##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545798_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2759230 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.74194467297036 31.0 31.0 33.0 30.0 34.0 2 32.162032161146406 33.0 31.0 34.0 30.0 34.0 3 32.198506467384014 34.0 31.0 34.0 30.0 34.0 4 35.8717247203024 37.0 35.0 37.0 35.0 37.0 5 35.848620086038494 37.0 35.0 37.0 35.0 37.0 6 35.89972419841767 37.0 35.0 37.0 35.0 37.0 7 36.13142470906738 37.0 35.0 37.0 35.0 37.0 8 36.09554187218898 37.0 35.0 37.0 35.0 37.0 9 37.91441162933137 39.0 39.0 39.0 35.0 39.0 10 37.66492499719124 39.0 37.0 39.0 35.0 39.0 11 37.289296289182126 39.0 37.0 39.0 35.0 39.0 12 35.8770504814749 35.0 35.0 39.0 33.0 39.0 13 35.38731421447288 35.0 35.0 39.0 32.0 39.0 14 36.16631705222109 36.0 35.0 41.0 32.0 41.0 15 36.49638558583373 36.0 35.0 41.0 33.0 41.0 16 36.70000688597906 36.0 35.0 41.0 33.0 41.0 17 36.66487860743758 36.0 35.0 41.0 33.0 41.0 18 36.64743968425974 36.0 35.0 40.0 33.0 41.0 19 36.567686999633956 36.0 35.0 40.0 33.0 41.0 20 36.35921905749068 36.0 35.0 40.0 33.0 41.0 21 36.17929386096846 35.0 35.0 40.0 32.0 41.0 22 36.14251657165224 35.0 35.0 40.0 32.0 41.0 23 36.20460961935033 35.0 35.0 40.0 32.0 41.0 24 36.16689076300272 35.0 35.0 40.0 32.0 41.0 25 36.07751039239208 35.0 35.0 40.0 32.0 41.0 26 35.94315769254466 35.0 35.0 40.0 32.0 41.0 27 35.85081526367863 35.0 35.0 40.0 32.0 41.0 28 35.893583717196464 36.0 35.0 40.0 32.0 41.0 29 35.92077717334184 36.0 35.0 40.0 32.0 41.0 30 35.862688866096704 36.0 35.0 40.0 32.0 41.0 31 35.615171623967555 35.0 35.0 40.0 31.0 41.0 32 35.359818862508746 35.0 35.0 40.0 31.0 41.0 33 35.19738042859783 35.0 35.0 40.0 30.0 41.0 34 35.046350974728455 35.0 35.0 40.0 30.0 41.0 35 34.82950243364997 35.0 34.0 40.0 29.0 41.0 36 34.62379286974989 35.0 34.0 40.0 27.0 41.0 37 34.523795406689544 35.0 34.0 40.0 27.0 41.0 38 34.475149226414615 35.0 34.0 40.0 27.0 41.0 39 34.49558898678254 35.0 34.0 40.0 27.0 41.0 40 34.26080754413369 35.0 34.0 40.0 25.0 41.0 41 34.20671382958289 35.0 34.0 40.0 25.0 41.0 42 34.191400136994744 35.0 34.0 40.0 25.0 41.0 43 34.056778521544054 35.0 34.0 40.0 25.0 41.0 44 33.93218397886367 35.0 34.0 39.0 24.0 41.0 45 33.80948453010441 35.0 34.0 39.0 23.0 41.0 46 33.81082077246188 35.0 34.0 39.0 24.0 41.0 47 33.75521178009807 35.0 33.0 39.0 23.0 41.0 48 33.744874475850146 35.0 34.0 39.0 23.0 41.0 49 33.75643059839158 35.0 34.0 39.0 24.0 41.0 50 33.48954273474846 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 6.0 13 3.0 14 6.0 15 33.0 16 98.0 17 341.0 18 817.0 19 1773.0 20 3169.0 21 5468.0 22 8740.0 23 13287.0 24 19905.0 25 30256.0 26 42060.0 27 50946.0 28 54400.0 29 56629.0 30 63715.0 31 77195.0 32 97453.0 33 134387.0 34 296506.0 35 726398.0 36 128734.0 37 147183.0 38 243356.0 39 556360.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.503462922626962 22.983296064481756 30.095243962989677 15.417997049901603 2 29.73119312271902 25.29053395331306 31.118138031262344 13.860134892705572 3 26.395697350347742 25.231314533402433 33.997999441873276 14.374988674376546 4 24.944712836552227 27.359843144645424 32.793243042442995 14.902200976359348 5 21.557354769265338 32.81154524994292 31.56279106852274 14.068308912269003 6 20.543412473769855 38.94561163802945 28.96597963924718 11.544996248953513 7 85.81361466786024 4.8832101709534905 7.308234543695161 1.9949406174911117 8 88.4685220151999 3.1835330871293803 6.656639714703015 1.6913051829677122 9 85.24823954509047 4.187617559971441 8.330186320096548 2.2339565748415318 10 64.1620307114666 16.749817883974877 11.433515872181733 7.654635532376785 11 59.05821551664776 14.779195645161874 17.158482620151275 9.004106218039091 12 52.05484863530767 19.5721632484425 19.396896960383874 8.976091155865948 13 19.325282778166372 51.827683810338385 19.544909268165394 9.302124143329841 14 