##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545803_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1924338 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.761678042007173 31.0 31.0 33.0 30.0 34.0 2 32.183294722652676 33.0 31.0 34.0 30.0 34.0 3 32.207901626429454 34.0 31.0 34.0 30.0 34.0 4 35.900113701439146 37.0 35.0 37.0 35.0 37.0 5 35.89170561512582 37.0 35.0 37.0 35.0 37.0 6 35.946730252169836 37.0 35.0 37.0 35.0 37.0 7 36.145808064903356 37.0 35.0 37.0 35.0 37.0 8 36.10626199763243 37.0 35.0 37.0 35.0 37.0 9 37.915061699140175 39.0 39.0 39.0 35.0 39.0 10 37.64360367045706 39.0 37.0 39.0 35.0 39.0 11 37.35382037874843 39.0 37.0 39.0 35.0 39.0 12 36.42396709933494 38.0 35.0 39.0 33.0 39.0 13 36.11499435130419 38.0 35.0 39.0 33.0 39.0 14 37.07183925069297 39.0 35.0 41.0 33.0 41.0 15 37.27942128669704 39.0 35.0 41.0 33.0 41.0 16 37.39930407236151 39.0 35.0 41.0 33.0 41.0 17 37.34077693211899 38.0 35.0 41.0 33.0 41.0 18 37.280194539628695 38.0 35.0 41.0 33.0 41.0 19 37.187527866726114 38.0 35.0 41.0 33.0 41.0 20 37.021128304902774 38.0 35.0 41.0 33.0 41.0 21 36.89767234238476 38.0 35.0 41.0 33.0 41.0 22 36.891624028626985 38.0 35.0 41.0 33.0 41.0 23 36.8802564830087 38.0 35.0 41.0 33.0 41.0 24 36.84493264696742 38.0 35.0 41.0 33.0 41.0 25 36.76394011862781 38.0 35.0 41.0 33.0 41.0 26 36.66281962939983 37.0 35.0 41.0 33.0 41.0 27 36.55180586778414 37.0 35.0 41.0 32.0 41.0 28 36.57781741045492 37.0 35.0 41.0 32.0 41.0 29 36.559260899072825 37.0 35.0 41.0 32.0 41.0 30 36.47994531106282 37.0 35.0 40.0 32.0 41.0 31 36.29751426204752 37.0 35.0 40.0 32.0 41.0 32 36.084852037427936 37.0 35.0 40.0 31.0 41.0 33 35.909270097041166 37.0 35.0 40.0 31.0 41.0 34 35.732020050531666 37.0 35.0 40.0 30.0 41.0 35 35.511053151785184 37.0 35.0 40.0 30.0 41.0 36 35.32809257001629 37.0 35.0 40.0 29.0 41.0 37 35.23719065985289 37.0 35.0 40.0 28.0 41.0 38 35.20201128907708 36.0 35.0 40.0 29.0 41.0 39 35.18479653782236 36.0 35.0 40.0 28.0 41.0 40 34.993141017846135 36.0 34.0 40.0 27.0 41.0 41 34.94558336425306 36.0 34.0 40.0 27.0 41.0 42 34.911284815869145 36.0 34.0 40.0 27.0 41.0 43 34.84544866858109 36.0 34.0 40.0 27.0 41.0 44 34.73433928966741 36.0 34.0 40.0 26.0 41.0 45 34.6165242280722 35.0 34.0 40.0 26.0 41.0 46 34.59580957191512 35.0 34.0 40.0 26.0 41.0 47 34.546076105133295 35.0 34.0 40.0 26.0 41.0 48 34.50712972461179 35.0 34.0 40.0 26.0 41.0 49 34.45648997213587 36.0 34.0 40.0 25.0 41.0 50 34.28191565099271 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 5.0 13 6.0 14 17.0 15 19.0 16 79.0 17 190.0 18 547.0 19 1100.0 20 2011.0 21 3326.0 22 5368.0 23 8215.0 24 12214.0 25 18666.0 26 26817.0 27 32920.0 28 34406.0 29 34900.0 30 39095.0 31 46679.0 32 58912.0 33 80809.0 34 169085.0 35 376944.0 36 100947.0 37 129352.0 38 226800.0 39 514905.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.912221241798477 23.443750526154968 29.544965593362498 15.099062638684057 2 31.35535441279027 25.344819880914894 30.513610394847472 12.786215311447366 3 28.201074863147742 25.23995264865112 33.08005142547723 13.47892106272391 4 25.518957688306315 27.602999057338163 32.4227344676455 14.455308786710027 5 22.375279186920384 31.583900541380984 31.90385472822342 14.13696554347521 6 20.73040183169485 39.68689492178609 28.95541219889645 10.627291047622611 7 86.04132953774233 4.426041578974172 7.770776235775628 1.7618526475078702 8 87.63294182207075 3.477871351082814 7.517858089379309 1.3713287374671186 9 83.66290121589867 4.847329315328181 9.096322995232645 2.393446473540511 10 52.112726558432044 24.59313280723033 13.933778785223803 9.360361849113826 11 46.4869996850865 18.636850698785764 