##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545784_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1485097 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49986229855693 31.0 31.0 33.0 30.0 34.0 2 31.691328579884008 31.0 31.0 34.0 30.0 34.0 3 31.719852642621998 31.0 31.0 34.0 30.0 34.0 4 35.644547123857905 37.0 35.0 37.0 33.0 37.0 5 27.332814624229933 35.0 28.0 37.0 0.0 37.0 6 31.45997601503471 35.0 29.0 37.0 17.0 37.0 7 14.768520170736322 0.0 0.0 32.0 0.0 37.0 8 24.96726005102697 17.0 17.0 35.0 17.0 37.0 9 33.13809064323745 32.0 32.0 37.0 28.0 39.0 10 35.98744593787477 37.0 35.0 39.0 32.0 39.0 11 36.97946060089004 38.0 37.0 39.0 34.0 39.0 12 37.105704206526575 39.0 37.0 39.0 34.0 39.0 13 36.735924993451604 39.0 35.0 39.0 33.0 39.0 14 38.05176092874741 40.0 37.0 41.0 33.0 41.0 15 38.27130753075388 40.0 37.0 41.0 33.0 41.0 16 38.30700284223859 40.0 37.0 41.0 34.0 41.0 17 38.30864650591847 40.0 37.0 41.0 34.0 41.0 18 38.26288383856408 40.0 37.0 41.0 34.0 41.0 19 38.20726794276737 40.0 37.0 41.0 34.0 41.0 20 38.23873659431 40.0 37.0 41.0 34.0 41.0 21 38.114144732633626 40.0 37.0 41.0 34.0 41.0 22 38.00862098569993 40.0 36.0 41.0 34.0 41.0 23 37.88515497640895 40.0 36.0 41.0 33.0 41.0 24 37.71206863928754 40.0 35.0 41.0 33.0 41.0 25 37.531128943092604 39.0 35.0 41.0 33.0 41.0 26 37.282615883002926 39.0 35.0 40.0 33.0 41.0 27 37.090343593718124 39.0 35.0 40.0 32.0 41.0 28 37.09207681383775 39.0 35.0 40.0 32.0 41.0 29 36.96565476867841 39.0 35.0 40.0 32.0 41.0 30 36.737390217608684 38.0 35.0 40.0 31.0 41.0 31 36.56395844850538 38.0 35.0 40.0 31.0 41.0 32 36.32840211784146 38.0 35.0 40.0 31.0 41.0 33 36.07981431515921 38.0 35.0 40.0 30.0 41.0 34 35.740153000107064 38.0 35.0 40.0 29.0 41.0 35 35.4980368285708 38.0 35.0 40.0 27.0 41.0 36 35.288826925109944 38.0 35.0 40.0 26.0 41.0 37 35.19833115277992 38.0 34.0 40.0 26.0 41.0 38 34.97757722222858 38.0 34.0 40.0 25.0 41.0 39 34.870035425295455 38.0 34.0 40.0 25.0 41.0 40 34.62510462279568 38.0 34.0 40.0 24.0 41.0 41 34.39476613312127 37.0 34.0 40.0 23.0 40.0 42 34.3797374851609 37.0 34.0 40.0 23.0 40.0 43 34.25376120213023 37.0 33.0 40.0 23.0 40.0 44 34.018052692854404 37.0 33.0 40.0 23.0 40.0 45 33.80516828193714 36.0 33.0 39.0 23.0 40.0 46 33.739410287678176 36.0 33.0 39.0 23.0 40.0 47 33.535909102233724 36.0 33.0 39.0 23.0 40.0 48 33.42938138047548 36.0 33.0 39.0 22.0 40.0 49 33.28174051930615 35.0 33.0 39.0 22.0 40.0 50 33.371036370014885 36.0 33.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 6.0 13 6.0 14 16.0 15 45.0 16 107.0 17 248.0 18 597.0 19 1295.0 20 2392.0 21 4034.0 22 6185.0 23 9861.0 24 14602.0 25 21317.0 26 26761.0 27 28608.0 28 28798.0 29 31051.0 30 36729.0 31 47555.0 32 64824.0 33 108258.0 34 119409.0 35 154960.0 36 216571.0 37 366943.0 38 153675.0 39 40241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.31291222054856 22.993043552037342 24.21053978292327 17.48350444449083 2 35.29203816316375 23.95392354842815 28.488711511773307 12.265326776634792 3 30.38131515988518 24.046106079266202 33.48219005223228 12.09038870861634 4 26.683980911684557 26.474162967132784 31.890307501799548 14.951548619383113 5 16.97377343028772 47.61884240558024 24.220236119256857 11.187148044875183 6 20.450516026899255 39.89665321524453 29.633417884488356 10.019412873367868 7 38.02041213469558 56.31611941846223 4.757534356341707 0.9059340905004858 8 85.95721356921467 2.7805591149938356 9.574324101388664 1.68790321440283 9 81.79371448464309 4.3317035856917085 11.055102797999053 2.819479131666147 10 44.35467851594879 25.639402678747587 17.126894741555603 12.879024063748023 11 37.02936575860028 23.68303215210858 23.385879844885554 15.901722244405583 12 33.531345090590044 21.15740587988529 28.877170986137607 16.434078043387064 13 24.735353986978627 