##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545795_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 713068 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.952691748893514 31.0 31.0 33.0 30.0 33.0 2 31.120769688164383 31.0 31.0 33.0 30.0 34.0 3 31.086227400472325 31.0 31.0 34.0 28.0 34.0 4 35.06412151435768 35.0 35.0 37.0 32.0 37.0 5 32.74843633426265 35.0 35.0 37.0 28.0 37.0 6 33.941361833654014 35.0 35.0 37.0 28.0 37.0 7 15.460038874272861 0.0 0.0 35.0 0.0 37.0 8 24.98744579759574 17.0 17.0 35.0 17.0 37.0 9 32.72134494886883 32.0 32.0 37.0 27.0 39.0 10 35.37257456511861 37.0 34.0 37.0 32.0 39.0 11 36.345822558297385 37.0 35.0 39.0 32.0 39.0 12 36.335043782640646 37.0 35.0 39.0 32.0 39.0 13 36.17549097701762 38.0 35.0 39.0 32.0 39.0 14 37.206284674112425 39.0 36.0 40.0 32.0 41.0 15 37.48780901681186 39.0 36.0 41.0 32.0 41.0 16 37.459381152989614 39.0 36.0 41.0 32.0 41.0 17 37.393920355421926 39.0 36.0 41.0 32.0 41.0 18 37.34408078892896 39.0 36.0 40.0 32.0 41.0 19 37.29206611431168 39.0 36.0 40.0 32.0 41.0 20 37.41741320603364 39.0 36.0 41.0 32.0 41.0 21 37.299657255689496 39.0 35.0 41.0 32.0 41.0 22 37.36825800624905 39.0 35.0 41.0 32.0 41.0 23 37.33539017316721 39.0 35.0 41.0 32.0 41.0 24 37.16805550101814 39.0 35.0 40.0 32.0 41.0 25 36.91895022634588 39.0 35.0 40.0 31.0 41.0 26 36.799904076469566 39.0 35.0 40.0 31.0 41.0 27 36.73303527854286 39.0 35.0 40.0 31.0 41.0 28 36.632624097561525 38.0 35.0 40.0 31.0 41.0 29 36.57375874390661 38.0 35.0 40.0 31.0 41.0 30 36.290617444619585 38.0 35.0 40.0 30.0 41.0 31 36.18750245418389 38.0 35.0 40.0 30.0 41.0 32 36.12570189659331 38.0 35.0 40.0 30.0 41.0 33 35.9561248015617 38.0 35.0 40.0 29.0 41.0 34 35.789596504120226 38.0 35.0 40.0 28.0 41.0 35 35.62138253294216 38.0 34.0 40.0 27.0 41.0 36 35.422604856759804 38.0 34.0 40.0 26.0 41.0 37 35.30685713003528 38.0 34.0 40.0 26.0 41.0 38 35.14894371925258 38.0 34.0 40.0 25.0 41.0 39 35.02715589537043 38.0 34.0 40.0 25.0 41.0 40 34.861216602063195 38.0 34.0 40.0 24.0 41.0 41 34.69115708459782 38.0 33.0 40.0 24.0 41.0 42 34.652644628562776 38.0 33.0 40.0 24.0 41.0 43 34.58386577437215 38.0 33.0 40.0 23.0 41.0 44 34.36036955802252 37.0 33.0 40.0 23.0 41.0 45 34.27240038818177 37.0 33.0 40.0 23.0 41.0 46 34.229230592313776 37.0 33.0 40.0 23.0 41.0 47 34.13086129233117 37.0 33.0 40.0 23.0 41.0 48 34.04139857629286 37.0 33.0 40.0 23.0 41.0 49 33.909824869437415 36.0 33.0 40.0 23.0 41.0 50 33.79910892088833 36.0 33.0 40.0 23.0 41.0 51 33.624258836464406 36.0 32.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 3.0 14 6.0 15 48.0 16 88.0 17 216.0 18 466.0 19 841.0 20 1480.0 21 2375.0 22 3682.0 23 5457.0 24 7615.0 25 10059.0 26 11977.0 27 13336.0 28 14691.0 29 17211.0 30 20722.0 31 26703.0 32 34470.0 33 48995.0 34 62141.0 35 71092.0 36 90021.0 37 132432.0 38 112331.0 39 24605.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.67392731128027 24.283097825172355 27.911082813981274 14.1318920495661 2 32.9784817156288 23.56142752163889 30.687676350642572 12.77241441208973 3 31.038554527758922 23.298339008341422 32.6288656902287 13.034240773670955 4 27.212131241340238 27.476061189115203 29.604048982705716 15.707758586838844 5 21.307505034582956 36.52624995091632 28.23798010848895 13.92826490601177 6 19.90707758586839 42.481221987243856 27.630324176656362 9.981376250231394 7 39.439997307409676 56.053279631115124 3.8334352403978302 0.6732878210773727 8 89.75960216977904 2.5251448669692094 6.310197624910948 1.4050553383408035 9 85.43350704280658 4.116998659314399 7.76545855374242 2.684035744136604 10 43.311297099294876 26.127802678005462 15.618566532224134 