##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545805_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2456353 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.724946699436114 31.0 31.0 33.0 30.0 34.0 2 32.16099396137282 33.0 31.0 34.0 30.0 34.0 3 32.22471525875963 34.0 31.0 34.0 30.0 34.0 4 35.92107608311998 37.0 35.0 37.0 35.0 37.0 5 35.9089670743578 37.0 35.0 37.0 35.0 37.0 6 35.95048757242953 37.0 35.0 37.0 35.0 37.0 7 36.10220517979297 37.0 35.0 37.0 35.0 37.0 8 36.046118371423 37.0 35.0 37.0 35.0 37.0 9 37.809102763324326 39.0 38.0 39.0 35.0 39.0 10 37.59244579260391 39.0 37.0 39.0 35.0 39.0 11 37.34730309527987 39.0 37.0 39.0 35.0 39.0 12 36.594519191663416 39.0 35.0 39.0 33.0 39.0 13 36.37224820699631 38.0 35.0 39.0 33.0 39.0 14 37.42263143774531 39.0 35.0 41.0 33.0 41.0 15 37.59082224745385 40.0 35.0 41.0 33.0 41.0 16 37.66760966359477 40.0 35.0 41.0 33.0 41.0 17 37.60458167046837 39.0 35.0 41.0 33.0 41.0 18 37.54188547004441 39.0 35.0 41.0 33.0 41.0 19 37.44069683795448 39.0 35.0 41.0 33.0 41.0 20 37.283964071939174 39.0 35.0 41.0 33.0 41.0 21 37.16676634017993 38.0 35.0 41.0 33.0 41.0 22 37.17079955527564 39.0 35.0 41.0 33.0 41.0 23 37.15292468142812 38.0 35.0 41.0 33.0 41.0 24 37.118083190811745 38.0 35.0 41.0 33.0 41.0 25 37.022046098423154 38.0 35.0 41.0 33.0 41.0 26 36.938006467311496 38.0 35.0 41.0 33.0 41.0 27 36.837566099009386 38.0 35.0 41.0 33.0 41.0 28 36.81391640370908 38.0 35.0 41.0 32.0 41.0 29 36.78858657530086 38.0 35.0 41.0 32.0 41.0 30 36.688165748164046 38.0 35.0 41.0 32.0 41.0 31 36.53026254776899 38.0 35.0 41.0 32.0 41.0 32 36.345618483988254 38.0 35.0 41.0 31.0 41.0 33 36.19636102791415 38.0 35.0 41.0 31.0 41.0 34 35.99048426671574 38.0 35.0 41.0 30.0 41.0 35 35.78060848746088 38.0 35.0 41.0 30.0 41.0 36 35.61407379151124 38.0 35.0 40.0 29.0 41.0 37 35.53828663876894 38.0 35.0 40.0 29.0 41.0 38 35.4916394345601 38.0 35.0 40.0 29.0 41.0 39 35.450733668979986 38.0 35.0 40.0 29.0 41.0 40 35.283348118124714 37.0 35.0 40.0 27.0 41.0 41 35.20239517691472 37.0 34.0 40.0 27.0 41.0 42 35.17239582421582 37.0 35.0 40.0 27.0 41.0 43 35.08608249710038 37.0 34.0 40.0 27.0 41.0 44 34.97848761965402 37.0 34.0 40.0 27.0 41.0 45 34.88842890252337 37.0 34.0 40.0 26.0 41.0 46 34.83438862411062 36.0 34.0 40.0 26.0 41.0 47 34.80263300918068 36.0 34.0 40.0 26.0 41.0 48 34.74553738815227 36.0 34.0 40.0 26.0 41.0 49 34.67192419004923 36.0 34.0 40.0 26.0 41.0 50 34.50625378355635 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 6.0 11 7.0 12 9.0 13 13.0 14 25.0 15 59.0 16 135.0 17 312.0 18 675.0 19 1506.0 20 2665.0 21 4329.0 22 6484.0 23 9921.0 24 14566.0 25 22129.0 26 32373.0 27 40479.0 28 42293.0 29 44003.0 30 48444.0 31 58001.0 32 73020.0 33 98973.0 34 197623.0 35 409928.0 36 139789.0 37 182030.0 38 307301.0 39 719252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.68202900804567 23.459046806383284 29.465512489450823 14.393411696120223 2 31.882103264473795 25.69826079557783 29.389016969466525 13.03061897048185 3 28.454012920781334 24.54117954544807 32.79361720404192 14.211190329728668 4 26.634771142421304 27.757614642520846 31.17878415683739 14.42883005822046 5 23.11756494282377 32.15356261905353 30.777620317600928 13.951252120521765 6 21.168374415240805 40.08304181035869 28.487599298635008 10.260984475765495 7 85.52581815398682 5.054525957791897 7.550543427593673 1.8691124606276053 8 86.59602264006843 4.24206129982132 7.492204907030871 1.6697111530793822 9 82.01630628822485 6.30878379451162 8.980427487417321 2.694482429846199 10 49.082766198506484 25.977984434647627 14.851611311566376 10.087638055279514 11 43.227866678771335 19.94851717159545 23.80602462268249 13.017591526950728 12 40.74593513228758 21.517347058830712 25.767916907708297 11.968800901173406 13 21.58419412844978 39.329037805234016 24.545413464595683 14.541354601720519 14 14.991778461809032 