##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545787_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 434253 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.998811752595838 31.0 31.0 33.0 30.0 33.0 2 31.157539498863567 31.0 31.0 33.0 30.0 34.0 3 31.11159623537431 31.0 31.0 34.0 28.0 34.0 4 35.08856588210099 35.0 35.0 37.0 32.0 37.0 5 32.81361786792492 35.0 35.0 37.0 28.0 37.0 6 33.989142274204205 35.0 35.0 37.0 28.0 37.0 7 15.296115398166506 0.0 0.0 35.0 0.0 37.0 8 24.90032308354807 17.0 17.0 35.0 17.0 37.0 9 32.724699656651765 32.0 32.0 37.0 27.0 39.0 10 35.48075430682114 37.0 34.0 37.0 32.0 39.0 11 36.422497944746496 37.0 35.0 39.0 32.0 39.0 12 36.31314924709789 37.0 35.0 39.0 32.0 39.0 13 36.00858255440953 37.0 35.0 39.0 31.0 39.0 14 36.957748133000806 39.0 35.0 40.0 31.0 41.0 15 37.28711833884855 39.0 36.0 41.0 32.0 41.0 16 37.327937861108616 39.0 35.0 41.0 32.0 41.0 17 37.285626121178204 39.0 35.0 41.0 32.0 41.0 18 37.2384853990646 39.0 35.0 40.0 32.0 41.0 19 37.199047559832636 39.0 35.0 40.0 32.0 41.0 20 37.30168818637983 39.0 35.0 40.0 32.0 41.0 21 37.186260083407596 39.0 35.0 40.0 32.0 41.0 22 37.26890545373319 39.0 35.0 41.0 32.0 41.0 23 37.261260140977726 39.0 35.0 41.0 32.0 41.0 24 37.102249149689236 39.0 35.0 40.0 32.0 41.0 25 36.835998830175036 38.0 35.0 40.0 31.0 41.0 26 36.725464187927315 38.0 35.0 40.0 31.0 41.0 27 36.63349245716207 38.0 35.0 40.0 31.0 41.0 28 36.54189378081441 38.0 35.0 40.0 31.0 41.0 29 36.502911896981715 38.0 35.0 40.0 31.0 41.0 30 36.2078534863317 38.0 35.0 40.0 30.0 41.0 31 36.062207975534996 38.0 35.0 40.0 30.0 41.0 32 35.973764142101494 38.0 34.0 40.0 30.0 41.0 33 35.80139457873636 38.0 34.0 40.0 29.0 41.0 34 35.611958927169184 38.0 34.0 40.0 28.0 41.0 35 35.43799582271164 38.0 34.0 40.0 27.0 41.0 36 35.22684241674784 38.0 34.0 40.0 26.0 41.0 37 35.08942482838346 38.0 34.0 40.0 25.0 41.0 38 34.92439200189751 38.0 34.0 40.0 25.0 41.0 39 34.81688324548132 38.0 34.0 40.0 24.0 41.0 40 34.63819478506769 38.0 33.0 40.0 24.0 41.0 41 34.46991270066067 37.0 33.0 40.0 23.0 41.0 42 34.434205405604565 37.0 33.0 40.0 23.0 41.0 43 34.33907422631508 37.0 33.0 40.0 23.0 41.0 44 34.02172466281177 37.0 33.0 40.0 23.0 41.0 45 33.98291548935759 37.0 33.0 40.0 23.0 41.0 46 34.007417335055834 36.0 33.0 40.0 23.0 41.0 47 33.91074788199506 36.0 33.0 40.0 23.0 41.0 48 33.83926420773144 36.0 33.0 40.0 23.0 41.0 49 33.742516459299075 36.0 33.0 40.0 22.0 41.0 50 33.614376872468355 36.0 33.0 40.0 22.0 41.0 51 33.45269693013059 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 4.0 14 9.0 15 26.0 16 66.0 17 128.0 18 282.0 19 494.0 20 878.0 21 1473.0 22 2280.0 23 3359.0 24 4739.0 25 6297.0 26 7806.0 27 8410.0 28 9343.0 29 10828.0 30 13177.0 31 16718.0 32 22350.0 33 31902.0 34 40393.0 35 44184.0 36 52801.0 37 76261.0 38 66354.0 39 13689.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.61185069533199 23.945948559940863 27.626061305275957 13.816139439451195 2 34.15566501555545 23.69402168781793 29.994496295938085 12.155817000688538 3 31.68936081040315 23.206517859404542 32.15222462481549 12.95189670537682 4 27.874994530838016 27.10286399863674 29.64677273386712 15.375368736658125 5 21.26663488795702 36.14367661248166 28.423752973497017 14.165935526064299 6 20.3535726868899 41.908288486205045 27.828017307882728 9.91012151902232 7 38.536751617144844 56.706343997623506 3.979707681927356 0.777196703304295 8 88.62137970261576 2.845345915860109 6.901276444837457 1.6319979366866781 9 84.82405418039714 3.8634160270625646 8.314507902075519 2.9980218904647753 10 48.77387145281668 24.486186623926606 14.160869354961278 12.579072568295441 11 