22.30424177041663 12.571907845711097 12 42.20433208719051 20.244208657730606 25.56219333609792 11.98926591898097 13 20.59903197878959 42.506513928426294 23.98960057952397 12.904853513260145 14 13.62660821539667 43.4581139072242 28.811882320049804 14.103395557329327 15 12.400732095920779 22.2124179847823 52.25064411761343 13.136205801683488 16 15.018619390148716 17.67267496666386 48.55929675555957 18.74940888762785 17 15.164539701445381 17.858245277077103 29.715673649847375 37.261541371630145 18 20.041177797247677 22.636200085431977 37.01335212421103 20.309269993109318 19 27.150168005828494 23.72233983842755 28.118397079930862 21.009095075813082 20 29.35534194096879 21.764315832249846 28.152954418610456 20.727387808170914 21 20.11496940766123 27.622174482861116 30.913903898379598 21.348952211098048 22 22.492306445125546 23.1801273996564 27.53949669964424 26.788069455573815 23 16.428091114970446 30.78871799029069 26.806101630794586 25.977089263944276 24 17.539694170150984 23.36169633401201 42.59033496194535 16.508274533891658 25 15.72332926959817 25.73472019988173 38.13430904550032 20.407641485019784 26 16.952375310366474 33.13435581483087 29.322083750359862 20.591185124442795 27 16.535972370758152 34.56570519316253 29.826880724695975 19.071441711383343 28 13.143532996802017 28.006722311776826 40.75947156892396 18.09027312249719 29 14.540792729759533 23.21317772657402 40.40184208803235 21.844187455634092 30 17.242553023429355 31.06034386890453 33.62179617094294 18.075306936723173 31 27.661200890903782 27.43961819597181 27.11368792800433 17.785492985120076 32 28.20990907002824 25.583395432611113 28.469946547851784 17.736748949508872 33 26.816286951668573 27.83939204027567 26.681903075239383 18.66241793281638 34 18.98242408558164 26.48838197863369 31.06642388187522 23.46277005390945 35 19.47620428427854 26.221952692302498 32.62774003319583 21.674102990223133 36 29.83483151088842 24.81637841169275 27.582836279281498 17.765953798137332 37 20.008854993249628 31.468796022320404 31.103995244078742 17.41835374035123 38 20.3911682874838 31.643089727480305 26.704664149437363 21.261077835598527 39 19.82785768404511 31.761987758907217 28.515676559939052 19.894477997108616 40 23.369231392821842 25.868636383005477 27.068789370682282 23.693342853490396 41 16.978410237702523 24.986826638563496 28.38331935450009 29.651443769233886 42 21.134436881670478 25.884901716850155 25.887707876682786 27.09295352479658 43 22.26136988408481 27.298738579189312 27.688794795924625 22.751096740801252 44 19.378404417519167 30.949344657747236 28.61477557476909 21.05747534996451 45 15.884943289588419 39.01954854084885 23.128005579061476 21.967502590501255 46 21.073272990503746 33.551330379590276 27.482645980072107 17.892750649833864 47 21.36859532992645 28.3306778746769 27.777032932883934 22.52369386251272 48 22.523278135130106 25.123133254137265 31.456220268996404 20.89736834173622 49 20.44251061923633 24.619479530103337 33.74781353379708 21.190196316863254 50 18.808598073727172 34.15429098214555 27.873689549341123 19.163421394786155 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1566.0 1 2800.0 2 4034.0 3 12506.0 4 20978.0 5 15594.5 6 10211.0 7 10506.0 8 10801.0 9 11168.0 10 11535.0 11 11296.0 12 11057.0 13 10355.0 14 9653.0 15 9026.0 16 8399.0 17 7741.5 18 7084.0 19 7134.0 20 7184.0 21 7142.5 22 7101.0 23 7696.0 24 8291.0 25 10626.5 26 12962.0 27 14814.5 28 16667.0 29 18728.0 30 20789.0 31 30539.0 32 40289.0 33 44166.0 34 48043.0 35 55366.0 36 62689.0 37 67338.5 38 71988.0 39 88542.0 40 105096.0 41 133104.0 42 161112.0 43 186582.5 44 212053.0 45 218870.5 46 225688.0 47 198428.5 48 171169.0 49 164323.5 50 157478.0 51 147774.5 52 138071.0 53 124253.5 54 110436.0 55 95735.0 56 81034.0 57 67374.0 58 53714.0 59 46196.5 60 38679.0 61 34919.0 62 31159.0 63 25235.0 64 19311.0 65 15013.0 66 10715.0 67 8694.5 68 6674.0 69 5554.0 70 4434.0 71 3515.0 72 2596.0 73 1907.5 74 1219.0 75 1154.5 76 1090.0 77 877.0 78 664.0 79 459.0 80 254.0 81 222.5 82 191.0 83 133.0 84 75.0 85 68.5 86 62.0 87 38.0 88 14.0 89 15.5 90 17.0 91 12.5 92 8.0 93 5.