##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545785_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 451513 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.986049128153564 31.0 31.0 33.0 30.0 33.0 2 31.148697822654054 31.0 31.0 33.0 30.0 34.0 3 31.101518671666152 31.0 31.0 34.0 28.0 34.0 4 35.07906084653155 35.0 35.0 37.0 32.0 37.0 5 32.8030687931466 35.0 35.0 37.0 28.0 37.0 6 33.96233331044732 35.0 35.0 37.0 28.0 37.0 7 15.367333830919597 0.0 0.0 35.0 0.0 37.0 8 24.931897863405926 17.0 17.0 35.0 17.0 37.0 9 32.70558101317127 32.0 32.0 37.0 27.0 39.0 10 35.47617012134756 37.0 34.0 37.0 32.0 39.0 11 36.42563558524339 37.0 35.0 39.0 32.0 39.0 12 36.212955108712265 37.0 35.0 39.0 32.0 39.0 13 35.822078212587456 37.0 35.0 39.0 31.0 39.0 14 36.82298405583006 39.0 35.0 40.0 31.0 41.0 15 37.207225484094586 39.0 35.0 40.0 32.0 41.0 16 37.27925220314808 39.0 35.0 41.0 32.0 41.0 17 37.26233353192488 39.0 35.0 41.0 32.0 41.0 18 37.18147871711335 39.0 35.0 40.0 32.0 41.0 19 37.11809848221424 39.0 35.0 40.0 32.0 41.0 20 37.2111943620671 39.0 35.0 40.0 32.0 41.0 21 37.047774925638905 39.0 35.0 40.0 32.0 41.0 22 37.14208893210162 39.0 35.0 40.0 32.0 41.0 23 37.12853671987296 39.0 35.0 40.0 32.0 41.0 24 36.969099450071205 39.0 35.0 40.0 32.0 41.0 25 36.71762717795501 38.0 35.0 40.0 31.0 41.0 26 36.598543120574604 38.0 35.0 40.0 31.0 41.0 27 36.47452897258772 38.0 35.0 40.0 31.0 41.0 28 36.416202855731726 38.0 35.0 40.0 31.0 41.0 29 36.41278545689714 38.0 35.0 40.0 31.0 41.0 30 36.14087523504307 38.0 35.0 40.0 30.0 41.0 31 35.99313419547167 38.0 35.0 40.0 30.0 41.0 32 35.903384841632466 38.0 34.0 40.0 30.0 41.0 33 35.742344074257 38.0 34.0 40.0 29.0 41.0 34 35.58525889620011 38.0 34.0 40.0 28.0 41.0 35 35.43644369043638 38.0 34.0 40.0 27.0 41.0 36 35.22352401813458 38.0 34.0 40.0 26.0 41.0 37 35.061752374793194 38.0 34.0 40.0 26.0 41.0 38 34.95830241875649 38.0 34.0 40.0 25.0 41.0 39 34.871879657950046 38.0 34.0 40.0 25.0 41.0 40 34.7189361103667 37.0 33.0 40.0 24.0 41.0 41 34.569762110946975 37.0 33.0 40.0 24.0 41.0 42 34.5479620741817 37.0 33.0 40.0 24.0 41.0 43 34.45243880021173 37.0 33.0 40.0 23.0 41.0 44 34.241953166354016 37.0 33.0 40.0 23.0 41.0 45 34.13402050439301 37.0 33.0 40.0 23.0 41.0 46 34.12087138133343 36.0 33.0 40.0 23.0 41.0 47 34.05871591737115 36.0 33.0 40.0 23.0 41.0 48 33.998086433834686 36.0 33.0 40.0 23.0 41.0 49 33.93047154788456 36.0 33.0 40.0 23.0 41.0 50 33.78846899203345 36.0 33.0 40.0 23.0 41.0 51 33.58895978631845 36.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 9.0 15 32.0 16 68.0 17 145.0 18 334.0 19 606.0 20 976.0 21 1610.0 22 2374.0 23 3483.0 24 4848.0 25 6470.0 26 7572.0 27 8584.0 28 9461.0 29 11061.0 30 13713.0 31 17563.0 32 23240.0 33 34478.0 34 44166.0 35 46127.0 36 52715.0 37 79179.0 38 69201.0 39 13496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.51550675174358 23.35104415598222 28.186563842015623 13.946885250258575 2 33.236030856254416 22.89856548980871 30.917825178898507 12.947578475038371 3 31.151484010427165 23.175412446596223 32.548343015594234 13.124760527382378 4 27.319036218226273 26.912181930531347 29.783195611200565 15.985586240041815 5 21.226631348377566 36.27160236803813 28.199631018375992 14.30213526520831 6 20.69508519134554 41.96977717142142 27.603191934672978 9.73194570256006 7 38.655808359892184 56.69537754173191 3.8654479494499605 0.7833661489259446 8 88.41871662609935 3.2428745130262033 6.535360000708729 1.8030488601657098 9 84.69922239226777 4.359564397924312 8.069535096442406 2.8716781133655065 10 52.55042490470928 22.503006557950712 13.433500253591813 11.513068283748197 11 46.80330355936596 21.097066972601013 