 42 35.69936578582635 38.0 35.0 41.0 28.0 41.0 43 35.638391570646384 38.0 35.0 40.0 28.0 41.0 44 35.52351753675759 38.0 35.0 40.0 27.0 41.0 45 35.42337855701981 38.0 35.0 40.0 27.0 41.0 46 35.3763785524456 38.0 35.0 40.0 27.0 41.0 47 35.31745663268029 38.0 35.0 40.0 27.0 41.0 48 35.25435998420373 38.0 34.0 40.0 27.0 41.0 49 35.18701961268642 38.0 34.0 40.0 27.0 41.0 50 35.056896307240514 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 5.0 12 10.0 13 10.0 14 21.0 15 48.0 16 151.0 17 287.0 18 719.0 19 1446.0 20 2723.0 21 4321.0 22 6534.0 23 9942.0 24 14534.0 25 22225.0 26 31742.0 27 39570.0 28 42579.0 29 45132.0 30 50000.0 31 59460.0 32 73877.0 33 97795.0 34 178661.0 35 323740.0 36 155017.0 37 211288.0 38 380122.0 39 871443.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.22786120628008 23.695892817118523 29.462065316664916 14.61418065993648 2 30.7788659314387 24.722802892730208 31.17064699146605 13.327684184365046 3 29.480285918600412 24.35549385454928 32.57965604992597 13.584564176924333 4 25.457154140193428 27.182927219749608 32.60389936128785 14.756019278769111 5 22.80064374377717 31.777187196482124 31.060332301086678 14.361836758654023 6 20.197461008674225 41.075716893013805 27.77505866423929 10.951763434072678 7 87.98480904961646 3.6993920875320767 6.708878998431047 1.6069198644204248 8 89.69053184336076 2.5351413659504978 6.273871656824492 1.5004551338642467 9 85.34453709760295 3.771397771749986 8.232281417578077 2.6517837130689745 10 41.514726668099925 24.191851502856593 19.733064369803508 14.560357459239981 11 36.40800273232792 21.767672840325012 24.229436259150326 17.59488816819674 12 34.481231255269876 22.39803705414797 26.465309956072343 16.65542173450982 13 23.695206685664886 31.56845076091978 27.14473256883042 17.591609984584913 14 19.054823427882248 34.091546708017525 29.684676854956383 17.168953009143845 15 18.993300307539364 24.478425739992772 40.10564137281181 16.42263257965605 16 20.688578655822738 21.309794450263855 38.352727982422834 19.648898911490566 17 20.451558357004867 21.551541432429012 30.760797803159555 27.23610240740656 18 22.267443367472183 23.65194228567159 33.920166318264364 20.16044802859186 19 25.68666511143537 24.825722610775923 29.1595194640246 20.3280928137641 20 27.238427630666113 24.4321118668722 28.41979352017455 19.909666982287135 21 23.39288954350912 25.854919791233073 31.583507534485726 19.16868313077208 22 22.891822990282854 23.79827887736696 29.715209704643282 23.594688427706902 23 19.73809600046352 27.918155190736922 29.751345961201555 22.592402847598006 24 19.478204653191046 25.39265778355145 36.663205514667204 18.465932048590304 25 19.201541203718527 26.19463109761211 33.848236870874636 20.75559082779473 26 19.18484533834667 30.056560102828232 29.89604346109101 20.862551097734087 27 18.813838813998913 29.97231840768711 30.812791319979695 20.401051458334287 28 17.13449396280558 27.03174958946468 36.57431337300698 19.259443074722764 29 18.65385583005896 24.63631221115772 35.645367621609175 21.064464337174144 30 19.678898103380188 27.702976743193197 33.12631222640508 