##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545801_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4268405 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.653506169166235 31.0 31.0 33.0 30.0 34.0 2 32.0729829995045 33.0 31.0 34.0 30.0 34.0 3 32.13593977141344 33.0 31.0 34.0 30.0 34.0 4 35.843553505349185 37.0 35.0 37.0 35.0 37.0 5 35.83677954645822 37.0 35.0 37.0 35.0 37.0 6 35.893532830178955 37.0 35.0 37.0 35.0 37.0 7 36.070871906484975 37.0 35.0 37.0 35.0 37.0 8 36.00741049642665 37.0 35.0 37.0 35.0 37.0 9 37.73663651879332 39.0 38.0 39.0 35.0 39.0 10 37.44807908340469 39.0 37.0 39.0 35.0 39.0 11 37.28393439704058 39.0 37.0 39.0 34.0 39.0 12 36.762632880431916 39.0 35.0 39.0 33.0 39.0 13 36.58056088866919 39.0 35.0 39.0 33.0 39.0 14 37.65320160575203 40.0 35.0 41.0 33.0 41.0 15 37.78759232078493 40.0 35.0 41.0 33.0 41.0 16 37.83442152279364 40.0 35.0 41.0 33.0 41.0 17 37.76220485169519 40.0 35.0 41.0 33.0 41.0 18 37.67837142914039 39.0 36.0 41.0 33.0 41.0 19 37.59644621351535 39.0 36.0 41.0 33.0 41.0 20 37.43103524618681 39.0 35.0 41.0 33.0 41.0 21 37.32816801592164 39.0 35.0 41.0 33.0 41.0 22 37.32590581259276 39.0 35.0 41.0 33.0 41.0 23 37.30145382174372 39.0 35.0 41.0 33.0 41.0 24 37.274003286942076 39.0 35.0 41.0 33.0 41.0 25 37.17285051441932 39.0 35.0 41.0 33.0 41.0 26 37.08244625334287 39.0 35.0 41.0 33.0 41.0 27 36.977901347224545 39.0 35.0 41.0 32.0 41.0 28 36.9108990360568 39.0 35.0 41.0 32.0 41.0 29 36.833706501608916 39.0 35.0 41.0 32.0 41.0 30 36.70750807385897 38.0 35.0 41.0 31.0 41.0 31 36.5679126043569 38.0 35.0 41.0 31.0 41.0 32 36.38430959573893 38.0 35.0 41.0 31.0 41.0 33 36.22075623095746 38.0 35.0 41.0 30.0 41.0 34 36.02009298555315 38.0 35.0 41.0 30.0 41.0 35 35.80179270711191 38.0 35.0 41.0 29.0 41.0 36 35.64864908554835 38.0 35.0 41.0 27.0 41.0 37 35.58303136651747 38.0 35.0 41.0 27.0 41.0 38 35.479254897321134 38.0 35.0 41.0 27.0 41.0 39 35.41754238409898 38.0 35.0 41.0 27.0 41.0 40 35.282023378756236 38.0 35.0 40.0 26.0 41.0 41 35.171297709565984 38.0 34.0 40.0 25.0 41.0 42 35.15145048326014 38.0 34.0 40.0 25.0 41.0 43 35.085151713579194 38.0 34.0 40.0 25.0 41.0 44 34.948706601177726 38.0 34.0 40.0 24.0 41.0 45 34.82525088411245 38.0 34.0 40.0 24.0 41.0 46 34.78763683389931 37.0 34.0 40.0 24.0 41.0 47 34.71094003497794 37.0 34.0 40.0 24.0 41.0 48 34.635891392686496 37.0 34.0 40.0 23.0 41.0 49 34.563717594745576 37.0 34.0 40.0 24.0 41.0 50 34.41143331056917 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 10.0 12 18.0 13 28.0 14 84.0 15 151.0 16 301.0 17 674.0 18 1478.0 19 2998.0 20 5525.0 21 9028.0 22 13970.0 23 20235.0 24 29394.0 25 43110.0 26 61656.0 27 75602.0 28 79239.0 29 81936.0 30 89848.0 31 103149.0 32 127223.0 33 165481.0 34 303476.0 35 550982.0 36 254968.0 37 344058.0 38 593580.0 39 1310195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.07647470190856 22.02197307893698 27.901897781489808 14.999654437664656 2 33.52955026526302 