##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545789_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 468814 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.000853216840795 31.0 31.0 33.0 30.0 33.0 2 31.170602840358864 31.0 31.0 33.0 30.0 34.0 3 31.106323616615544 31.0 31.0 34.0 28.0 34.0 4 35.07784110542774 35.0 35.0 37.0 32.0 37.0 5 32.793988660748184 35.0 35.0 37.0 28.0 37.0 6 33.983326009888785 35.0 35.0 37.0 28.0 37.0 7 15.27317870200122 0.0 0.0 35.0 0.0 37.0 8 24.90712308079537 17.0 17.0 35.0 17.0 37.0 9 32.72229924874257 32.0 32.0 37.0 27.0 39.0 10 35.46284240658342 37.0 34.0 37.0 32.0 39.0 11 36.42924699347716 37.0 35.0 39.0 32.0 39.0 12 36.338539378090246 37.0 35.0 39.0 32.0 39.0 13 36.06847278451582 37.0 35.0 39.0 32.0 39.0 14 37.068415192379064 39.0 36.0 40.0 31.0 41.0 15 37.410450626474464 39.0 36.0 41.0 32.0 41.0 16 37.433929020891014 39.0 36.0 41.0 32.0 41.0 17 37.37296027848998 39.0 35.0 41.0 32.0 41.0 18 37.32111455715913 39.0 36.0 40.0 32.0 41.0 19 37.28327012418571 39.0 36.0 40.0 32.0 41.0 20 37.39233683294441 39.0 35.0 40.0 32.0 41.0 21 37.242593011300855 39.0 35.0 40.0 32.0 41.0 22 37.303301522565455 39.0 35.0 41.0 32.0 41.0 23 37.292450737392656 39.0 35.0 41.0 32.0 41.0 24 37.11667740297858 39.0 35.0 40.0 32.0 41.0 25 36.867169069183085 39.0 35.0 40.0 31.0 41.0 26 36.76012875042127 38.0 35.0 40.0 31.0 41.0 27 36.6598928359648 38.0 35.0 40.0 31.0 41.0 28 36.576032285725255 38.0 35.0 40.0 31.0 41.0 29 36.54998997470212 38.0 35.0 40.0 31.0 41.0 30 36.276751547522046 38.0 35.0 40.0 30.0 41.0 31 36.15791550593626 38.0 35.0 40.0 30.0 41.0 32 36.06676208475003 38.0 35.0 40.0 30.0 41.0 33 35.900265350437486 38.0 35.0 40.0 29.0 41.0 34 35.73294739491568 38.0 35.0 40.0 29.0 41.0 35 35.5386869846037 38.0 34.0 40.0 27.0 41.0 36 35.330246110397724 38.0 34.0 40.0 26.0 41.0 37 35.18528030306262 38.0 34.0 40.0 26.0 41.0 38 35.057547342869455 38.0 34.0 40.0 25.0 41.0 39 34.95643261506696 38.0 34.0 40.0 25.0 41.0 40 34.795479657177474 38.0 34.0 40.0 24.0 41.0 41 34.63655095624277 38.0 33.0 40.0 24.0 41.0 42 34.60102940611842 38.0 33.0 40.0 24.0 41.0 43 34.51497608859804 37.0 33.0 40.0 23.0 41.0 44 34.29555857973525 37.0 33.0 40.0 23.0 41.0 45 34.198801656947104 37.0 33.0 40.0 23.0 41.0 46 34.18243695794067 37.0 33.0 40.0 23.0 41.0 47 34.10539787634328 37.0 33.0 40.0 23.0 41.0 48 34.03193590635092 37.0 33.0 40.0 23.0 41.0 49 33.92403170553781 36.0 33.0 40.0 23.0 41.0 50 33.78954553404975 36.0 33.0 40.0 23.0 41.0 51 33.59741603279765 36.0 32.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 7.0 15 19.0 16 51.0 17 111.0 18 261.0 19 567.0 20 916.0 21 1585.0 22 2372.0 23 3458.0 24 4844.0 25 6617.0 26 7917.0 27 8900.0 28 9613.0 29 11208.0 30 14001.0 31 17691.0 32 23633.0 33 33945.0 34 43164.0 35 47294.0 36 57349.0 37 84603.0 38 73325.0 39 15359.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.15064396541059 23.768274838208754 27.82724065407603 14.253840542304625 2 34.10286382232612 22.896500531127483 30.720285656998296 12.280349989548094 3 31.105726364826992 23.129642032874447 32.84436898215497 12.920262620143596 4 27.80121754043181 27.348586006390597 29.38777425588826 15.46242219728933 5 21.086187699172807 36.43107927664276 28.561647049789467 13.92108597439496 6 20.44968793594048 42.553976630390736 27.641452686993134 9.354882746675655 7 38.416088256750015 56.81805577478488 4.057259382185686 0.7085965862794199 8 88.29237181483488 2.847611206149987 6.9844330587397145 1.8755839202754185 9 84.05998967607623 4.443979915275568 8.584001331018271 2.9120290776299345 10 46.32604828354102 26.93136297124233 14.454346499891216 12.288242245325439 11 40.907694736078696 