11.194971060766953 52.2165241752228 26.99687956422625 9.591625199783998 15 8.343378406294509 20.511664486106632 61.29075865368237 9.85419845391649 16 10.023992200722667 13.526309876306069 58.09541067616691 18.35428724680436 17 10.896373263555411 13.788049564552429 30.02203513299 45.29354203890216 18 20.618324677536847 19.448614287319288 38.8713880321684 21.061673002975468 19 30.608974242814117 22.522406613439255 26.091373317918404 20.77724582582822 20 33.94892778057647 20.53268484323525 24.784813154394524 20.73357422179376 21 19.188614214835297 29.111563733360395 28.487005432675055 23.21281661912925 22 19.723328609793313 24.47204473711869 25.694632198113244 30.10999445497476 23 14.839719776894277 32.69615073770581 24.8935753815376 27.57055410386231 24 16.941501795790856 21.240853426499424 46.948242806870034 14.869401970839691 25 11.995049343476259 24.123976616664795 42.74177940947293 21.13919463038601 26 12.352975286583575 38.62900156927839 28.98863088615302 20.02939225798502 27 14.611938838009156 37.84153550084625 30.289319846478907 17.257205814665685 28 10.462447856829622 28.010604407751437 45.64490818090554 15.882039554513398 29 10.115756932187603 24.29199450571355 44.23864628900092 21.35360227309793 30 14.946633662289841 32.90591940505141 34.09197493503623 18.055471997622526 31 32.74968016439369 24.909413133374166 24.459505006831616 17.881401695400527 32 33.10130000036242 26.396603400223977 25.769580643875283 14.73251595553832 33 29.820638366500802 27.06280375322101 24.40463462632691 18.711923253951284 34 16.947590450959144 27.320194402061443 29.671828734828193 26.060386412151214 35 18.233963823240543 24.518470732776898 34.44229005918318 22.80527538479938 36 33.4943081946775 22.79121349072024 26.301649373194696 17.412828941407565 37 18.62552233775365 34.376220902208225 30.25546982310282 16.742786936935307 38 17.828560866618588 36.11496685669553 23.651997115137195 22.404475161548692 39 19.40885681875016 33.149429369787946 28.85290461469323 18.588809196768665 40 24.897851936953426 25.20938812639758 24.14688155753598 25.745878379113012 41 14.015685535457356 23.84484077079475 27.09842963435451 35.041044059393386 42 22.44278295031585 24.028442717714725 23.24750020839147 30.281274123577955 43 22.675601526512832 24.897054613062338 25.884250316211403 26.54309354421342 44 17.613283416025485 32.245119109316725 29.452600906774716 20.68899656788307 45 13.494308194677501 43.304400140618945 21.61429094348786 21.587000721215702 46 21.01923362677269 35.57467119449991 24.723962844706676 18.682132334020725 47 20.546203107388656 27.84599326623732 27.557035839708906 24.05076778666512 48 23.63840636699369 21.713304073962664 33.88517811128467 20.763111447758973 49 19.85869246130261 22.21869869492576 35.34221503825343 22.580393805518206 50 17.458421371179643 36.97999079453326 26.50250250975816 19.059085324528947 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3024.0 1 4058.0 2 5092.0 3 13697.0 4 22302.0 5 17401.5 6 12501.0 7 13776.0 8 15051.0 9 15737.0 10 16423.0 11 15917.5 12 15412.0 13 14267.5 14 13123.0 15 12198.5 16 11274.0 17 10750.5 18 10227.0 19 9446.5 20 8666.0 21 9321.0 22 9976.0 23 9889.0 24 9802.0 25 10301.5 26 10801.0 27 10792.5 28 10784.0 29 19143.5 30 27503.0 31 30018.5 32 32534.0 33 41906.0 34 51278.0 35 56415.5 36 61553.0 37 65909.5 38 70266.0 39 103892.0 40 137518.0 41 210654.5 42 283791.0 43 331592.5 44 379394.0 45 391936.0 46 404478.0 47 336597.0 48 268716.0 49 258241.5 50 247767.0 51 220840.0 52 193913.0 53 171799.5 54 149686.0 55 120007.0 56 90328.0 57 80114.5 58 69901.0 59 56705.0 60 43509.0 61 36223.5 62 28938.0 63 24023.0 64 19108.0 65 14584.0 66 10060.0 67 7893.0 68 5726.0 69 4593.0 70 3460.0 71 2781.0 72 2102.0 73 1957.5 74 1813.0 75 1240.0 76 667.0 77 484.5 78 302.0 79 247.0 80 192.0 81 173.5 82 155.0 83 102.5 84 50.0 85 44.0 86 38.0 87 26.5 88 15.0 89 9.5 90 4.0 91 4.