##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545786_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1181931 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.514091770162555 31.0 31.0 33.0 30.0 34.0 2 31.69614216058298 31.0 31.0 34.0 30.0 34.0 3 31.76138031746354 31.0 31.0 34.0 30.0 34.0 4 35.65670246401863 37.0 35.0 37.0 33.0 37.0 5 27.082401595355396 35.0 25.0 37.0 0.0 37.0 6 31.317707209642524 35.0 26.0 37.0 17.0 37.0 7 15.023937945616115 0.0 0.0 32.0 0.0 37.0 8 25.11042607394171 17.0 17.0 35.0 17.0 37.0 9 33.22046887677876 32.0 32.0 37.0 28.0 39.0 10 36.0358481163452 37.0 35.0 39.0 32.0 39.0 11 36.997758752414484 39.0 37.0 39.0 34.0 39.0 12 36.916286991372594 39.0 35.0 39.0 33.0 39.0 13 36.36414900700633 39.0 35.0 39.0 32.0 39.0 14 37.64618323743095 40.0 36.0 41.0 33.0 41.0 15 37.95169684186302 40.0 36.0 41.0 33.0 41.0 16 38.04411678854349 40.0 36.0 41.0 33.0 41.0 17 38.084809519337426 40.0 36.0 41.0 34.0 41.0 18 38.06659779631806 40.0 36.0 41.0 34.0 41.0 19 38.00239438681277 40.0 36.0 41.0 34.0 41.0 20 38.01959589857614 40.0 36.0 41.0 34.0 41.0 21 37.86980373642793 40.0 36.0 41.0 33.0 41.0 22 37.813970527890376 40.0 35.0 41.0 33.0 41.0 23 37.73320862216153 40.0 35.0 41.0 33.0 41.0 24 37.59902566224255 39.0 35.0 41.0 33.0 41.0 25 37.416083510797165 39.0 35.0 41.0 33.0 41.0 26 37.18991463968709 39.0 35.0 40.0 33.0 41.0 27 36.957675194237225 39.0 35.0 40.0 32.0 41.0 28 37.01118762431987 39.0 35.0 40.0 32.0 41.0 29 36.94589616483534 39.0 35.0 40.0 32.0 41.0 30 36.74849547054777 38.0 35.0 40.0 32.0 41.0 31 36.551906160342696 38.0 35.0 40.0 31.0 41.0 32 36.35642266765149 38.0 35.0 40.0 31.0 41.0 33 36.17604919407309 38.0 35.0 40.0 30.0 41.0 34 35.949004637326546 38.0 35.0 40.0 30.0 41.0 35 35.816200776525875 38.0 35.0 40.0 30.0 41.0 36 35.60862097702827 38.0 35.0 40.0 29.0 41.0 37 35.47754902781973 38.0 34.0 40.0 29.0 41.0 38 35.288785893592774 38.0 34.0 40.0 28.0 41.0 39 35.251624671829404 38.0 34.0 40.0 28.0 41.0 40 35.013472021632396 37.0 34.0 40.0 27.0 41.0 41 34.820750111470126 37.0 34.0 40.0 26.0 40.0 42 34.83616217867202 37.0 34.0 40.0 27.0 41.0 43 34.71776778847496 37.0 34.0 40.0 26.0 41.0 44 34.52329535311283 37.0 34.0 40.0 26.0 40.0 45 34.25006620521841 36.0 33.0 39.0 25.0 40.0 46 34.237039218025416 36.0 33.0 39.0 25.0 40.0 47 34.083086914549156 36.0 33.0 39.0 24.0 40.0 48 34.00933895464287 36.0 33.0 39.0 24.0 40.0 49 33.91661865201945 36.0 33.0 39.0 24.0 40.0 50 33.96011019255777 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 4.0 14 11.0 15 30.0 16 59.0 17 177.0 18 446.0 19 908.0 20 1624.0 21 2742.0 22 4374.0 23 6568.0 24 9751.0 25 13684.0 26 17241.0 27 18978.0 28 20807.0 29 23968.0 30 29647.0 31 40246.0 32 55491.0 33 101871.0 34 102854.0 35 125012.0 36 160800.0 37 287490.0 38 126807.0 39 30338.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.89349209048582 22.655721865320395 28.101471236476577 14.349314807717201 2 33.34873186336596 23.20930748072434 30.525893643537565 12.916067012372126 3 30.7066994604592 23.52074698099974 32.760880288274016 13.011673270267046 4 26.8598589934607 26.346377241987902 31.079563866249384 15.714199898302017 5 17.385278836074185 47.97995822091137 23.11090918166966 11.523853761344782 6 20.58842690478547 41.33117753912877 28.118138876127286 9.962256679958474 7 39.605103851240045 55.75646970931467 3.6194160234396087 1.019010416005672 8 88.00945232843542 3.001698068668983 7.090177006948799 1.8986725959468023 9 84.32404260485595 4.271907581745466 8.659727175275037 2.7443226381235455 10 52.504418616653595 22.022013129362037 13.865530221307335 11.608038032677035 11 46.50889095894769 20.679464368055324 19.257130915425687 13.554513757571296 12 40.407942595633756 21.022547001474706 