18.711310637788944 13.388318830244089 12 40.63005937813529 21.479558728098638 24.02079231384257 13.869589579923502 13 22.938652929151544 38.396458130773645 24.298303703326372 14.366585236748444 14 17.07149074334515 40.578233627824666 28.241268800676835 14.109006828153342 15 15.389147156338797 23.007975407131134 46.58581259011368 15.017064846416384 16 17.768259164187963 17.554533313548003 44.98187206126955 19.695335460994478 17 18.537672226491818 17.759843016701623 28.446135548699598 35.25634920810696 18 23.12491556167818 22.2040118446202 34.47785556562048 20.19321702808114 19 30.963671034942514 23.14108342395457 24.93505170393765 20.960193837165264 20 31.668191170575376 23.5922332247355 24.217021436813557 20.522554167875565 21 24.275048558956218 26.865450164225614 28.94933257735658 19.91016869946159 22 24.136182125431603 23.32003729682202 25.647766509491422 26.89601406825496 23 20.41004356463712 29.95041117310022 25.158744045021958 24.4808012172407 24 20.60295052412666 24.931286585325342 36.670704940943004 17.795057949604995 25 20.160216870832066 23.37540668817952 34.971529058963974 21.492847382024436 26 18.433577770739713 31.54261339097656 27.089142505309926 22.9346663329738 27 18.878969154819465 31.515814605559527 29.411777733974436 20.193438505646572 28 16.912248373800974 27.26433125956506 37.620400741506884 18.203019625127073 29 17.824957420938045 25.026300460894813 35.98102380219396 21.167718315973183 30 20.838381176178757 28.39873934969757 31.2336521872017 19.529227286921973 31 30.809744126968656 25.21101275046344 24.100302759831944 19.878940362735957 32 30.904979480103563 24.852883527163115 26.241547862409277 18.000589130324045 33 29.412442166670726 24.48345894802586 24.986877454248273 21.117221431055142 34 20.702615428570162 26.864785731529324 28.004730760797585 24.427868079102925 35 22.285737066263874 24.71379561607307 30.306990053442533 22.693477264220522 36 32.049575538245854 23.60507892353044 25.086985313822634 19.25836022440107 37 21.612888222487502 31.458008960982298 26.745187846197123 20.18391497033308 38 21.938238766104188 32.72486063524195 22.865343854994208 22.47155674365965 39 21.155537049874535 29.502805013366174 26.17288981712597 23.16876811963332 40 24.384901431409507 24.882782998496168 25.094958506178116 25.637357063916212 41 19.25592397118134 23.265110860595374 27.558896421586976 29.920068746636307 42 23.043633295165368 25.22806652300155 24.415243857873417 27.313056323959668 43 22.73644391191394 25.661055163417224 25.742337429930036 25.860163494738803 44 21.417102054647373 28.474484677074635 27.87583081771732 22.23258245056067 45 19.411622699678635 34.598782316345265 23.38448726836215 22.605107715613947 46 23.36654758556232 30.14974098198723 26.660140461071997 19.823570971378455 47 22.966116147264863 26.921041033148548 26.26413857408314 23.848704245503452 48 23.11096247505609 25.742115952364603 29.204031777601084 21.942889794978218 49 22.62947024781125 24.00085933295387 31.04805398737135 22.321616431863532 50 20.925421859392753 31.348820521225303 26.603442204321915 21.12231541506003 51 20.086464841543876 32.355657533670126 24.846903632896506 22.710973991889492 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 225.0 1 419.5 2 614.0 3 1965.0 4 3316.0 5 2549.0 6 1782.0 7 1845.0 8 1908.0 9 1992.0 10 2076.0 11 2048.0 12 2020.0 13 2004.0 14 1988.0 15 1878.0 16 1768.0 17 1747.0 18 1726.0 19 1686.0 20 1646.0 21 1675.0 22 1704.0 23 1918.5 24 2133.0 25 2354.5 26 3087.5 27 3599.0 28 4099.0 29 4599.0 30 5414.0 31 6229.0 32 7198.5 33 8168.0 34 8944.0 35 9720.0 36 11606.0 37 13492.0 38 18062.0 39 22632.0 40 29051.5 41 35471.0 42 38783.5 43 42096.0 44 41193.0 45 40290.0 46 39309.0 47 38328.0 48 36813.5 49 35299.0 50 33219.5 51 31140.0 52 28869.5 53 26599.0 54 24670.0 55 22741.0 56 21208.0 57 19675.0 58 18372.5 59 17070.0 60 15493.0 61 13916.0 62 12148.5 63 10381.0 64 9071.5 65 7762.0 66 6693.5 67 5625.0 68 4707.0 69 3789.0 70 3232.0 71 2675.0 72 2412.5 73 2150.0 74 1717.0 75 974.0 76 664.0 77 493.5 78 323.0 79 244.5 80 166.0 81 121.5 82 77.0 83 60.0 84 43.0 85 29.5 86 16.0 87 12.0 88 8.0 89 5.