19.491812927021535 31 25.0940762459766 26.578292935438082 28.894253420365295 19.433377398220024 32 25.361476920825005 25.90683707122502 29.578174005986114 19.15351200196386 33 23.678320228222567 26.855604397950145 29.040170709505663 20.425904664321624 34 19.996767558485082 26.885946655566585 31.15623823093965 21.961047555008683 35 19.946146304572228 27.1693951827473 31.613887910516258 21.27057060216421 36 24.503164590737835 27.104327049893957 28.77269379782908 19.61981456153913 37 20.48434019312313 30.01127542688812 29.817786356962177 19.686598023026573 38 20.831027169280826 30.133444944049792 28.55195006182807 20.483577824841312 39 20.786619216864807 29.69355844543959 28.000147899446677 21.51967443824893 40 22.873564269933265 26.542347270950263 28.63462890199146 21.949459557125017 41 19.388054603865818 26.64995555392917 28.881598106887086 25.08039173531793 42 21.513956676135283 27.854726149689483 26.89787771917707 23.733439454998162 43 21.427161047250063 27.48875125600174 28.254588313504136 22.82949938324406 44 20.456475632422606 29.086446464212145 29.290075032286296 21.16700287107895 45 18.706802307231367 32.19626104099864 27.019132394400557 22.077804257369433 46 20.935281031819727 30.192680959547214 28.46980487946195 20.40223312917111 47 20.78669545369299 28.496144703598837 29.798803386744854 20.918356455963323 48 21.244955027895056 26.63325968855731 30.697368762112127 21.42441652143551 49 20.62183331274939 27.079702554391165 31.097002215442227 21.20146191741722 50 19.819364459305543 30.638170865028798 29.10371410579537 20.43875056987029 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1043.0 1 2993.0 2 4943.0 3 15670.5 4 26398.0 5 19400.0 6 12402.0 7 12229.0 8 12056.0 9 11976.0 10 11896.0 11 11363.0 12 10830.0 13 10052.5 14 9275.0 15 8755.0 16 8235.0 17 8012.5 18 7790.0 19 7792.0 20 7794.0 21 8475.5 22 9157.0 23 10736.0 24 12315.0 25 15168.0 26 18021.0 27 22837.0 28 27653.0 29 30742.0 30 33831.0 31 41059.5 32 48288.0 33 64308.0 34 80328.0 35 85663.5 36 90999.0 37 98801.0 38 106603.0 39 124098.0 40 141593.0 41 168298.0 42 195003.0 43 216523.5 44 238044.0 45 242641.5 46 247239.0 47 243410.5 48 239582.0 49 235092.5 50 230603.0 51 218597.5 52 206592.0 53 185039.5 54 163487.0 55 146780.5 56 130074.0 57 115093.0 58 100112.0 59 85549.5 60 70987.0 61 60073.5 62 49160.0 63 39657.5 64 30155.0 65 23394.0 66 16633.0 67 12997.0 68 9361.0 69 7663.5 70 5966.0 71 4868.0 72 3770.0 73 3121.0 74 2472.0 75 1847.0 76 1222.0 77 938.0 78 654.0 79 538.0 80 422.0 81 324.0 82 226.0 83 152.0 84 78.0 85 60.5 86 43.0 87 35.5 88 28.0 89 22.0 90 16.0 91 12.5 92 9.0 93 10.0 94 11.0 95 7.5 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2623404.