##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545793_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 414284 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.038154985468907 31.0 31.0 33.0 30.0 33.0 2 31.186932152822703 31.0 31.0 33.0 30.0 34.0 3 31.11528806326095 31.0 31.0 34.0 28.0 34.0 4 35.05610885286422 35.0 35.0 37.0 32.0 37.0 5 32.75435932838343 35.0 35.0 37.0 28.0 37.0 6 33.96835262766604 35.0 35.0 37.0 28.0 37.0 7 15.410911355495264 0.0 0.0 35.0 0.0 37.0 8 24.992017553176083 17.0 17.0 35.0 17.0 37.0 9 32.87279257707273 32.0 32.0 37.0 28.0 39.0 10 35.65341649689585 37.0 35.0 37.0 32.0 39.0 11 36.56715682961447 37.0 35.0 39.0 32.0 39.0 12 36.1684593177627 37.0 35.0 39.0 32.0 39.0 13 35.60144248872754 37.0 35.0 39.0 30.0 39.0 14 36.63312606810787 39.0 35.0 40.0 31.0 41.0 15 37.125768796284675 39.0 35.0 41.0 32.0 41.0 16 37.2781570130635 39.0 35.0 41.0 32.0 41.0 17 37.26028038736712 39.0 35.0 41.0 32.0 41.0 18 37.160855838024155 39.0 35.0 40.0 32.0 41.0 19 37.05862886329185 39.0 35.0 40.0 32.0 41.0 20 37.14434783868071 39.0 35.0 40.0 32.0 41.0 21 36.96065500960694 39.0 35.0 40.0 32.0 41.0 22 37.0096552123664 39.0 35.0 40.0 32.0 41.0 23 37.02117870832569 38.0 35.0 40.0 32.0 41.0 24 36.85125903969258 38.0 35.0 40.0 32.0 41.0 25 36.604104913537576 38.0 35.0 40.0 31.0 41.0 26 36.47898543028454 38.0 35.0 40.0 31.0 41.0 27 36.3387241602379 38.0 35.0 40.0 31.0 41.0 28 36.31401164418612 38.0 35.0 40.0 31.0 41.0 29 36.37756949339101 38.0 35.0 40.0 31.0 41.0 30 36.10555078158944 38.0 35.0 40.0 30.0 41.0 31 35.93455214297438 38.0 34.0 40.0 30.0 41.0 32 35.76987284085313 38.0 34.0 40.0 30.0 41.0 33 35.56304853675257 38.0 34.0 40.0 29.0 41.0 34 35.41253101736973 38.0 34.0 40.0 28.0 41.0 35 35.220633671587606 38.0 34.0 40.0 27.0 41.0 36 35.00937279740468 38.0 34.0 40.0 25.0 41.0 37 34.8162854466984 37.0 34.0 40.0 25.0 41.0 38 34.762370740844446 37.0 33.0 40.0 25.0 41.0 39 34.70439843199351 37.0 34.0 40.0 24.0 41.0 40 34.5131890200925 37.0 33.0 40.0 23.0 41.0 41 34.441178032460826 37.0 33.0 40.0 23.0 41.0 42 34.38956368095316 37.0 33.0 40.0 23.0 41.0 43 34.28717498141371 37.0 33.0 40.0 23.0 41.0 44 34.047952612217706 36.0 33.0 40.0 23.0 41.0 45 33.94425804520571 36.0 33.0 40.0 23.0 41.0 46 33.960708113274954 36.0 33.0 40.0 23.0 41.0 47 33.9293190178718 36.0 33.0 40.0 23.0 41.0 48 33.91695069083045 36.0 33.0 40.0 23.0 41.0 49 33.849996620675675 36.0 33.0 40.0 23.0 41.0 50 33.67603624566723 36.0 33.0 40.0 22.0 41.0 51 33.42551969180562 35.0 32.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 4.0 15 26.0 16 38.0 17 130.0 18 275.0 19 543.0 20 942.0 21 1598.0 22 2278.0 23 3300.0 24 4903.0 25 6442.0 26 7713.0 27 8244.0 28 8870.0 29 10099.0 30 12135.0 31 15797.0 32 21537.0 33 33235.0 34 42810.0 35 42264.0 36 44793.0 37 69470.0 38 65313.0 39 11521.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.341746241708584 24.694653908912727 29.69339873130509 15.270201118073592 2 32.340375201552554 24.690067683038688 30.462677776597697 12.506879338811059 3 29.3851560765079 22.82419789323266 34.36386633324 13.426779697019436 4 25.374863620125325 28.06842649004065 31.736924428652806 14.819785461181217 5 20.81012059360246 35.99873516718 29.939365266339035 13.251778972878508 6 19.292321209605003 41.01485937183188 29.355707678790395 10.337111739772716 7 38.79585018972492 56.480819920634154 4.158017205588437 0.5653126840524858 8 89.65999169651737 2.3619063251296213 6.73209682246961 1.2460051558834035 9 86.63766884552626 3.5572216160894463 7.781618406696856 2.0234911316874413 10 56.86606289405336 22.59367969798496 11.969808150930279 8.570449257031408 11 53.444497011711775 16.40637823328924 18.635766768690075 