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2759230.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.917418053186585 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70644100948243 10.166840019979535 2 9.559257219599917 2.4696184356702835 3 3.55590623990846 1.3779938237649711 4 1.6870615259516262 0.8716991604865618 5 0.9750736958491744 0.6297717280974746 6 0.6474905561279445 0.5018343719396959 7 0.452641448179386 0.40928711700330456 8 0.3340391347661394 0.3451938519919165 9 0.2548614532844094 0.29629367439456594 >10 1.8761389722645436 5.063911956455837 >50 0.4530026089708574 4.2481094160487105 >100 1.112069245801935 38.4953633129914 >500 0.3712574204967504 31.531534043492048 >1k 0.01419179741960055 2.4260751455021516 >5k 0.0 0.0 >10k+ 5.67671896784022E-4 1.1664739421815167 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 19466 0.70548667563052 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12349 0.4475523968643426 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 3105 0.11253139462821149 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06570673702445973 0.0 2 0.0 0.0 0.0 0.26790082740474697 0.0 3 0.0 0.0 0.0 0.3736187269636819 0.0 4 3.624199504934347E-5 0.0 0.0 0.5315250993936714 0.0 5 3.624199504934347E-5 0.0 0.0 0.8911181742732573 0.0 6 3.624199504934347E-5 0.0 0.0 1.2309231198559019 0.0 7 3.624199504934347E-5 0.0 0.0 1.4774049281864867 0.0 8 3.624199504934347E-5 0.0 0.0 2.0302765626642216 0.0 9 3.624199504934347E-5 0.0 0.0 2.2732428974750203 0.0 10 3.624199504934347E-5 0.0 0.0 2.6719773270078973 0.0 11 3.624199504934347E-5 0.0 0.0 2.9838034524124484 0.0 12 3.624199504934347E-5 0.0 0.0 3.307371984212987 0.0 13 3.624199504934347E-5 0.0 0.0 3.4201208308114945 0.0 14 3.624199504934347E-5 0.0 0.0 3.4559641639152954 0.0 15 3.624199504934347E-5 0.0 0.0 3.525367584434788 0.0 16 3.624199504934347E-5 0.0 0.0 3.6884565621568335 0.0 17 3.624199504934347E-5 0.0 0.0 3.8926077202697855 0.0 18 7.248399009868695E-5 0.0 0.0 4.264269379500803 0.0 19 7.248399009868695E-5 0.0 0.0 4.367631549381531 0.0 20 7.248399009868695E-5 0.0 0.0 4.483678417529529 0.0 21 7.248399009868695E-5 0.0 0.0 4.63259677518728 0.0 22 7.248399009868695E-5 0.0 0.0 4.776006349597533 0.0 23 7.248399009868695E-5 0.0 0.0 4.9576149867897925 0.0 24 7.248399009868695E-5 0.0 0.0 5.077068602472429 0.0 25 7.248399009868695E-5 0.0 0.0 5.166006458323518 0.0 26 7.248399009868695E-5 0.0 0.0 5.26744780246663 0.0 27 7.248399009868695E-5 0.0 0.0 5.3616045056048245 0.0 28 7.248399009868695E-5 0.0 0.0 5.460436426104384 0.0 29 7.248399009868695E-5 0.0 0.0 5.572786610757349 0.0 30 7.248399009868695E-5 0.0 0.0 5.731200371118029 0.0 31 7.248399009868695E-5 0.0 0.0 5.877545547127278 0.0 32 7.248399009868695E-5 0.0 0.0 5.989424585844602 0.0 33 7.248399009868695E-5 0.0 0.0 6.100832478626283 0.0 34 7.248399009868695E-5 0.0 0.0 6.222351888026732 0.0 35 7.248399009868695E-5 0.0 0.0 6.40852701659521 0.0 36 7.248399009868695E-5 0.0 0.0 6.542767366257978 0.0 37 7.248399009868695E-5 0.0 0.0 6.665663971470302 0.0 38 7.248399009868695E-5 0.0 0.0 6.783994085306408 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACTC 20 7.8584003E-4 44.000004 9 AAATCGT 80 0.0 44.000004 12 GTCGACA 20 7.8584003E-4 44.000004 40 ACGTTGC 20 7.8584003E-4 44.000004 12 CGCGATC 40 8.3200575E-9 44.000004 40 CGACACT 20 7.8584003E-4 44.000004 42 TCGATAT 65 0.0 44.000004 17 CCTCGCG 20 7.8584003E-4 44.000004 16 ATCGTAA 80 0.0 44.000004 14 TCGGAGC 40 8.3200575E-9 44.000004 32 TGCGATA 20 7.8584003E-4 44.000004 29 CTACGCA 80 0.0 44.000004 28 TACGACA 20 7.8584003E-4 44.000004 4 TTAACGC 20 7.8584003E-4 44.000004 15 ACGTCCA 40 8.3200575E-9 44.000004 30 ATTGGAC 40 8.3200575E-9 44.000004 1 GTATAGT 20 7.8584003E-4 44.000004 20 CATCGGA 20 7.8584003E-4 44.000004 26 CGTAACG 20 7.8584003E-4 44.000004 1 CGTAAAT 80 0.0 44.000004 16 >>END_MODULE