24.809173450035786 28.460045379948717 13.201230904752478 3 30.063595183681024 23.737578791140955 32.2375688342601 13.96125719091792 4 26.67795113162879 26.558538845306384 31.83931702825763 14.924192994807195 5 22.69205944609286 32.15885090566617 30.911546584731298 14.237543063509673 6 21.041466308843702 40.41476851423424 28.281102660127143 10.262662516794915 7 84.99685479704948 4.377466524380887 8.580043365144592 2.0456353134250382 8 85.34581418586099 3.7410695564268153 8.712973581466613 2.2001426762455765 9 80.09774142800413 5.833724775413767 10.670355788637677 3.39817800794442 10 42.15591069732136 24.56641298096127 21.055687077491474 12.221989244225888 11 37.25602420576305 23.226685377793345 24.57316023198361 14.944130184460002 12 34.296347230405736 22.306130744388124 28.20732803002527 15.19019399518087 13 22.88536350229184 33.04140539616086 27.370575191435677 16.702655910111623 14 17.84950116026947 35.52130128232911 30.592481266421533 16.036716290979886 15 18.149730402808544 23.92734522614419 41.58818106529254 16.334743305754724 16 18.99997774344281 21.32164122195527 40.64208996100417 19.03629107359775 17 18.70422324029702 21.993016126632785 30.801411768564602 28.501348864505594 18 21.55488994132469 24.243177486672423 34.582215136567406 19.619717435435486 19 26.846468411502656 24.65897683092396 28.886363875967717 19.60819088160566 20 27.324070700882412 23.711105202060253 28.881444005430602 20.083380091626733 21 22.300859454526925 27.492423985071706 30.79208744249901 19.414629117902354 22 22.47921647547503 24.114230022689974 29.253386218036947 24.153167283798048 23 20.01820352098735 27.933830084071214 29.301226102021715 22.74674029291972 24 19.562928072664146 25.24202834548268 36.68627976960949 18.508763812243682 25 18.817309978785985 25.870600376487236 34.61412401119387 20.6979656335329 26 18.61322906331522 30.23557980088581 30.15894696028142 20.992244175517552 27 19.069886760979806 30.499847132594027 30.66567019764994 19.76459590877623 28 17.225146161153873 28.076693753287234 35.290676493912834 19.40748359164606 29 18.223013045856707 25.453043935615295 35.08369051202967 21.24025250649833 30 20.02237369696643 28.611108833393267 32.34589969789652 19.02061777174378 31 26.08620784578783 26.534337767854737 27.998186676287744 19.381267710069686 32 25.69646038742809 26.254092570878353 29.311651541969425 18.737795499724136 33 24.749783584266254 27.29588687109119 28.188749661758898 19.765579882883653 34 20.459094204978207 27.147189641095444 30.304645412045016 22.089070741881333 35 21.74756144274032 25.684933833598265 30.745536096035874 21.82196862762554 36 25.841338860768836 27.466582950774352 27.782180931753196 18.909897256703616 37 20.88543612895215 31.487546284853472 28.736424964360225 18.890592621834152 38 21.278088653724282 31.026156140291278 26.709555442841058 20.986199763143375 39 21.348723937864378 29.634020201925544 28.146017071950762 20.871238788259312 40 23.083962276306956 26.410708449643366 