##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545804_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1193515 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.736439005793812 31.0 31.0 33.0 30.0 34.0 2 32.15211874169994 33.0 31.0 34.0 30.0 34.0 3 32.18744632451205 33.0 31.0 34.0 30.0 34.0 4 35.86058658667884 37.0 35.0 37.0 35.0 37.0 5 35.82830462960248 37.0 35.0 37.0 35.0 37.0 6 35.87985236884329 37.0 35.0 37.0 35.0 37.0 7 36.12572359794389 37.0 35.0 37.0 35.0 37.0 8 36.104133588601734 37.0 35.0 37.0 35.0 37.0 9 37.937374058977056 39.0 39.0 39.0 35.0 39.0 10 37.65840312019539 39.0 38.0 39.0 35.0 39.0 11 37.272634193956506 39.0 37.0 39.0 34.0 39.0 12 35.938288165628414 37.0 35.0 39.0 33.0 39.0 13 35.50282903859608 35.0 35.0 39.0 32.0 39.0 14 36.27318299309184 37.0 35.0 41.0 32.0 41.0 15 36.585595488954894 37.0 35.0 41.0 33.0 41.0 16 36.79271898551757 36.0 35.0 41.0 33.0 41.0 17 36.76862796026862 36.0 35.0 41.0 33.0 41.0 18 36.74042219829663 36.0 35.0 40.0 33.0 41.0 19 36.6678123023171 36.0 35.0 40.0 33.0 41.0 20 36.44366178891761 36.0 35.0 40.0 33.0 41.0 21 36.285713208464074 35.0 35.0 40.0 32.0 41.0 22 36.258804455746265 35.0 35.0 40.0 32.0 41.0 23 36.27890893704729 35.0 35.0 40.0 32.0 41.0 24 36.23644528975338 35.0 35.0 40.0 32.0 41.0 25 36.14156168963105 35.0 35.0 40.0 32.0 41.0 26 36.04435051088591 35.0 35.0 40.0 32.0 41.0 27 35.949037087929355 35.0 35.0 40.0 32.0 41.0 28 36.00787505812663 36.0 35.0 40.0 32.0 41.0 29 36.04799772101733 36.0 35.0 40.0 32.0 41.0 30 35.980001089219655 36.0 35.0 40.0 32.0 41.0 31 35.73173525259423 35.0 35.0 40.0 31.0 41.0 32 35.49610352613918 35.0 35.0 40.0 31.0 41.0 33 35.350688512502984 35.0 35.0 40.0 30.0 41.0 34 35.22318697293289 35.0 35.0 40.0 30.0 41.0 35 35.02800132382082 35.0 35.0 40.0 29.0 41.0 36 34.83742391172294 35.0 34.0 40.0 29.0 41.0 37 34.71061695915007 35.0 34.0 40.0 27.0 41.0 38 34.68356158070908 35.0 34.0 40.0 28.0 41.0 39 34.69840596892372 35.0 34.0 40.0 28.0 41.0 40 34.49739383250315 35.0 34.0 40.0 27.0 41.0 41 34.47774682345844 35.0 34.0 40.0 27.0 41.0 42 34.44603796349438 35.0 34.0 40.0 27.0 41.0 43 34.37445528543839 35.0 34.0 40.0 27.0 41.0 44 34.25366585254479 35.0 34.0 40.0 26.0 41.0 45 34.14315278819286 35.0 34.0 40.0 26.0 41.0 46 34.15737715906377 35.0 34.0 40.0 26.0 41.0 47 34.119509180864924 35.0 34.0 39.0 26.0 41.0 48 34.112899293264014 35.0 34.0 39.0 26.0 41.0 49 34.104994909992755 35.0 34.0 39.0 26.0 41.0 50 33.85909603147007 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 1.0 14 5.0 15 17.0 16 61.0 17 161.0 18 381.0 19 854.0 20 1554.0 21 2468.0 22 3831.0 23 5660.0 24 8149.0 25 12072.0 26 17245.0 27 21480.0 28 22460.0 29 23196.0 30 26663.0 31 31845.0 32 40497.0 33 56137.0 34 123655.0 35 298928.0 36 57451.0 37 67147.0 38 114295.0 39 257299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.58727372508934 22.87595882749693 30.062127413564138 14.474640033849596 2 30.63195686690155 25.55803655588744 30.94154660812809 12.868459969082918 3 27.580298529972392 25.006304906096698 32.682287193709335 14.731109370221574 4 24.976309472440647 26.660661994193624 33.352157283318604 15.010871250047131 5 22.566117727887793 32.46042152800761 30.8745177061034 14.098943038001199 6 20.237701243805063 40.235020087724074 28.392772608639188 11.134506059831674 7 86.29451661688374 5.118159386350403 7.021277487086463 1.5660465096793925 8 89.46565397167191 2.97172637126471 6.203692454640286 1.3589272024230947 9 86.6733974855783 3.78855732856311 7.5189670846198 2.019078101238778 10 63.75060221279163 18.352680946615667 10.74934123157229 7.147375609020415 11 57.51716568287789 15.108565874748118 17.938693690485668 9.43557475188833 12 51.30232967327599 19.67717205062358 19.79648349622753 9.224014779872897 13 20.178548237768272 