24.482055213036972 14.08745518985457 13 22.800146539857234 37.59804929390971 25.019142403405954 14.582661762827104 14 17.18425187257124 39.6013811296937 28.752947507087978 14.461419490647085 15 15.447348449274958 22.60411140751871 46.77024293296309 15.178297210243239 16 17.860433477081152 17.1709685252354 45.03976966506505 19.9288283326184 17 18.601678101344326 17.476739335883398 28.86615208502019 35.05543047775209 18 23.212691773039204 22.03123532592004 34.27763549648837 20.47843740455238 19 30.470898893421023 23.053122390393348 25.224145910378866 21.25183280580677 20 31.1876920057093 23.41422638038938 24.673436943442553 20.724644670458765 21 24.29642677956666 26.237741458680752 29.346467771807323 20.119363989945267 22 24.280605212994665 23.020210147631293 26.161256452364817 26.537928187009225 23 20.643337047594148 29.402223987694715 25.472129929750555 24.482309034960586 24 21.05545924423676 24.593990681351112 36.34036166239823 18.0101884120139 25 20.27918719451474 23.160658278698165 34.64753864650305 21.912615880284044 26 18.74314152010566 30.755856306332603 27.43671161852934 23.0642905550324 27 19.064057038862675 30.523016995069934 29.856396016349517 20.556529949717877 28 17.253799079641706 26.812648115668342 37.539416429554684 18.39413637513527 29 18.07965101177649 24.64280909799303 35.946091607716525 21.331448282513954 30 20.98489674947184 27.54170928759801 31.564702169585196 19.90869179334496 31 30.319197990407226 24.931066195911605 24.47723259648829 20.272503217192885 32 30.323005319261448 24.73959985819815 26.58395456249138 18.353440260049023 33 28.75066310977544 24.52918148352146 25.54556907298311 21.17458633371999 34 20.62963066371895 26.83549208879368 28.56698064438618 23.967896603101195 35 22.388447379753977 24.66861432689387 30.173758028175925 22.769180265176225 36 31.607513467368232 23.301360231688655 25.444547947384404 19.64657835355871 37 21.89027955100594 30.46506098917788 27.043456851542096 20.60120260827409 38 22.08631468334446 31.856089737895022 23.19450120184681 22.86309437691371 39 21.235334380771807 28.832816805718775 26.518383898890885 23.413464914618533 40 24.181107018937652 24.734608027033726 25.260527052763653 25.823757901264965 41 19.352314136781253 23.11996216361192 27.79341602851605 29.734307671090782 42 23.356947232960298 25.296315943993346 24.541026506623485 26.80571031642287 43 23.158712310617116 25.772147443463282 25.813943453551857 25.255196792367745 44 21.74627791300846 28.438546751037073 27.47554637284241 22.33962896311206 45 19.447243536213197 33.80484986010182 23.58310256690111 23.164804036783874 46 23.580564347664964 29.483277788635714 26.845560358430397 20.09059750526892 47 23.23037470038437 26.470665377251297 26.680406893465015 23.61855302889932 48 23.647319513575667 25.315944839419558 28.89288799430762 22.143847652697154 49 22.853956787663577 23.52599263408778 30.758732954800237 22.861317623448407 50 21.062143221558618 30.36708572666256 26.83261544032604 21.738155611452783 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 574.0 1 1103.5 2 1633.0 3 6089.5 4 10546.0 5 7880.0 6 5214.0 7 5386.5 8 5559.0 9 5933.5 10 6308.0 11 6294.5 12 6281.0 13 6038.5 14 5796.0 15 5391.0 16 4986.0 17 4867.0 18 4748.0 19 4620.5 20 4493.0 21 4664.5 22 4836.0 23 5203.0 24 5570.0 25 6338.5 26 7107.0 27 8373.5 28 9640.0 29 11208.0 30 12776.0 31 15205.0 32 17634.0 33 19443.0 34 21252.0 35 23715.0 36 26178.0 37 33781.0 38 41384.0 39 55447.0 40 69510.0 41 85201.0 42 100892.0 43 105346.0 44 109800.0 45 107715.0 46 105630.0 47 103516.5 48 101403.0 49 96955.5 50 92508.0 51 84166.5 52 75825.0 53 70063.5 54 64302.0 55 60503.5 56 56705.0 57 53186.0 58 49667.0 59 45695.0 60 41723.0 61 38051.5 62 34380.0 63 29286.0 64 