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 451513.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.972048703347276 #Duplication Level Percentage of deduplicated Percentage of total 1 69.64662683522472 22.963919720348823 2 8.000266516406409 5.2757035443742115 3 4.3364919501738575 4.289490713484175 4 2.8235313192262286 3.7239044869181432 5 2.128180450454413 3.508523473094721 6 1.7156004839747256 3.3940117627860484 7 1.4621733737535376 3.3747596184497466 8 1.1421651128339851 3.0127618982101025 9 1.031326133260697 3.0604441945415872 >10 7.610582835809994 44.20790306091263 >50 0.08310886200117512 1.7421537027235388 >100 0.017951514192253826 0.8716249052508859 >500 0.001329741792018802 0.35009682436762196 >1k 6.64870896009401E-4 0.22470209453776613 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1025 0.22701450456576 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 802 0.17762500747486784 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 795 0.17607466451685777 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007087282093760312 0.0 2 0.0 0.0 0.0 0.027020262982461192 0.0 3 0.0 0.0 0.0 0.03587936559966158 0.0 4 0.0 0.0 0.0 0.06024189779696266 0.0 5 0.0 0.0 0.0 0.10852400706070478 0.0 6 0.0 0.0 0.0 0.17075920294653754 0.0 7 0.0 0.0 0.0 0.2130614179436694 0.0 8 0.0 0.0 0.0 0.5406267372146538 0.0 9 0.0 0.0 0.0 0.6797146483047 0.0 10 0.0 0.0 0.0 0.8859102617200391 0.0 11 0.0 0.0 0.0 1.041830467782766 0.0 12 0.0 0.0 0.0 1.1835761096579722 0.0 13 0.0 0.0 0.0 1.2402743664080547 0.0 14 0.0 0.0 0.0 1.2590999594696055 0.0 15 0.0 0.0 0.0 1.294314892372977 0.0 16 0.0 0.0 0.0 1.3696172646191804 0.0 17 0.0 0.0 0.0 1.4531143067862942 0.0 18 0.0 0.0 0.0 1.5924236954417703 0.0 19 0.0 0.0 0.0 1.6460212662758327 0.0 20 0.0 0.0 0.0 1.7080349845962353 0.0 21 0.0 0.0 0.0 1.7804581484918485 0.0 22 0.0 0.0 0.0 1.858196773957782 0.0 23 0.0 0.0 0.0 1.9543180373544062 0.0 24 0.0 0.0 0.0 2.0260767685537293 0.0 25 0.0 0.0 0.0 2.0825535477383816 0.0 26 0.0 0.0 0.0 2.136151118572444 0.0 27 0.0 0.0 0.0 2.199272224719997 0.0 28 0.0 0.0 0.0 2.2728027764427603 0.0 29 0.0 0.0 0.0 2.3487695813852536 0.0 30 0.0 0.0 0.0 2.446884142870748 0.0 31 0.0 0.0 0.0 2.538797332524202 0.0 32 0.0 0.0 0.0 2.623180284953036 0.0 33 0.0 0.0 0.0 2.7104424457324594 0.0 34 0.0 0.0 0.0 2.8003623372970434 0.0 35 0.0 0.0 0.0 2.9113225975774784 0.0 36 0.0 0.0 0.0 3.0003565788803424 0.0 37 0.0 0.0 0.0 3.088061694790626 0.0 38 0.0 0.0 0.0 3.200793775594501 0.0 39 0.0 0.0 0.0 3.3890497062100096 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 75 0.0 45.000004 25 ACGTTAG 20 7.02873E-4 45.000004 2 ACCGCTC 20 7.02873E-4 45.000004 18 CGGCATA 20 7.02873E-4 45.000004 42 ATTACCG 20 7.02873E-4 45.000004 10 ATTCGAT 20 7.02873E-4 45.000004 14 TACGAAG 35 1.2097371E-7 45.000004 2 GTCGTAC 20 7.02873E-4 45.000004 20 TGTTACG 20 7.02873E-4 45.000004 1 ACGCTAC 20 7.02873E-4 45.000004 24 CTACCGA 20 7.02873E-4 45.000004 27 CTATTCG 20 7.02873E-4 45.000004 10 TTGTTCG 20 7.02873E-4 45.000004 28 CGCCGAC 20 7.02873E-4 45.000004 13 GCGTATG 20 7.02873E-4 45.000004 1 GCCCGAC 20 7.02873E-4 45.000004 9 GTTGCGA 20 7.02873E-4 45.000004 1 ATAGGCC 25 3.8870312E-5 45.0 5 GCCTCTA 25 3.8870312E-5 45.0 30 CATACTC 25 3.8870312E-5 45.0 15 >>END_MODULE