11.51335798630891 12 46.55839955199815 19.626632937791467 21.86374564308542 11.951221867124968 13 19.6396674744861 46.65519305597127 22.2472989543405 11.457840515202133 14 13.240434098347992 48.09526798041923 26.97207712583638 11.692220795396395 15 11.19690840100028 21.274294928116944 55.08298655028917 12.445810120593602 16 13.359675971072985 15.093027971150224 53.55166986897877 17.995626188798024 17 14.076334108968727 15.132855722161608 29.044809840592446 41.74600032827722 18 20.09442797694335 21.93350455243263 37.7335354491122 20.238532021511812 19 29.990296511571774 22.41433412827915 26.333626208108445 21.26174315204063 20 32.2450299794344 21.688020778017012 24.914551370557394 21.152397871991194 21 20.5100848693167 28.601152832356547 30.414884475384035 20.473877822942715 22 22.264436956290854 22.477093008660727 25.93800388139537 29.32046615365305 23 17.268588697608404 31.411543771905265 24.593032798756408 26.726834731729927 24 18.278282530824267 22.616610827355146 42.74314238541677 16.36196425640382 25 15.712168464145368 22.910370663602748 41.265170752430706 20.112290119821186 26 15.252821735814079 35.71149259927972 27.751011383495378 21.28467428141082 27 16.209170520705605 36.209701557385756 29.65381236060287 17.92731556130577 28 13.500400691313205 28.245841017273175 42.25579554122293 15.997962750190691 29 14.591439688715955 23.62220119531529 40.565409236176144 21.220949879792606 30 17.342451072211336 30.55826437902502 33.83403655463402 18.26524799412963 31 31.716889862992538 24.890654719950565 24.73303337806915 18.659422038987746 32 32.18613318399938 24.651929594191422 27.58518311110253 15.576754110706664 33 29.68157109615626 25.220138841953826 25.574002375182243 19.52428768670767 34 18.708663622056367 26.88542159484798 28.729808537138773 25.67610624595688 35 19.17911384460901 23.807822653059254 33.114723233337514 23.898340268994218 36 34.66486757876239 21.040397408541 26.722248505855887 17.57248650684072 37 19.945979086810013 32.52213457434996 29.61181218680905 17.920074152030974 38 19.698564269921118 34.01724420928638 23.448407372720162 22.835784148072335 39 19.995220669878634 31.319336493806183 27.494906875476726 21.190535960838456 40 24.574205134641936 24.39389404369949 25.324173755201745 25.707727066456826 41 16.81720751947939 22.209160865493235 28.1294957082581 32.84413590676927 42 22.32091994863427 24.533411862393915 24.120892914039644 29.024775274932175 43 22.37354085603113 24.942068725801626 26.348350406967203 26.336040011200048 44 19.39876992594452 30.16481447509438 29.473501269660424 20.962914329300673 45 16.732241650655105 39.50768072143747 21.865193924940378 21.894883702967046 46 23.375269139044715 31.794131561923706 26.669627598459027 18.160971700572553 47 22.345299359859418 27.073698235992698 25.953693601490762 24.627308802657115 48 23.499097237643742 23.62727018180765 31.071197535989803 21.802435044558806 49 21.56998580683782 22.02981529578743 33.64455301194349 22.75564588543125 50 20.763775574243756 33.20403394772668 26.06569406494096 19.966496413088606 51 18.48683511793842 35.12735225111277 23.36199322204092 23.0238194089079 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 312.0 1 407.5 2 503.0 3 1983.0 4 3463.0 5 2717.5 6 1972.0 7 2085.0 8 2198.0 9 2354.0 10 2510.0 11 2536.0 12 2562.0 13 2496.5 14 2431.0 15 2249.0 16 2067.0 17 1921.5 18 1776.0 19 1707.5 20 1639.0 21 1627.5 22 1616.0 23 1706.5 24 1797.0 25 1991.0 26 2540.0 27 2895.0 28 3383.0 29 3871.0 30 4464.0 31 5057.0 32 5979.0 33 6901.0 34 7541.5 35 8182.0 36 9761.5 37 11341.0 38 17581.5 39 23822.0 40 32259.5 41 40697.0 42 44055.0 43 47413.0 44 45760.0 45 44107.0 46 42002.5 47 39898.0 48 36565.5 49 33233.0 50 31044.5 51 28856.0 52 25505.0 53 22154.0 54 19727.5 55 17301.0 56 15630.0 57 13959.0 58 12693.0 59 11427.0 60 9930.0 61 8433.0 62 7138.5 63 5844.0 64 5033.5 65 4223.0 66 3439.5 67 2656.0 68 2264.0 69 1872.0 70 1608.0 71 1344.0 72 1099.0 73 854.0 74 668.5 75 341.5 76 200.0 77 156.5 78 113.0 79 93.0 80 73.0 81 48.0 82 23.0 83 16.5 84 10.0 85 9.5 86 9.0 87 4.