22.807126067054313 21.544151838468988 14.741027358398002 12 37.00230795155435 21.81398166437009 26.02162051474572 15.16208986932984 13 23.757396323488635 33.53611453582871 27.081955743642467 15.62453339704019 14 18.280170814011527 36.84638257389924 29.26576424765472 15.607682364434508 15 16.800266203654328 23.739692074042157 42.93963064242962 16.520411079873895 16 19.174128758953444 18.960184636124346 41.763897835815484 20.101788769106722 17 19.605429871974813 19.124002269556797 29.666349554407507 31.60421830406089 18 22.899486790070263 23.232454662190122 33.01458574189337 20.85347280584624 19 29.11623799630557 24.653487310532533 26.174772937668244 20.055501755493648 20 30.222220326184797 23.906922574837782 24.78509600822501 21.08576109075241 21 24.960432069008178 26.439056854104187 29.182575605677304 19.41793547121033 22 23.253571778999774 23.006778807800107 26.769678379911866 26.969971033288253 23 20.864564624776563 28.80353402415457 26.141710785087476 24.190190565981393 24 20.963111169888272 25.51758266604666 34.88505036112402 18.634255802941038 25 21.10837133703345 23.9617417568588 33.388721326581546 21.541165579526208 26 19.183940752622576 30.087412065339347 27.586420200761925 23.142226981276156 27 19.23342732938863 29.97905352655851 29.9090897456134 20.878429398439465 28 18.15880071840858 26.744508483108444 35.94495898160038 19.151731816882602 29 18.776956319563837 25.350565469461234 34.814233363338126 21.058244847636804 30 21.688345484563172 27.119497284637404 31.77422175958909 19.41793547121033 31 29.467123422082103 24.377684966745875 26.1099284577679 20.04526315340412 32 29.055659600609197 24.75224715985444 27.383141288442754 18.80895195109361 33 27.885046095039822 23.942970986361328 26.522032191871403 21.649950726727443 34 21.75041700973094 26.03527198419842 28.30973477754504 23.9045762285256 35 21.06123110657958 24.938888343778128 30.798141693720748 23.20173885592154 36 29.938099118200395 24.35720776256682 25.99709053057289 19.707602588659896 37 21.30205155989369 30.639016752912667 26.88635578289044 21.172575904303198 38 21.809715580166124 31.575422235684087 24.684843029431715 21.930019154718075 39 21.840857994855103 28.46054085415538 25.74261860780608 23.95598254318344 40 24.515052878113707 24.481350812902345 26.985968849053144 24.017627459930804 41 20.260700405704608 23.8478373086128 27.64785181329909 28.2436104723835 42 22.557773445332263 25.94589752012525 25.13043552453638 26.3658935100061 43 22.201342110090568 24.93611538904555 26.683716783201866 26.178825717662015 44 21.20393162320238 27.191807411894697 29.4389672663359 22.165293698567023 45 20.394228841288868 32.156676208475005 25.404744738851655 22.044350211384472 46 23.18958051594022 29.017691451193862 27.564876475531875 20.227851557334038 47 22.595101682117004 26.81852504404732 26.920911064942597 23.66546220889308 48 22.530470506426855 25.473002086115176 29.89927775194427 22.0972496555137 49 22.222885835320618 24.460233696092693 31.30644562662378 22.010434841962912 50 21.022623044533653 29.343406980166975 27.529681280849122 22.10428869445025 51 20.669177968234738 30.490130414194116 26.427325122543273 22.41336649502788 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 451.0 2 644.0 3 2554.0 4 4464.0 5 3340.0 6 2216.0 7 2246.5 8 2277.0 9 2300.0 10 2323.0 11 2314.0 12 2305.0 13 2230.0 14 2155.0 15 2129.0 16 2103.0 17 2043.0 18 1983.0 19 1928.0 20 1873.0 21 1895.5 22 1918.0 23 2120.0 24 2322.0 25 2658.0 26 3499.0 27 4004.0 28 4626.0 29 5248.0 30 6144.5 31 7041.0 32 8307.5 33 9574.0 34 10441.5 35 11309.0 36 13162.5 37 15016.0 38 18808.5 39 22601.0 40 28076.0 41 33551.0 42 36060.0 43 38569.0 44 39298.5 45 40028.0 46 39777.5 47 39527.0 48 38268.5 49 37010.0 50 35140.5 51 33271.0 52 30502.0 53 27733.0 54 25526.0 55 23319.0 56 22002.5 57 20686.0 58 19437.0 59 18188.0 60 16503.5 61 14819.0 62 13067.5 63 11316.0 64 9826.5 65 8337.0 66 7138.0 67 5939.0 68 5163.0 69 4387.0 70 3770.0 71 3153.0 72 2640.0 73 2127.0 74 1607.5 75 797.5 76 507.0 77 424.0 78 341.0 79 258.0 80 175.0 81 119.0 82 63.0 83 41.0 84 19.0 85 18.5 86 18.0 87 14.0 88 10.0 89 6.