SRR1545785_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545785_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	451513
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1025	0.22701450456576	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	802	0.17762500747486784	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	795	0.17607466451685777	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	75	0.0	45.000004	25
ACGTTAG	20	7.02873E-4	45.000004	2
ACCGCTC	20	7.02873E-4	45.000004	18
CGGCATA	20	7.02873E-4	45.000004	42
ATTACCG	20	7.02873E-4	45.000004	10
ATTCGAT	20	7.02873E-4	45.000004	14
TACGAAG	35	1.2097371E-7	45.000004	2
GTCGTAC	20	7.02873E-4	45.000004	20
TGTTACG	20	7.02873E-4	45.000004	1
ACGCTAC	20	7.02873E-4	45.000004	24
CTACCGA	20	7.02873E-4	45.000004	27
CTATTCG	20	7.02873E-4	45.000004	10
TTGTTCG	20	7.02873E-4	45.000004	28
CGCCGAC	20	7.02873E-4	45.000004	13
GCGTATG	20	7.02873E-4	45.000004	1
GCCCGAC	20	7.02873E-4	45.000004	9
GTTGCGA	20	7.02873E-4	45.000004	1
ATAGGCC	25	3.8870312E-5	45.0	5
GCCTCTA	25	3.8870312E-5	45.0	30
CATACTC	25	3.8870312E-5	45.0	15