50.220315622342405 20.059739508929507 9.541396630959811 14 11.835041872117232 51.35385814170748 26.182075633737323 10.629024352437968 15 10.433635103035991 20.69106797987457 58.62775080329949 10.24754611378994 16 11.515062651076862 14.419676334189349 56.19820446328701 17.867056551446776 17 12.112038809734273 13.747962949774406 30.61251848531439 43.527479755176934 18 20.86442147773593 19.679266703811848 38.563486843483325 20.892824974968892 19 30.55856021918451 21.56671679869964 26.482113756425345 21.392609225690503 20 33.261500693330206 20.232757862280742 24.99013418348324 21.51560726090581 21 19.836784623569876 27.92842988986314 30.02090463881895 22.213880847748037 22 22.211451050049643 24.098398428172246 25.993305488410286 27.696845033367822 23 16.03415122558158 31.881040456131675 24.768771234546698 27.316037083740046 24 17.57933498950579 21.799977377745567 45.234957248128424 15.385730384620219 25 12.351583348345015 24.027096433643482 42.912238220717796 20.70908199729371 26 13.46836864220391 37.05768255949862 29.62643955040364 19.84750924789383 27 14.42939552498293 37.04913637449047 29.64621307650092 18.875255024025673 28 11.370280222703528 28.341327926335236 43.778838137769526 16.509553713191707 29 11.900227479336246 23.054758423647797 43.59367079592632 21.45134330108964 30 15.436923708541578 32.28338144053489 34.089056274952554 18.190638575970976 31 31.87324834627131 26.488649074372756 23.74507232837459 17.893030250981347 32 31.753936900667355 26.109684419550653 27.338407979790784 14.797970699991204 33 28.469855845967583 27.947784485322764 25.317151439236206 18.265208229473444 34 17.823236406748137 27.467941332953504 30.189817471921177 24.519004788377188 35 18.480119646590115 25.848941990674607 33.88486948215984 21.786068880575442 36 33.685877429274036 22.373577206821864 26.941429307549548 16.99911605635455 37 18.443505108859128 33.804099655220085 30.674185075177103 17.078210160743687 38 19.943276791661603 34.711419630251825 23.562250998102243 21.783052579984332 39 19.89426190705605 33.193717716157735 27.939322086442147 18.972698290344066 40 24.415780279259163 25.37404221982966 23.963418976720025 26.24675852419115 41 15.176767782558242 23.931831606640888 27.375273875904366 33.5161267348965 42 21.976347176198036 24.921848489545585 23.761997126135824 29.33980720812055 43 23.362923800706316 25.503910717502503 26.347720807865844 24.78544467392534 44 18.5574542423011 31.60245158209155 29.14869105122265 20.691403124384696 45 14.658466797652311 42.41857035730594 20.880257055839266 22.042705789202483 46 21.890717753861495 34.3714993108591 26.133563465896952 17.604219469382453 47 21.560097694624698 28.16713656719857 26.924588295915846 23.348177442260884 48 23.618722848058045 22.820324838816436 32.51069320452613 21.05025910859939 49 20.295932602439017 23.80120903382027 34.19672144882972 21.706136914911 50 19.221459302983206 36.19946125519998 25.730971123111146 18.848108318705673 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 790.0 1 1210.5 2 1631.0 3 5851.0 4 10071.0 5 7531.5 6 4992.0 7 5333.5 8 5675.0 9 6038.5 10 6402.0 11 6353.0 12 6304.0 13 5985.0 14 5666.0 15 5045.0 16 4424.0 17 4289.0 18 4154.0 19 4105.0 20 4056.0 21 3573.0 22 3090.0 23 3179.0 24 3268.0 25 4407.0 26 5546.0 27 6130.0 28 6714.0 29 7877.5 30 9041.0 31 11118.0 32 13195.0 33 17276.5 34 21358.0 35 24329.5 36 27301.0 37 30699.5 38 34098.0 39 46009.0 40 57920.0 41 89638.5 42 121357.0 43 144365.5 44 167374.0 45 165903.5 46 164433.0 47 142901.5 48 121370.0 49 109324.0 50 97278.0 51 91247.0 52 85216.0 53 75631.0 54 66046.0 55 57446.5 56 48847.0 57 40693.5 58 32540.0 59 26188.5 60 19837.0 61 16708.0 62 13579.0 63 10703.5 64 7828.0 65 6505.5 66 5183.0 67 3833.5 68 2484.0 69 2131.0 70 1778.0 71 1526.0 72 1274.0 73 935.5 74 597.0 75 460.5 76 324.0 77 225.0 78 126.0 79 155.5 80 185.0 81 134.0 82 83.0 83 56.5 84 30.0 85 30.5 86 31.0 87 24.5 88 18.0 89 9.