41.66557283426942 22.231970763587125 20.898416360969296 15.204040041174155 12 37.68056870073436 20.746891788888043 26.378631811409477 15.193907698968111 13 24.560567226939135 31.74278588748955 27.409367350369486 16.28727953520183 14 18.85352547938644 35.18686111552482 29.612460938669393 16.347152466419345 15 17.30995525649794 23.00064708821816 42.4697123566216 17.219685298662302 16 20.608262925069027 17.96717581686252 40.60374942717724 20.82081183089121 17 20.342288942160447 18.448692352154158 29.104462145339237 32.10455656034616 18 23.35689102896238 22.30911473265585 33.82705473537316 20.506939503008613 19 29.182987797436056 24.27824332819808 25.43655426675233 21.102214607613533 20 29.947749353487485 24.313706525919223 24.67570747928051 21.06283664131278 21 25.561366300290384 25.996596454140793 29.016955553559793 19.425081692009037 22 23.955159780128174 21.869048688207105 27.498946466691077 26.67684506497364 23 21.602383863784475 28.534748176754103 25.840466271965884 24.022401687495538 24 22.082058155038652 25.357568053646144 33.50834651689223 19.052027274422976 25 22.604794900668505 23.277213974342146 32.00162117475296 22.116369950236383 26 19.746322996041478 29.284541500001147 26.712768823704153 24.256366680253215 27 20.223233921239462 28.177122552981785 29.86553921331574 21.734104312463014 28 18.57350438569221 26.54673657982789 34.7104107513362 20.169348283143698 29 20.287021621036587 25.53350235922377 32.943468438905434 21.236007580834215 30 22.29069229228123 26.696418907871678 30.86956221373255 20.143326586114547 31 29.805666282098226 24.007894015700526 25.801318586169813 20.38512111603144 32 29.938768413804855 24.832528502969467 25.711739469848222 19.516963613377456 33 28.49513992994867 24.41134545990471 25.623772317059412 21.46974229308721 34 21.224954116609442 25.788192597402897 28.345918162914245 24.640935123073415 35 21.825295392317383 24.52164982164775 30.068186057436563 23.584868728598305 36 30.787121793056123 23.838177283749335 24.884111336018407 20.49058958717614 37 22.32085903839467 30.153389844169183 26.05831162939577 21.467439488040384 38 22.649008757567593 30.634676098956138 23.924302192500686 22.792012950975582 39 22.12673257294711 28.005103015983767 24.7599901439944 25.108174267074723 40 25.060736483110073 23.291261085127793 26.60545810852199 25.04254432324014 41 20.17878978383569 22.54331000591821 27.495492259120834 29.78240795112527 42 22.16449857571508 25.20304983500402 25.234828544650238 27.397623044630663 43 21.741243008108178 24.413648264951537 26.99670468597799 26.848404040962297 44 21.52155540664083 26.192795444130496 29.243091009158256 23.042558140070422 45 20.890126262800717 29.92426074200984 24.96079474407776 24.224818251111678 46 23.393045068197573 27.750643058309326 27.659451978454957 21.196859895038145 47 22.552290945600838 26.960320366238115 26.887321446253683 23.600067241907368 48 22.12535088991901 26.317146916659183 28.816611514485796 22.74089067893601 49 22.339281478769287 24.484804940898506 30.494665552109023 22.681248028223177 50 21.35045699166154 28.29686841541682 27.673268808735923 22.679405784185715 51 20.520526052784895 30.15937713729093 26.130619707866153 23.189477102058017 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 158.0 1 351.0 2 544.0 3 2366.5 4 4189.0 5 3036.5 6 1884.0 7 1940.0 8 1996.0 9 2006.0 10 2016.0 11 1964.0 12 1912.0 13 1820.5 14 1729.0 15 1671.5 16 1614.0 17 1580.0 18 1546.0 19 1607.0 20 1668.0 21 1697.5 22 1727.0 23 1947.5 24 2168.0 25 2370.5 26 2904.0 27 3235.0 28 3859.0 29 4483.0 30 5161.5 31 5840.0 32 6873.5 33 7907.0 34 8920.0 35 9933.0 36 11296.5 37 12660.0 38 15746.0 39 18832.0 40 23188.0 41 27544.0 42 30251.5 43 32959.0 44 33378.5 45 33798.0 46 34884.5 47 35971.0 48 35180.0 49 34389.0 50 32616.0 51 30843.0 52 28641.5 53 26440.0 54 25044.0 55 23648.0 56 23011.5 57 22375.0 58 21191.5 59 20008.0 60 18178.0 61 16348.0 62 14566.5 63 12785.0 64 11017.0 65 9249.0 66 7835.0 67 6421.0 68 5581.0 69 4741.0 70 4045.0 71 3349.0 72 2828.0 73 2307.0 74 1782.0 75 905.5 76 554.0 77 451.5 78 349.0 79 262.5 80 176.0 81 129.0 82 82.0 83 56.0 84 30.0 85 18.0 86 6.0 87 5.0 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 434253.