14.942333690475524 11 37.11932101847229 24.119719297458307 21.71532027800995 17.04563940605945 12 34.02971385618202 21.280859609462212 27.085635591556485 17.603790942799286 13 24.404825346250288 29.421597940168397 27.213954349374813 18.9596223642065 14 19.37164478002098 33.39793680266118 28.92094442605754 18.3094739912603 15 18.728087643815176 24.18535118670309 38.19930217033999 18.887258999141736 16 20.95957187813785 19.642165964536343 38.25217230334274 21.14608985398307 17 20.46649127432447 20.453028322684514 29.402946142583875 29.67753426040714 18 22.783521347192696 23.65721081299399 31.902146779830254 21.65712105998306 19 27.88401667162178 25.414967436485718 25.774961153774957 20.926054738117543 20 29.141540498241405 24.24887948975413 25.101673332697583 21.50790667930688 21 25.022858969972006 26.12822339524421 28.78813801769256 20.060779617091217 22 23.918335979177304 22.81423370562134 26.91987299948953 26.34755731571183 23 22.20251084048085 27.8642429614006 26.032580342968693 23.90066585514986 24 21.784458144244308 25.86681775090174 32.63209118905911 19.716632915794847 25 23.120375616350756 24.402721760056544 30.28575114855806 22.19115147503464 26 20.620754261865628 28.62167423022769 26.727605221381413 24.029966286525266 27 20.54614707152754 28.22087094077984 29.031733298928014 22.201248688764604 28 19.30138500114996 26.901641919143753 33.275227608026164 20.52174547168012 29 20.290491229447962 25.8728480313238 32.137327716290734 21.699333022937502 30 22.142067797180633 27.089001329466473 30.453477087739177 20.315453785613713 31 28.75041370528477 24.68376087554062 25.614247168572984 20.951578250601628 32 27.919076441517497 25.03267570554281 26.182075201804032 20.866172651135656 33 26.643041056392942 24.770709104882002 25.948997851537303 22.637251987187756 34 21.609439772924883 26.35456926969097 27.777154492979633 24.258836464404517 35 22.36196267396658 24.29067073546983 29.130461610954356 24.21690497960924 36 28.242888476274352 25.69839061632271 25.247662214543354 20.81105869285959 37 22.3707977359803 29.231013031015273 26.340264883573518 22.05792434943091 38 22.872292684568652 30.192211682476284 24.083397375846342 22.852098257108718 39 22.304043934098853 27.761026998827603 25.04571793994402 24.889211127129528 40 24.04553282435897 24.507340113425368 27.296414928169543 24.15071213404612 41 21.32713850572456 23.776974986957768 27.844188773020246 27.05169773429743 42 22.39365670595231 26.408982032569124 24.694278806509338 26.503082454969228 43 22.326201708672947 25.500092557792524 26.34236846976726 25.831337263767267 44 21.902960166491837 26.37490393623049 28.304874149449983 23.4172617478277 45 21.498370421895245 29.565763713979592 25.634020878794168 23.30184498533099 46 23.179556507934727 27.78865409750543 27.347181474978544 21.684607919581303 47 22.949283939259647 27.227136822855602 26.69422832044069 23.129350917444057 48 22.312458278873823 26.869807648078442 28.149208771112992 22.66852530193474 49 22.54539539006098 25.72040815181722 29.346710271671146 22.387486186450662 50 21.907447817038488 27.664542512074586 27.969983227406082 22.458026443480847 51 21.74841670079151 28.94240100523372 26.469986032187677 22.839196261787094 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 330.0 1 678.5 2 1027.0 3 3902.5 4 6778.0 5 5012.0 6 3246.0 7 3173.0 8 3100.0 9 3191.0 10 3282.0 11 3217.5 12 3153.0 13 3002.5 14 2852.0 15 2804.5 16 2757.0 17 2642.5 18 2528.0 19 2463.5 20 2399.0 21 2561.0 22 2723.0 23 2914.5 24 3106.0 25 3647.5 26 4969.0 27 5749.0 28 6912.0 29 8075.0 30 9687.5 31 11300.0 32 12929.5 33 14559.0 34 15861.0 35 17163.0 36 19085.0 37 21007.0 38 25798.0 39 30589.0 40 37006.0 41 43423.0 42 46521.5 43 49620.0 44 51834.0 45 54048.0 46 55752.5 47 57457.0 48 56941.5 49 56426.0 50 54635.5 51 52845.0 52 49821.5 53 46798.0 54 43883.5 55 40969.0 56 39417.0 57 37865.0 58 35469.5 59 33074.0 60 29735.5 61 26397.0 62 23046.5 63 19696.0 64 17040.5 65 14385.0 66 12037.0 67 9689.0 68 8362.5 69 7036.0 70 6172.0 71 5308.0 72 4608.0 73 3908.0 74 3011.5 75 1534.5 76 954.0 77 762.5 78 571.0 79 436.5 80 302.0 81 226.5 82 151.0 83 108.0 84 65.0 85 51.0 86 37.0 87 23.0 88 9.0 89 8.0 90 7.0 91 4.