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1193515.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.496477538364338 #Duplication Level Percentage of deduplicated Percentage of total 1 80.04868395878717 11.604239489841838 2 7.900244347243526 2.290514294548112 3 2.5438988725934415 1.1063271859926358 4 1.265972722489044 0.7340858054297751 5 0.7646091967437665 0.5542070023111406 6 0.5028327627125965 0.4373582310130104 7 0.38926841031654646 0.39501145365840257 8 0.31583075136844185 0.3662746714509879 9 0.2661522997460718 0.34724437515476475 >10 3.003754618883946 10.194989199094548 >50 0.9717475027007051 10.128018414276415 >100 2.003645241445985 58.89499089427896 >500 0.022191349220328605 1.9158713492050012 >1k 0.0 0.0 >5k 0.0011679657484383475 1.0308676337443903 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 6198 0.5193064184362995 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5979 0.5009572565070401 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034687456797777995 0.0 2 0.0 0.0 0.0 0.13682274625790208 0.0 3 0.0 0.0 0.0 0.18935664821975426 0.0 4 0.0 0.0 0.0 0.27607529021419924 0.0 5 0.0 0.0 0.0 0.4723024008914844 0.0 6 0.0 0.0 0.0 0.6352664189390163 0.0 7 0.0 0.0 0.0 0.7580968818992639 0.0 8 0.0 0.0 0.0 1.058386362969883 0.0 9 0.0 0.0 0.0 1.1827249762256864 0.0 10 0.0 0.0 0.0 1.3772763643523542 0.0 11 0.0 0.0 0.0 1.5638680703635899 0.0 12 0.0 0.0 0.0 1.7307700364050724 0.0 13 8.378612753086472E-5 0.0 0.0 1.8008990251484063 0.0 14 8.378612753086472E-5 0.0 0.0 1.8245267131121101 0.0 15 8.378612753086472E-5 0.0 0.0 1.8651629849645794 0.0 16 8.378612753086472E-5 0.0 0.0 1.9600088813295182 0.0 17 8.378612753086472E-5 0.0 0.0 2.0845988529679143 0.0 18 8.378612753086472E-5 0.0 0.0 2.2818313971755697 0.0 19 8.378612753086472E-5 0.0 0.0 2.354055039107175 0.0 20 8.378612753086472E-5 0.0 0.0 2.430970704180509 0.0 21 8.378612753086472E-5 0.0 0.0 2.5378818029098924 0.0 22 8.378612753086472E-5 0.0 0.0 2.6423631039408804 0.0 23 8.378612753086472E-5 0.0 0.0 2.7749127576947084 0.0 24 8.378612753086472E-5 0.0 0.0 2.8638936251324867 0.0 25 8.378612753086472E-5 0.0 0.0 2.934860475151129 0.0 26 8.378612753086472E-5 0.0 0.0 3.0146248685605124 0.0 27 8.378612753086472E-5 0.0 0.0 3.0875187995123645 0.0 28 8.378612753086472E-5 0.0 0.0 3.173483366359032 0.0 29 8.378612753086472E-5 0.0 0.0 3.261626372521502 0.0 30 8.378612753086472E-5 0.0 0.0 3.3763295811112553 0.0 31 8.378612753086472E-5 0.0 0.0 3.495473454460145 0.0 32 8.378612753086472E-5 0.0 0.0 3.5901517785700223 0.0 33 8.378612753086472E-5 0.0 0.0 3.687595044888418 0.0 34 8.378612753086472E-5 0.0 0.0 3.793500710087431 0.0 35 8.378612753086472E-5 0.0 0.0 3.9495104795499008 0.0 36 8.378612753086472E-5 0.0 0.0 4.0612811736760746 0.0 37 8.378612753086472E-5 0.0 0.0 4.178833110601878 0.0 38 8.378612753086472E-5 0.0 0.0 4.290603804728051 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGG 20 7.856603E-4 44.000004 2 ACCGGAC 40 8.312782E-9 44.000004 39 CATATTG 20 7.856603E-4 44.000004 1 GTCGACC 20 7.856603E-4 44.000004 19 ATAGGCG 20 7.856603E-4 44.000004 2 TGCCAAC 20 7.856603E-4 44.000004 28 TTGTCGA 20 7.856603E-4 44.000004 11 TTCACGA 20 7.856603E-4 44.000004 41 CCTACGG 40 8.312782E-9 44.000004 38 GTTAGCG 55 1.8189894E-12 44.000004 1 GCGCATT 20 7.856603E-4 44.000004 9 TATGCGC 20 7.856603E-4 44.000004 1 ACGGGCC 80 0.0 44.000004 5 CTGCGAT 20 7.856603E-4 44.000004 28 TGCATCA 40 8.312782E-9 44.000004 24 AATGCGC 20 7.856603E-4 44.000004 33 ATATCCG 20 7.856603E-4 44.000004 1 ACGCTAG 20 7.856603E-4 44.000004 1 CCCTTCG 20 7.856603E-4 44.000004 39 ACCACGT 20 7.856603E-4 44.000004 41 >>END_MODULE