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1924338.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.871015280532118 #Duplication Level Percentage of deduplicated Percentage of total 1 80.01090667705607 11.8984341580373 2 7.704984230146014 2.2916187644552077 3 2.6121169521230287 1.1653449332867563 4 1.2587720203483062 0.7487687179722379 5 0.8006392247186036 0.5953159072491873 6 0.535702526019466 0.47798642701530797 7 0.4151037651138746 0.4321110103810391 8 0.32138003594240655 0.38233979402859913 9 0.28055049053874737 0.3754863568586244 >10 3.2011818127959786 11.160059602800137 >50 0.9809100696107673 10.48902266899725 >100 1.8593844163974809 57.028055438482575 >500 0.016954873097849356 1.6139867024937915 >1k 7.064530457437232E-4 0.15621937294853008 >5k 0.0 0.0 >10k+ 7.064530457437232E-4 1.1852501449934878 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11346 0.5896053603888715 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 11218 0.5829537222670861 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02276107419798393 0.0 2 0.0 0.0 0.0 0.08912155764735717 0.0 3 0.0 0.0 0.0 0.125809499162829 0.0 4 0.0 0.0 0.0 0.18245235504365656 0.0 5 0.0 0.0 0.0 0.318187345466337 0.0 6 0.0 0.0 0.0 0.43422725113779387 0.0 7 0.0 0.0 0.0 0.5250636842384238 0.0 8 0.0 0.0 0.0 0.7509075848421639 0.0 9 0.0 0.0 0.0 0.8740668219408441 0.0 10 0.0 0.0 0.0 1.121372648671907 0.0 11 0.0 0.0 0.0 1.3301717265885722 0.0 12 0.0 0.0 0.0 1.52972087024213 0.0 13 0.0 0.0 0.0 1.5987835816784786 0.0 14 0.0 0.0 0.0 1.629287578377603 0.0 15 0.0 0.0 0.0 1.6695092026452734 0.0 16 0.0 0.0 0.0 1.7616447838165645 0.0 17 0.0 0.0 0.0 1.8766973369543187 0.0 18 0.0 0.0 0.0 2.0539530997153306 0.0 19 0.0 0.0 0.0 2.128680096739762 0.0 20 0.0 0.0 0.0 2.2108901866512016 0.0 21 0.0 0.0 0.0 2.3123796339312532 0.0 22 0.0 0.0 0.0 2.4148564337450074 0.0 23 0.0 0.0 0.0 2.5390549893002166 0.0 24 0.0 0.0 0.0 2.6337369006900033 0.0 25 0.0 0.0 0.0 2.7046184194252776 0.0 26 0.0 0.0 0.0 2.7817358488997255 0.0 27 0.0 0.0 0.0 2.8599965286763553 0.0 28 0.0 0.0 0.0 2.9427782437388856 0.0 29 0.0 0.0 0.0 3.029717232627532 0.0 30 0.0 0.0 0.0 3.14399029692289 0.0 31 0.0 0.0 0.0 3.250884200176892 0.0 32 0.0 0.0 0.0 3.3404214852068606 0.0 33 0.0 0.0 0.0 3.4368182720499205 0.0 34 0.0 0.0 0.0 3.5389313104038895 0.0 35 0.0 0.0 0.0 3.6745104030580906 0.0 36 0.0 0.0 0.0 3.77574002072401 0.0 37 0.0 0.0 0.0 3.8796718663769045 0.0 38 0.0 0.0 0.0 3.9890601339265763 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 40 8.3182385E-9 44.000004 18 TTCACGG 20 7.8578055E-4 44.000004 2 TCGGGTA 20 7.8578055E-4 44.000004 5 CGACCGT 20 7.8578055E-4 44.000004 8 ACTTACG 20 7.8578055E-4 44.000004 40 AACGCGC 20 7.8578055E-4 44.000004 40 TGTTACG 40 8.3182385E-9 44.000004 1 GTCCGGA 20 7.8578055E-4 44.000004 42 CGTACGT 20 7.8578055E-4 44.000004 17 TGCTCGA 20 7.8578055E-4 44.000004 31 GTATACG 20 7.8578055E-4 44.000004 1 ATCGGTC 20 7.8578055E-4 44.000004 26 TCGGTAT 20 7.8578055E-4 44.000004 34 CTAGCGT 40 8.3182385E-9 44.000004 41 CGAACGG 25 4.4439625E-5 44.0 2 GCGAATC 25 4.4439625E-5 44.0 11 CGATTCA 35 1.4467696E-7 44.0 10 CATTACC 70 0.0 44.0 10 TCGGATC 50 2.7284841E-11 44.0 39 CTAACCG 45 4.802132E-10 44.0 1 >>END_MODULE