SRR1545793_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545793_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	414284
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1004	0.24234583039653956	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	926	0.2235181662820674	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	900	0.21724227824391	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGCG	55	1.8189894E-12	45.0	5
TCGTTAG	20	7.028057E-4	45.0	2
GATCGAC	25	3.8864713E-5	45.0	9
ACGCATG	20	7.028057E-4	45.0	1
CTCCCGT	25	3.8864713E-5	45.0	36
GTTAGGT	25	3.8864713E-5	45.0	4
TTCCGTC	25	3.8864713E-5	45.0	27
TAACGCC	35	1.2094097E-7	45.0	12
ACGGGCT	20	7.028057E-4	45.0	5
ATATCCG	25	3.8864713E-5	45.0	18
CTTGCGG	45	3.8380676E-10	45.0	2
TGCGACA	20	7.028057E-4	45.0	1
ACGGAGA	20	7.028057E-4	45.0	24
AGCGAAC	20	7.028057E-4	45.0	30
GATGCAC	25	3.8864713E-5	45.0	19
GCTAGGC	35	1.2094097E-7	45.0	4
TCGTAGC	20	7.028057E-4	45.0	33
CGTAAAT	20	7.028057E-4	45.0	16
CGGTCTA	175	0.0	45.0	31
TAAGCCG	20	7.028057E-4	45.0	18