28.033469176425385 22.471860097624287 41 18.94215755065417 26.81926855581886 28.391096908564208 25.847476984962768 42 21.45733593696006 27.492939400080356 26.512034354753123 24.53769030820646 43 22.58803932616516 26.924342933718805 27.308116263569175 23.17950147654686 44 20.745290102509017 28.810152738552226 28.85918744823886 21.585369710699897 45 19.054471166630158 32.97201179363252 26.39868990875983 21.574827130977496 46 20.938711298482687 31.140507988346933 28.32331983492663 19.597460878243748 47 21.83398716850908 27.592953339713546 29.241836236252183 21.331223255525188 48 21.716636542221273 26.11043235119442 31.090442448642996 21.082488657941315 49 20.87449527399579 26.764704848766698 31.70277890687505 20.658020970362465 50 20.379907717285498 30.57783879458486 28.561066721644266 20.481186766485372 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2699.0 1 6431.5 2 10164.0 3 34861.5 4 59559.0 5 43058.0 6 26557.0 7 25473.0 8 24389.0 9 24428.5 10 24468.0 11 23833.5 12 23199.0 13 21895.5 14 20592.0 15 19674.0 16 18756.0 17 18534.0 18 18312.0 19 17958.5 20 17605.0 21 18074.5 22 18544.0 23 21101.5 24 23659.0 25 29903.0 26 36147.0 27 41641.5 28 47136.0 29 59664.5 30 72193.0 31 82001.0 32 91809.0 33 103023.5 34 114238.0 35 129024.0 36 143810.0 37 151131.5 38 158453.0 39 179046.0 40 199639.0 41 243233.0 42 286827.0 43 322696.0 44 358565.0 45 370226.0 46 381887.0 47 371295.5 48 360704.0 49 358526.0 50 356348.0 51 335481.5 52 314615.0 53 287830.5 54 261046.0 55 240757.0 56 220468.0 57 196632.0 58 172796.0 59 153909.0 60 135022.0 61 114905.5 62 94789.0 63 78478.0 64 62167.0 65 50670.5 66 39174.0 67 31967.5 68 24761.0 69 21226.5 70 17692.0 71 14924.5 72 12157.0 73 9734.0 74 7311.0 75 6096.5 76 4882.0 77 3776.0 78 2670.0 79 1963.5 80 1257.0 81 959.5 82 662.0 83 509.5 84 357.0 85 254.5 86 152.0 87 117.0 88 82.0 89 62.5 90 43.0 91 29.5 92 16.0 93 17.5 94 19.0 95 13.5 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4268405.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.598789186478033 #Duplication Level Percentage of deduplicated Percentage of total 1 80.40445353695283 11.738076668399426 2 7.432103875411561 2.169994353782796 3 2.5864224461003267 1.1327590811338053 4 1.3157406972143453 0.7683288425080741 5 0.7768497682135349 0.5670532997856861 6 0.5541365619312971 0.4853833708892841 7 0.4086042128287124 0.4175588734655223 8 0.32017671552773525 0.3739353897926684 9 0.2835898517665291 0.37260616152277026 >10 3.1183280715771495 10.787943858462008 >50 1.0175863525729552 10.710326402059959 >100 1.7469708620890096 55.746409522483106 >500 0.031288898512966914 2.7662551233451165 >1k 0.003422223274855756 1.0413633133439042 >5k 1.6296301308836936E-4 0.21737495645671323 >10k+ 1.6296301308836936E-4 0.7046307825692166 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29618 0.6938891693735716 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 9137 0.21406122427464125 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 