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 468814.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.27848478483761 #Duplication Level Percentage of deduplicated Percentage of total 1 68.92071216014047 26.381804317821096 2 9.371148170111178 7.1742670529211905 3 4.934746025849315 5.6668380200253265 4 3.255214692364784 4.984187442922608 5 2.3642922287347714 4.525076205226687 6 1.8585957147112742 4.2686536672043935 7 1.4375823085795654 3.8519930768140225 8 1.189556330909596 3.6427531130744177 9 1.0010886574909013 3.448814124963507 >10 5.6099014005440155 33.322416605396334 >50 0.03773822445006977 0.9525612108937807 >100 0.017759164447090147 1.1645719353522193 >500 5.549738889715671E-4 0.12427482345513467 >1k 0.0011099477779431342 0.4917884039292936 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1216 0.25937791960137707 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1099 0.2344213270081525 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 585 0.12478296296612303 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012798252611910053 0.0 2 0.0 0.0 0.0 0.04991318518644921 0.0 3 0.0 0.0 0.0 0.062071525167763764 0.0 4 0.0 0.0 0.0 0.08553498828959887 0.0 5 0.0 0.0 0.0 0.14291382083299561 0.0 6 0.0 0.0 0.0 0.21757029440247092 0.0 7 0.0 0.0 0.0 0.26599035011753064 0.0 8 0.0 0.0 0.0 0.6475915821626487 0.0 9 0.0 0.0 0.0 0.8231409471560149 0.0 10 0.0 0.0 0.0 1.0972368572610887 0.0 11 0.0 0.0 0.0 1.335924268473211 0.0 12 0.0 0.0 0.0 1.547095436569727 0.0 13 0.0 0.0 0.0 1.6366832048530975 0.0 14 0.0 0.0 0.0 1.666332490070689 0.0 15 0.0 0.0 0.0 1.7126195036837637 0.0 16 0.0 0.0 0.0 1.8235376929869842 0.0 17 0.0 0.0 0.0 1.9380820538635792 0.0 18 0.0 0.0 0.0 2.1277094967300463 0.0 19 0.0 0.0 0.0 2.213884397650241 0.0 20 0.0 0.0 0.0 2.303472165933611 0.0 21 0.0 0.0 0.0 2.4075646205104797 0.0 22 0.0 0.0 0.0 2.520189243495288 0.0 23 0.0 0.0 0.0 2.6588369801243137 0.0 24 0.0 0.0 0.0 2.7661289978541594 0.0 25 0.0 0.0 0.0 2.8414253840542303 0.0 26 0.0 0.0 0.0 2.918428203935889 0.0 27 0.0 0.0 0.0 3.010149014321245 0.0 28 0.0 0.0 0.0 3.1042161710187837 0.0 29 0.0 0.0 0.0 3.2115081887486294 0.0 30 0.0 0.0 0.0 3.340770540128921 0.0 31 0.0 0.0 0.0 3.4508355125913477 0.0 32 0.0 0.0 0.0 3.562180310314965 0.0 33 0.0 0.0 0.0 3.6790710175037433 0.0 34 0.0 0.0 0.0 3.7848699057622 0.0 35 0.0 0.0 0.0 3.927570422384997 0.0 36 0.0 0.0 0.0 4.032942702223057 0.0 37 0.0 0.0 0.0 4.154952710456599 0.0 38 0.0 0.0 0.0 4.288694450251059 0.0 39 0.0 0.0 0.0 4.483654498372489 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 20 7.0290075E-4 45.000004 2 CCTAGTG 20 7.0290075E-4 45.000004 13 GCGAATA 35 1.2098644E-7 45.000004 1 TAACGCC 20 7.0290075E-4 45.000004 12 CGTTCGA 20 7.0290075E-4 45.000004 14 GTCAACG 20 7.0290075E-4 45.000004 1 TTCGAAT 20 7.0290075E-4 45.000004 16 AGTACGG 20 7.0290075E-4 45.000004 2 TCAACGG 20 7.0290075E-4 45.000004 2 TTAGGCG 45 3.8380676E-10 45.0 5 TAACGGG 50 2.1827873E-11 45.0 3 CGTTTTA 730 0.0 44.075344 1 GTAAGGC 80 0.0 42.187504 4 GTTTTAT 860 0.0 41.598835 2 ACTAACC 125 0.0 41.399998 14 ACGGTCT 125 0.0 41.399998 30 CACGACG 120 0.0 41.249996 26 AGGACTA 220 0.0 40.909092 7 AGGCGAT 385 0.0 40.909092 7 CGTTTTT 1100 0.0 40.909092 1 >>END_MODULE