24192.0 65 20867.5 66 17543.0 67 15194.0 68 12845.0 69 10904.5 70 8964.0 71 7454.5 72 5945.0 73 4794.0 74 3643.0 75 2875.5 76 2108.0 77 1511.5 78 915.0 79 710.5 80 506.0 81 366.0 82 226.0 83 171.0 84 116.0 85 80.5 86 45.0 87 29.5 88 14.0 89 8.5 90 3.0 91 2.0 92 1.0 93 3.0 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1181931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.763092510291372 #Duplication Level Percentage of deduplicated Percentage of total 1 71.58988997357369 16.29607288270039 2 6.9150887743014104 3.1481761097260073 3 3.1086104722293557 2.1228476327345214 4 2.0921693592261867 1.9049697868505089 5 1.5865175446995956 1.8057022819598607 6 1.263815071643052 1.7261003635026788 7 1.053020152194194 1.6778996597718279 8 0.9253345199666382 1.6850780224773316 9 0.8037436891060379 1.6466122754715249 >10 9.458572974787787 47.0952242246404 >50 1.0932706062760134 16.310850749517574 >100 0.10796746450518341 3.752230080700029 >500 3.9987949816734056E-4 0.05070089163431899 >1k 0.0015995179926693622 0.7775350383130212 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3268 0.2764966821244218 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2559 0.21651010084345026 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1415 0.1197193406383283 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1300 0.10998950023309313 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006683977321857198 0.0 2 0.0 0.0 0.0 0.02411308274340888 0.0 3 0.0 0.0 0.0 0.03299685006992794 0.0 4 0.0 0.0 0.0 0.054656320885060124 0.0 5 0.0 0.0 0.0 0.093744897121744 0.0 6 0.0 0.0 0.0 0.17877524153271215 0.0 7 0.0 0.0 0.0 0.2412154347419604 0.0 8 0.0 0.0 0.0 0.6240635028609961 0.0 9 0.0 0.0 0.0 0.7890477532106358 0.0 10 0.0 0.0 0.0 1.053953234156647 0.0 11 0.0 0.0 0.0 1.2255368545202723 0.0 12 0.0 0.0 0.0 1.4063426714419032 0.0 13 0.0 0.0 0.0 1.4770743808225693 0.0 14 0.0 0.0 0.0 1.5024565731840522 0.0 15 0.0 0.0 0.0 1.539176144800331 0.0 16 0.0 0.0 0.0 1.6228527722853534 0.0 17 0.0 0.0 0.0 1.7204049982613199 0.0 18 0.0 0.0 0.0 1.8794667370599467 0.0 19 0.0 0.0 0.0 1.9378457794913577 0.0 20 0.0 0.0 0.0 2.0111157081081723 0.0 21 0.0 0.0 0.0 2.0982612352159307 0.0 22 0.0 0.0 0.0 2.1831223650111555 0.0 23 0.0 0.0 0.0 2.2871893536932357 0.0 24 0.0 0.0 0.0 2.366127971937448 0.0 25 0.0 0.0 0.0 2.4307679551513584 0.0 26 0.0 0.0 0.0 2.496761655291214 0.0 27 8.460730787161011E-5 0.0 0.0 2.5651243600514753 0.0 28 8.460730787161011E-5 0.0 0.0 2.641017115212309 0.0 29 8.460730787161011E-5 0.0 0.0 2.7260474596232775 0.0 30 8.460730787161011E-5 0.0 0.0 2.836967640242958 0.0 31 8.460730787161011E-5 0.0 0.0 2.938581016996762 0.0 32 8.460730787161011E-5 0.0 0.0 3.027757119493439 0.0 33 8.460730787161011E-5 0.0 0.0 3.1189637973790347 0.0 34 8.460730787161011E-5 0.0 0.0 3.219646493746251 0.0 35 8.460730787161011E-5 0.0 0.0 3.3466420628615374 0.0 36 8.460730787161011E-5 0.0 0.0 3.442502142680072 0.0 37 8.460730787161011E-5 0.0 0.0 3.5445385559732334 0.0 38 8.460730787161011E-5 0.0 0.0 3.681010143570141 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 20 7.856571E-4 44.000004 6 GTCGAAA 20 7.856571E-4 44.000004 1 TAGGTCG 20 7.856571E-4 44.000004 6 CGTCTAG 20 7.856571E-4 44.000004 2 CGATCTA 20 7.856571E-4 44.000004 10 AGTACGT 20 7.856571E-4 44.000004 25 GTCGACC 25 4.442916E-5 44.0 35 TACGATA 25 4.442916E-5 44.0 1 AACGCAT 45 4.802132E-10 44.0 29 CGGTCAT 25 4.442916E-5 44.0 33 CGACTCA 25 4.442916E-5 44.0 35 GCGTATG 45 4.802132E-10 44.0 1 CGTTTTA 2135 0.0 43.0726 1 CGGTCTA 165 0.0 42.666664 31 AGGCGAT 935 0.0 42.117645 7 AGTACGG 105 0.0 41.904762 2 TAACGCC 90 0.0 41.555557 12 GTTTTAT 2490 0.0 41.349396 2 CCCGACG 80 0.0 41.250004 10 CGTTATT 1350 0.0 40.577778 1 >>END_MODULE