4912 0.11507811465875427 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 4910 0.11503125874887692 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 4723 0.11065023117534536 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 4623 0.10830743568147821 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018906359635507877 0.0 2 0.0 0.0 0.0 0.06721480271904845 0.0 3 0.0 0.0 0.0 0.09572662387941162 0.0 4 0.0 0.0 0.0 0.1457687356284139 0.0 5 0.0 0.0 0.0 0.2711317225052449 0.0 6 2.342795493867147E-5 0.0 0.0 0.4036870915482481 0.0 7 2.342795493867147E-5 0.0 0.0 0.5095580199161045 0.0 8 2.342795493867147E-5 0.0 0.0 0.8071867594569868 0.0 9 2.342795493867147E-5 0.0 0.0 0.9420849239938572 0.0 10 2.342795493867147E-5 0.0 0.0 1.180839212773858 0.0 11 2.342795493867147E-5 0.0 0.0 1.3210086671719297 0.0 12 2.342795493867147E-5 0.0 0.0 1.4703384519510214 0.0 13 4.685590987734294E-5 0.0 0.0 1.5257455653809795 0.0 14 4.685590987734294E-5 0.0 0.0 1.5451204841152608 0.0 15 4.685590987734294E-5 0.0 0.0 1.573070034357096 0.0 16 4.685590987734294E-5 0.0 0.0 1.6398162779773708 0.0 17 4.685590987734294E-5 0.0 0.0 1.718042219517595 0.0 18 4.685590987734294E-5 0.0 0.0 1.8374076499301262 0.0 19 7.028386481601442E-5 0.0 0.0 1.8865126434815815 0.0 20 7.028386481601442E-5 0.0 0.0 1.939108402318899 0.0 21 7.028386481601442E-5 0.0 0.0 2.0114539271695167 0.0 22 7.028386481601442E-5 0.0 0.0 2.090148427808514 0.0 23 7.028386481601442E-5 0.0 0.0 2.1787529533865695 0.0 24 7.028386481601442E-5 0.0 0.0 2.2468580183932874 0.0 25 7.028386481601442E-5 0.0 0.0 2.3069741507659183 0.0 26 7.028386481601442E-5 0.0 0.0 2.367558842237323 0.0 27 7.028386481601442E-5 0.0 0.0 2.4259881618543693 0.0 28 7.028386481601442E-5 0.0 0.0 2.4922892743308096 0.0 29 7.028386481601442E-5 0.0 0.0 2.564142812127715 0.0 30 7.028386481601442E-5 0.0 0.0 2.6539421634076428 0.0 31 7.028386481601442E-5 0.0 0.0 2.7417735664727223 0.0 32 7.028386481601442E-5 0.0 0.0 2.8215691809938375 0.0 33 7.028386481601442E-5 0.0 0.0 2.899677982759368 0.0 34 7.028386481601442E-5 0.0 0.0 2.9850025946460095 0.0 35 7.028386481601442E-5 0.0 0.0 3.088718151159508 0.0 36 7.028386481601442E-5 0.0 0.0 3.1812585731672605 0.0 37 7.028386481601442E-5 0.0 0.0 3.2740098467694607 0.0 38 9.371181975468588E-5 0.0 0.0 3.367955946073533 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATCG 20 7.8588846E-4 44.000004 1 TACCGAT 20 7.8588846E-4 44.000004 10 GTCGAAC 35 1.4473153E-7 44.0 9 ATTTACG 160 0.0 42.625004 1 CGACGGT 490 0.0 41.7551 28 CGTTTTT 19015 0.0 41.246384 1 TTACGCT 65 0.0 40.615383 35 TTACGCG 120 0.0 40.333332 1 TCACGAC 515 0.0 40.15534 25 CACGACG 525 0.0 39.39048 26 TACGAAC 40 4.128051E-7 38.500004 41 ACGATTG 145 0.0 37.931038 1 TAACGCG 140 0.0 37.714287 1 TTAGCGG 935 0.0 37.64706 2 TACGGGA 1275 0.0 37.44314 4 TAGGGTC 1865 0.0 37.158176 5 AGGGCGC 925 0.0 37.102703 6 TTTAGCG 255 0.0 37.09804 1 CGACAAT 305 0.0 36.786884 20 TACGCTA 90 0.0 36.666668 37 >>END_MODULE