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 414284.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.24872047406862 #Duplication Level Percentage of deduplicated Percentage of total 1 70.64044883722322 20.661427422026872 2 6.93864182651491 4.058927905068311 3 3.6359176323303557 3.190378154843039 4 2.453838463378478 2.8708654121550072 5 1.844743509491785 2.697819362773879 6 1.4895727421390816 2.6140858056370737 7 1.330926985656151 2.7249537962396047 8 1.099027369410604 2.5716115456993367 9 0.9703040623087031 2.554213706398847 >10 9.423310464767507 51.779158234262766 >50 0.15181586498749483 2.8201492264040215 >100 0.018976983123436854 0.7734535573014624 >500 0.001650172445516248 0.4406633995733137 >1k 8.25086222758124E-4 0.24229247161643314 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1004 0.24234583039653956 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 926 0.2235181662820674 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 900 0.21724227824391 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007241409274796999 0.0 2 0.0 0.0 0.0 0.0456208784312211 0.0 3 0.0 0.0 0.0 0.06058645759913489 0.0 4 0.0 0.0 0.0 0.09510384180900058 0.0 5 0.0 0.0 0.0 0.16944897703024978 0.0 6 0.0 0.0 0.0 0.2599665929652123 0.0 7 0.0 0.0 0.0 0.30824265479719226 0.0 8 0.0 0.0 0.0 0.6341060721630573 0.0 9 0.0 0.0 0.0 0.7642100588002433 0.0 10 0.0 0.0 0.0 0.960452250147242 0.0 11 0.0 0.0 0.0 1.1779359087003118 0.0 12 0.0 0.0 0.0 1.3618677042801557 0.0 13 0.0 0.0 0.0 1.440316304757123 0.0 14 0.0 0.0 0.0 1.4651784766005929 0.0 15 0.0 0.0 0.0 1.5047648473028163 0.0 16 0.0 0.0 0.0 1.6114549439514922 0.0 17 0.0 0.0 0.0 1.7285243938940438 0.0 18 0.0 0.0 0.0 1.9308010929700399 0.0 19 0.0 0.0 0.0 2.00273242509969 0.0 20 0.0 0.0 0.0 2.0804568846491778 0.0 21 0.0 0.0 0.0 2.1849745585154143 0.0 22 0.0 0.0 0.0 2.2887680914541715 0.0 23 0.0 0.0 0.0 2.410906527889081 0.0 24 0.0 0.0 0.0 2.4915275511484873 0.0 25 0.0 0.0 0.0 2.553320910293422 0.0 26 0.0 0.0 0.0 2.6213901574765135 0.0 27 0.0 0.0 0.0 2.6897007849687653 0.0 28 0.0 0.0 0.0 2.7601838352434562 0.0 29 0.0 0.0 0.0 2.8388738160295834 0.0 30 0.0 0.0 0.0 2.9455639126782596 0.0 31 2.4138030915989996E-4 0.0 0.0 3.0544264321093744 0.0 32 2.4138030915989996E-4 0.0 0.0 3.134806075059621 0.0 33 2.4138030915989996E-4 0.0 0.0 3.2214616060480252 0.0 34 2.4138030915989996E-4 0.0 0.0 3.3175309690936654 0.0 35 2.4138030915989996E-4 0.0 0.0 3.4423245889293335 0.0 36 2.4138030915989996E-4 0.0 0.0 3.5396008535207732 0.0 37 2.4138030915989996E-4 0.0 0.0 3.637359878730533 0.0 38 2.4138030915989996E-4 0.0 0.0 3.7247395506464165 0.0 39 2.4138030915989996E-4 0.0 0.0 3.8145330256538994 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCG 55 1.8189894E-12 45.0 5 TCGTTAG 20 7.028057E-4 45.0 2 GATCGAC 25 3.8864713E-5 45.0 9 ACGCATG 20 7.028057E-4 45.0 1 CTCCCGT 25 3.8864713E-5 45.0 36 GTTAGGT 25 3.8864713E-5 45.0 4 TTCCGTC 25 3.8864713E-5 45.0 27 TAACGCC 35 1.2094097E-7 45.0 12 ACGGGCT 20 7.028057E-4 45.0 5 ATATCCG 25 3.8864713E-5 45.0 18 CTTGCGG 45 3.8380676E-10 45.0 2 TGCGACA 20 7.028057E-4 45.0 1 ACGGAGA 20 7.028057E-4 45.0 24 AGCGAAC 20 7.028057E-4 45.0 30 GATGCAC 25 3.8864713E-5 45.0 19 GCTAGGC 35 1.2094097E-7 45.0 4 TCGTAGC 20 7.028057E-4 45.0 33 CGTAAAT 20 7.028057E-4 45.0 16 CGGTCTA 175 0.0 45.0 31 TAAGCCG 20 7.028057E-4 45.0 18 >>END_MODULE