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.803121896030538 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27058797992464 11.734521766368378 2 7.180048280782813 2.12574259839625 3 2.338692750743907 1.0385986159987504 4 1.2171491570089186 0.7207042934741533 5 0.7643958167133161 0.5657722225811518 6 0.5638369435173421 0.5007928202623501 7 0.447791886639963 0.46401025173894034 8 0.3754254436517998 0.444597488419915 9 0.3094990801254625 0.4123397348825889 >10 4.010292973548055 14.299678027156235 >50 1.4749331607086684 15.903563563994613 >100 2.0416247756755035 50.64107264197757 >500 0.004681432603318634 0.4296203684462621 >1k 7.802387672197724E-4 0.24535985376001693 >5k 0.0 0.0 >10k+ 2.6007958907325743E-4 0.4736257525428727 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12302 0.46893273014754877 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3925 0.1496147753071963 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019021088631411706 0.0 2 0.0 0.0 0.0 0.07364477602382248 0.0 3 0.0 0.0 0.0 0.10585483593072206 0.0 4 0.0 0.0 0.0 0.1503390251749254 0.0 5 0.0 0.0 0.0 0.27788323872342957 0.0 6 0.0 0.0 0.0 0.39220036258235486 0.0 7 0.0 0.0 0.0 0.4819692277666726 0.0 8 0.0 0.0 0.0 0.6870462955762818 0.0 9 0.0 0.0 0.0 0.7767008055183265 0.0 10 0.0 0.0 0.0 0.9471663533333028 0.0 11 0.0 0.0 0.0 1.0786367635331806 0.0 12 0.0 0.0 0.0 1.2060666218394116 0.0 13 0.0 0.0 0.0 1.249750324387704 0.0 14 0.0 0.0 0.0 1.2659887687904723 0.0 15 3.8118414091005426E-5 0.0 0.0 1.2908038563637168 0.0 16 3.8118414091005426E-5 0.0 0.0 1.3532037002306927 0.0 17 3.8118414091005426E-5 0.0 0.0 1.4310415018045257 0.0 18 3.8118414091005426E-5 0.0 0.0 1.5449393231084498 0.0 19 3.8118414091005426E-5 0.0 0.0 1.5957892875058513 0.0 20 3.8118414091005426E-5 0.0 0.0 1.6534243296114515 0.0 21 3.8118414091005426E-5 0.0 0.0 1.7329774598193797 0.0 22 3.8118414091005426E-5 0.0 0.0 1.8164567866786816 0.0 23 3.8118414091005426E-5 0.0 0.0 1.9082078093957318 0.0 24 3.8118414091005426E-5 0.0 0.0 1.9819288222477363 0.0 25 3.8118414091005426E-5 0.0 0.0 2.043566297832892 0.0 26 3.8118414091005426E-5 0.0 0.0 2.10871066751442 0.0 27 3.8118414091005426E-5 0.0 0.0 2.177590641776867 0.0 28 3.8118414091005426E-5 0.0 0.0 2.2454795372729475 0.0 29 3.8118414091005426E-5 0.0 0.0 2.330597955938163 0.0 30 3.8118414091005426E-5 0.0 0.0 2.424483609844309 0.0 31 3.8118414091005426E-5 0.0 0.0 2.508344120844521 0.0 32 3.8118414091005426E-5 0.0 0.0 2.5832468045333465 0.0 33 3.8118414091005426E-5 0.0 0.0 2.66222815852991 0.0 34 3.8118414091005426E-5 0.0 0.0 2.749176261071493 0.0 35 3.8118414091005426E-5 0.0 0.0 2.851295492421297 0.0 36 3.8118414091005426E-5 0.0 0.0 2.943351462451075 0.0 37 3.8118414091005426E-5 0.0 0.0 3.0371989979431304 0.0 38 3.8118414091005426E-5 0.0 0.0 3.146293899071588 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGA 20 7.8583293E-4 44.000004 21 TATCGGC 40 8.3200575E-9 44.000004 15 GCGTAGT 20 7.8583293E-4 44.000004 29 CGTATAT 25 4.4444063E-5 44.0 14 CGACGGT 375 0.0 42.24 28 CGTTTTT 8905 0.0 40.887142 1 AATCGTC 55 7.8216544E-11 40.0 43 TGTTACG 150 0.0 39.6 1 CATACGA 460 0.0 39.217392 18 GGGCGAT 3290 0.0 38.784195 7 CAATACG 40 4.1272324E-7 38.500004 1 GCGCGAC 460 0.0 38.26087 9 AACGGGA 675 0.0 38.133335 4 GACCGAT 1085 0.0 37.917053 9 TCACGAC 430 0.0 37.860466 25 GTTAGCG 215 0.0 37.860466 1 TATTACG 35 7.29378E-6 37.714287 1 AGCGATA 35 7.29378E-6 37.714287 43 ACGCGGT 70 0.0 37.714287 3 GCGATTT 345 0.0 37.623188 9 >>END_MODULE