39.11465493762501 29.12496697339511 16.76859962717085 15 14.737295494580788 23.58325533830032 46.42553411500708 15.253915052111811 16 16.013944249869624 19.263151509575373 44.307393929129894 20.41551031142511 17 16.094632978240504 20.943732435851036 30.524440094725797 32.43719449118266 18 20.847980725897294 24.33135628307495 34.867382660391236 19.953280330636517 19 26.408744997156354 25.06301008039154 27.11723437144417 21.411010551007937 20 29.061865293791243 21.5475544435185 28.543576595057797 20.84700366763246 21 20.85066763612559 27.958359405183213 29.576367891748458 21.61460506694274 22 22.65472430061966 25.114997722232918 26.4330493214941 25.79722865565332 23 19.028250418404845 29.257602632846336 27.64004196465247 24.07410498409634 24 18.841143760689118 23.78086537236301 40.23660280098178 17.14138806596609 25 16.588820906441377 27.807444614027382 35.36840999644595 20.23532448308529 26 16.923544783669122 32.34868929669311 28.854688230885383 21.87307768875239 27 17.56929887520238 32.5673875049718 30.181777619096277 19.681536000729537 28 14.82519002765482 27.99052090640067 37.78076685232131 19.403522213623205 29 15.571621831227025 23.619162229532968 37.52754591868514 23.281670020554863 30 17.937934816372078 30.896780715149653 32.11049063387876 19.054793834599508 31 27.095169138963332 28.53926125438811 25.550440022260645 18.81512958438791 32 27.3579978122037 26.59157702496343 27.709331679933623 18.34109348289924 33 26.25009516140392 28.845039780520143 25.928358016946262 18.976507041129675 34 18.494369498195088 27.586018784759357 30.454946825639475 23.46466489140608 35 21.409707806654826 25.425742961211196 31.53777164764185 21.62677758449213 36 27.0732260387656 27.839158296873457 26.326794235193397 18.76082142916755 37 19.551261565418326 33.32721314892444 29.022457277109602 18.09906800854763 38 19.95584510858171 31.830522730242762 27.234807049312536 20.978825111862996 39 20.718927613417126 31.85193659054704 27.825968010298197 19.603167785737636 40 23.92380085435603 28.15975554002214 25.858091243400278 22.05835236222155 41 18.501453170615136 26.04878044808706 28.30545935376552 27.14430702753228 42 21.015912615165654 26.62394207998606 25.157866153602516 27.20227915124577 43 21.74923555368467 27.018307222129717 26.467246360763298 24.76521086342232 44 18.838701115027035 30.763534394282903 27.87270396396609 22.52506052672397 45 17.115984551080402 37.0000158771968 24.12051525167596 21.76348432004683 46 20.290243299721173 34.35475275744162 26.449781444279385 18.905222498557823 47 21.070790721040503 27.519823087316848 29.50052374394071 21.90886244770194 48 21.583298491707016 24.87142523896199 32.3513762069214 21.193900062409597 49 19.86090761384866 26.24744896193666 32.447779289051695 21.443864135162983 50 19.116470637567158 32.53152132450018 29.23313546546445 19.118872572468206 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1167.0 1 3287.5 2 5408.0 3 17278.5 4 29149.0 5 21250.5 6 13352.0 7 12946.5 8 12541.0 9 12533.5 10 12526.0 11 12183.5 12 11841.0 13 11310.0 14 10779.0 15 10339.0 16 9899.0 17 8608.5 18 7318.0 19 7383.5 20 7449.0 21 7867.5 22 8286.0 23 9288.5 24 10291.0 25 12008.5 26 13726.0 27 21695.5 28 29665.0 29 39701.0 30 49737.0 31 56771.0 32 63805.0 33 66849.5 34 69894.0 35 77019.0 36 84144.0 37 87594.5 38 91045.0 39 106817.5 40 122590.0 41 157860.0 42 193130.0 43 213221.0 44 233312.0 45 244709.5 46 256107.0 47 231526.5 48 206946.0 49 200207.5 50 193469.0 51 183124.0 52 172779.0 53 155077.0 54 137375.0 55 124754.0 56 112133.0 57 97670.0 58 83207.0 59 74163.0 60 65119.0 61 57634.0 62 50149.0 63 42742.0 64 35335.0 65 28264.5 66 21194.0 67 15949.5 68 10705.0 69 9354.5 70 8004.0 71 6668.0 72 5332.0 73 4136.5 74 2941.0 75 2622.5 76 2304.0 77 1726.5 78 1149.0 79 819.5 80 490.0 81 355.5 82 221.0 83 183.5 84 146.0 85 128.5 86 111.0 87 72.5 88 34.0 89 28.0 90 22.0 91 19.5 92 17.0 93 10.0 94 3.0 95 3.0 96 3.0 97 2.