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 713068.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.48096826698185 #Duplication Level Percentage of deduplicated Percentage of total 1 66.92549932735183 23.745815178856848 2 8.827672793334477 6.264287565031992 3 5.1197755894737105 5.44963785672555 4 3.6053347344917297 5.116830692253939 5 2.6114363962842413 4.632814595390131 6 2.2137792921460098 4.712821968884047 7 1.7351442078246113 4.309521760352367 8 1.3934906772020401 3.9553918798512506 9 1.2135596588094306 3.8752444569876054 >10 6.278505518574989 34.20265113057116 >50 0.046616083837019984 1.1070185323213644 >100 0.027564291743825183 1.944941021686159 >500 8.107144630536775E-4 0.17733581895578104 >1k 8.107144630536775E-4 0.5056875421318137 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1790 0.2510279524533425 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1726 0.2420526513600386 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008975301093303864 0.0 2 0.0 0.0 0.0 0.035620726214049714 0.0 3 0.0 0.0 0.0 0.04726056981942816 0.0 4 0.0 0.0 0.0 0.06731475819977899 0.0 5 0.0 0.0 0.0 0.11611795789461875 0.0 6 0.0 0.0 0.0 0.18217056437815188 0.0 7 0.0 0.0 0.0 0.22410204917343088 0.0 8 0.0 0.0 0.0 0.49153797393796944 0.0 9 0.0 0.0 0.0 0.606814497355091 0.0 10 0.0 0.0 0.0 0.7899667352903229 0.0 11 0.0 0.0 0.0 0.9512416768106268 0.0 12 0.0 0.0 0.0 1.0802616300268697 0.0 13 0.0 0.0 0.0 1.1398632388495908 0.0 14 0.0 0.0 0.0 1.1669293812090853 0.0 15 0.0 0.0 0.0 1.1984831741152318 0.0 16 0.0 0.0 0.0 1.2606090863704444 0.0 17 0.0 0.0 0.0 1.338301536459356 0.0 18 0.0 0.0 0.0 1.4645167080839414 0.0 19 0.0 0.0 0.0 1.519069710041679 0.0 20 0.0 0.0 0.0 1.5848418383660465 0.0 21 0.0 0.0 0.0 1.6727717412645078 0.0 22 0.0 0.0 0.0 1.7578968625713116 0.0 23 0.0 0.0 0.0 1.8618140205422204 0.0 24 0.0 0.0 0.0 1.9434331648594525 0.0 25 0.0 0.0 0.0 2.0040164472392537 0.0 26 0.0 0.0 0.0 2.0692276192452894 0.0 27 0.0 0.0 0.0 2.1354204648084054 0.0 28 0.0 0.0 0.0 2.2150762620114772 0.0 29 0.0 0.0 0.0 2.3004818614774467 0.0 30 0.0 0.0 0.0 2.4067830838012645 0.0 31 0.0 0.0 0.0 2.495694660256806 0.0 32 0.0 0.0 0.0 2.5843257585531814 0.0 33 0.0 0.0 0.0 2.675340921202466 0.0 34 0.0 0.0 0.0 2.77463018954714 0.0 35 0.0 0.0 0.0 2.8920102991580046 0.0 36 0.0 0.0 0.0 2.9859704824785296 0.0 37 0.0 0.0 0.0 3.084278077266123 0.0 38 0.0 0.0 0.0 3.1974510144895016 0.0 39 0.0 0.0 0.0 3.360549064044383 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 25 3.88931E-5 45.000004 21 GCGTTAA 25 3.88931E-5 45.000004 1 CGACTAG 25 3.88931E-5 45.000004 2 TACGTTC 20 7.0314837E-4 45.0 31 TGCGTAG 20 7.0314837E-4 45.0 2 TGCGATA 30 2.164339E-6 44.999996 1 CGTTTTA 1030 0.0 43.470875 1 CGTTTTT 1465 0.0 42.696243 1 TCACGAC 250 0.0 42.3 25 AGGCGAT 495 0.0 42.27273 7 AGGTACC 295 0.0 41.949154 7 CGGTCTA 245 0.0 41.32653 31 CGACGGT 240 0.0 41.249996 28 GACGGTC 240 0.0 41.249996 29 AAGGTAC 170 0.0 41.029415 6 TTTAGGC 165 0.0 40.90909 4 CGAAGGA 160 0.0 40.78125 4 ACGGTCT 245 0.0 40.408165 30 GTAAGGC 195 0.0 40.384617 4 TAGGCGA 140 0.0 40.178574 6 >>END_MODULE