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.35352868677625 #Duplication Level Percentage of deduplicated Percentage of total 1 68.34587038305229 26.896511707421393 2 9.480578031929507 7.461883990935172 3 5.228513109310564 6.172813219093168 4 3.5050725391342485 5.517478908722053 5 2.6029961952087377 5.121854271985825 6 1.9811886723446397 4.678005915061856 7 1.6074554585999312 4.4281331151909225 8 1.2772471500934408 4.0211345889044345 9 0.9747713792076108 3.452462409122565 >10 4.9372174141368275 29.25388678409343 >50 0.03802800350338837 1.0181050388589576 >100 0.01930652485556634 1.3786551272472682 >500 0.001170092415488869 0.3471963814109687 >1k 5.850462077444345E-4 0.2518785419519892 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1094 0.25192687212293297 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 999 0.2300502241780713 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 509 0.11721277688352182 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011053464224772195 0.0 2 0.0 0.0 0.0 0.04375329588972327 0.0 3 0.0 0.0 0.0 0.05826096768473678 0.0 4 0.0 0.0 0.0 0.07990733512491566 0.0 5 0.0 0.0 0.0 0.1367866197815559 0.0 6 0.0 0.0 0.0 0.21485171086900953 0.0 7 0.0 0.0 0.0 0.2650528608898499 0.0 8 0.0 0.0 0.0 0.5869850064363401 0.0 9 0.0 0.0 0.0 0.7419637860878336 0.0 10 0.0 0.0 0.0 1.0090891715198282 0.0 11 0.0 0.0 0.0 1.243514725286872 0.0 12 0.0 0.0 0.0 1.4569847531277849 0.0 13 0.0 0.0 0.0 1.5470244304587417 0.0 14 0.0 0.0 0.0 1.5873235187782238 0.0 15 0.0 0.0 0.0 1.636603546780333 0.0 16 0.0 0.0 0.0 1.732169956223676 0.0 17 0.0 0.0 0.0 1.8480010500791013 0.0 18 0.0 0.0 0.0 2.0285409657503806 0.0 19 0.0 0.0 0.0 2.1165081185391927 0.0 20 0.0 0.0 0.0 2.2113836864684875 0.0 21 0.0 0.0 0.0 2.3113254255008027 0.0 22 0.0 0.0 0.0 2.4310712879358345 0.0 23 0.0 0.0 0.0 2.5584164070253976 0.0 24 0.0 0.0 0.0 2.663194036656051 0.0 25 0.0 0.0 0.0 2.7477069818746216 0.0 26 0.0 0.0 0.0 2.843273391317964 0.0 27 0.0 0.0 0.0 2.9445968133783764 0.0 28 0.0 0.0 0.0 3.042005466859181 0.0 29 0.0 0.0 0.0 3.152770389611586 0.0 30 0.0 0.0 0.0 3.304064681188155 0.0 31 0.0 0.0 0.0 3.4224288605950908 0.0 32 0.0 0.0 0.0 3.5377993934411505 0.0 33 0.0 0.0 0.0 3.6633022684932515 0.0 34 0.0 0.0 0.0 3.784890374965746 0.0 35 0.0 0.0 0.0 3.9557585094403493 0.0 36 0.0 0.0 0.0 4.084715592062691 0.0 37 0.0 0.0 0.0 4.225416980423854 0.0 38 0.0 0.0 0.0 4.402502688524892 0.0 39 0.0 0.0 0.0 4.739403066875761 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTAATA 20 7.028432E-4 45.000004 1 GCGAATA 20 7.028432E-4 45.000004 1 GTTACGG 20 7.028432E-4 45.000004 2 CCGTAAG 20 7.028432E-4 45.000004 2 AACGCGT 20 7.028432E-4 45.000004 14 CGATGTA 20 7.028432E-4 45.000004 10 CGGTCTA 80 0.0 45.000004 31 TCGACAA 40 6.7975634E-9 45.000004 19 CACCACT 20 7.028432E-4 45.000004 39 TTCTCGT 20 7.028432E-4 45.000004 31 CAACCCG 25 3.8867838E-5 45.0 23 AGGATCG 50 2.1827873E-11 45.0 7 TACCGGG 50 2.1827873E-11 45.0 3 CGAAGGA 85 0.0 45.0 4 ACGGTCT 85 0.0 45.0 30 AGGCGAT 345 0.0 44.347824 7 ATAGGCG 125 0.0 43.199997 5 TCACGAC 100 0.0 42.75 25 CGTTTTA 575 0.0 42.652176 1 CGACGGT 90 0.0 42.5 28 >>END_MODULE