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2456353.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.846707285017997 #Duplication Level Percentage of deduplicated Percentage of total 1 80.50175083893357 11.146841797981653 2 7.47989423323271 2.07143811940935 3 2.48176421843068 1.030927880491233 4 1.2593259776423298 0.6975007275532985 5 0.7163442226237027 0.49595043829920893 6 0.518912971534494 0.431114161394221 7 0.41449852934784753 0.4017607864165061 8 0.3156002690092549 0.34960196352352724 9 0.2633574933383831 0.32819707094154016 >10 3.1477504105257035 10.28971373779454 >50 0.9970578614630283 9.851713392702646 >100 1.86123278571249 57.369437539955385 >500 0.03805107755485844 3.244811847269075 >1k 0.0032700144773706473 0.8118512738165897 >5k 8.918221301919947E-4 0.8766413110820825 >10k+ 2.9727404339733156E-4 0.6024979513691338 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14637 0.5958834092656877 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 8278 0.33700367984568996 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 7751 0.3155491087803748 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 5268 0.21446428913108173 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3800 0.15470089193206352 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3479 0.1416327376399076 No Hit GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAAC 2601 0.10588868945139399 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01933761149150794 0.0 2 0.0 0.0 0.0 0.07336079138462591 0.0 3 0.0 0.0 0.0 0.10434168053207336 0.0 4 0.0 0.0 0.0 0.15518942106448055 0.0 5 0.0 0.0 0.0 0.2725178343666403 0.0 6 0.0 0.0 0.0 0.3818262277449536 0.0 7 0.0 0.0 0.0 0.46060155034720174 0.0 8 0.0 0.0 0.0 0.6873197785497442 0.0 9 0.0 0.0 0.0 0.8003735619432549 0.0 10 0.0 0.0 0.0 0.9819435561582558 0.0 11 0.0 0.0 0.0 1.1212150696581478 0.0 12 0.0 0.0 0.0 1.2532400676938535 0.0 13 0.0 0.0 0.0 1.3047391804028168 0.0 14 0.0 0.0 0.0 1.3216341462322394 0.0 15 0.0 0.0 0.0 1.3486660915593158 0.0 16 0.0 0.0 0.0 1.4144546813914776 0.0 17 0.0 0.0 0.0 1.4937999546482121 0.0 18 0.0 0.0 0.0 1.6200847353780177 0.0 19 0.0 0.0 0.0 1.6734565430945796 0.0 20 0.0 0.0 0.0 1.7338306017091192 0.0 21 0.0 0.0 0.0 1.8104889647375602 0.0 22 0.0 0.0 0.0 1.8903634778877465 0.0 23 0.0 0.0 0.0 1.977688060307293 0.0 24 0.0 0.0 0.0 2.0462042711287833 0.0 25 0.0 0.0 0.0 2.1018151707022565 0.0 26 0.0 0.0 0.0 2.1574667810367645 0.0 27 0.0 0.0 0.0 2.2179222611733738 0.0 28 8.142152206950711E-5 0.0 0.0 2.2825302389355278 0.0 29 1.2213228310426066E-4 0.0 0.0 2.3514128466063307 0.0 30 1.2213228310426066E-4 0.0 0.0 2.4414243392541706 0.0 31 1.2213228310426066E-4 0.0 0.0 2.521298852404357 0.0 32 1.2213228310426066E-4 0.0 0.0 2.5992599597859103 0.0 33 1.2213228310426066E-4 0.0 0.0 2.674330603133996 0.0 34 1.2213228310426066E-4 0.0 0.0 2.754408670089356 0.0 35 1.2213228310426066E-4 0.0 0.0 2.863432088140426 0.0 36 1.2213228310426066E-4 0.0 0.0 2.953972820681718 0.0 37 1.2213228310426066E-4 0.0 0.0 3.0395875511378048 0.0 38 1.2213228310426066E-4 0.0 0.0 3.129802597590819 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGC 20 7.8582315E-4 44.000004 8 ATAGCCG 20 7.8582315E-4 44.000004 15 ACGATTC 20 7.8582315E-4 44.000004 15 CCCGTAG 20 7.8582315E-4 44.000004 42 TACGAAC 20 7.8582315E-4 44.000004 34 TCTAACG 40 8.3200575E-9 44.000004 19 CGTAATA 20 7.8582315E-4 44.000004 27 CGCGTAC 20 7.8582315E-4 44.000004 26 GTGCGTA 55 1.8189894E-12 44.000004 16 TGTAACG 55 1.8189894E-12 44.000004 1 TACCGGT 40 8.3200575E-9 44.000004 17 CTATCGA 30 2.5288973E-6 44.0 11 GTAATCG 25 4.4443237E-5 44.0 41 CTACGTC 30 2.5288973E-6 44.0 16 CGTAGCA 30 2.5288973E-6 44.0 15 ACGTGTA 35 1.4469879E-7 44.0 22 GTCGTAC 35 1.4469879E-7 44.0 39 TATTACG 25 4.4443237E-5 44.0 1 CGTACAG 25 4.4443237E-5 44.0 10 ACATCGG 35 1.4469879E-7 44.0 32 >>END_MODULE