28.280913637291032 29.328656646670215 17.655075729060123 14 19.805507653708815 31.48669750191402 31.318425665124906 17.389369179252263 15 18.473136771537483 22.907863930773544 40.0136826079374 18.60531668975158 16 21.823894331481377 18.81702003303488 38.40806358103208 20.951022054451663 17 21.77689403453108 18.92226568365568 30.92457933724194 28.376260944571296 18 23.47644631966801 22.344331717052825 32.949362903567916 21.229859059711252 19 28.09654857561493 24.445675939012737 27.155599937243156 20.302175548129178 20 29.365354586266086 23.63892728892456 26.546683482627735 20.449034642181623 21 25.855213497838864 24.273767976098533 29.921008526715763 19.950009999346843 22 24.317132146923736 21.621685317524715 28.56581085275911 25.495371682792438 23 22.744036248137327 26.07203435196489 27.868482664768703 23.315446735129086 24 23.12380942120279 24.25336526839661 33.087603031990504 19.535222278410096 25 23.810767916169787 22.75986013034839 31.281189040177175 22.148182913304655 26 21.30621770833824 26.645868923040045 28.5152417653527 23.532671603269012 27 21.138888570914897 25.36460581362699 30.76842792086982 22.7280776945883 28 20.651445663145235 25.01607639096975 33.35378093148124 20.978697014403775 29 21.420621009940767 24.97143284243386 32.74836593165295 20.859580215972425 30 23.118287896346164 24.532538952001115 32.338830392896895 20.010342758755826 31 28.22906517217394 23.65737726222597 27.079712638299046 21.033844927301047 32 27.68485829545141 24.563311352726455 27.810573989443117 19.941256362379022 33 27.037291166839605 23.76740374534458 26.79818220628013 22.397122881535683 34 22.323727002343954 25.840399650662548 28.798186246420265 23.03768710057323 35 22.731511813706444 24.762422925909892 29.722435638884193 22.783629621499472 36 28.13782534070165 25.39847565512556 25.841746364042212 20.621952640130576 37 23.316591441501803 28.50817152010946 25.990558192495172 22.18467884589357 38 24.14354079228495 28.995951106224037 24.60068264901215 22.25982545247886 39 23.241781513261422 26.6910511569278 24.87972166127869 25.18744566853209 40 24.500083159551195 23.986042662533155 27.673343896055275 23.840530281860378 41 21.950216046493935 23.426617924620412 28.435044983593667 26.18812104529199 42 23.460757108794912 26.313634732276746 25.13815595883636 25.08745220009198 43 23.44129710045876 25.390799388861467 26.077219198476598 25.090684312203177 44 22.82564707894501 26.280640254474964 28.292899386370046 22.60081328020998 45 22.379076922248174 28.34414183046629 26.15505923182122 23.12172201546431 46 24.12576417567337 26.844037796857712 27.667014343170848 21.36318368429806 47 23.388371264637932 26.905111248625513 27.473693637519975 22.232823849216583 48 23.457457661014736 25.72141752356917 27.93460629171024 22.88651852370586 49 23.18394017360482 24.74787842140951 29.237551486535896 22.83062991844977 50 21.97513024401773 26.472210232732273 28.38447589618725 23.168183627062746 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 978.0 1 1835.5 2 2693.0 3 14523.0 4 26353.0 5 18833.0 6 11313.0 7 11095.5 8 10878.0 9 11016.5 10 11155.0 11 10872.5 12 10590.0 13 10258.5 14 9927.0 15 9356.0 16 8785.0 17 8219.0 18 7653.0 19 7406.5 20 7160.0 21 7014.0 22 6868.0 23 7341.5 24 7815.0 25 8972.0 26 10129.0 27 11443.5 28 12758.0 29 14807.5 30 16857.0 31 19283.0 32 21709.0 33 24814.5 34 27920.0 35 30628.0 36 33336.0 37 39574.5 38 45813.0 39 55688.5 40 65564.0 41 76101.0 42 86638.0 43 91032.0 44 95426.0 45 101129.5 46 106833.0 47 111237.0 48 115641.0 49 112899.5 50 110158.0 51 101431.5 52 92705.0 53 88030.5 54 83356.0 55 82853.5 56 82351.0 57 82005.5 58 81660.0 59 76971.0 60 72282.0 61 65691.0 62 59100.0 63 51969.0 64 44838.0 65 38309.5 66 31781.0 67 27703.5 68 23626.0 69 20361.5 70 17097.0 71 14238.0 72 11379.0 73 9059.0 74 6739.0 75 5320.5 76 3902.0 77 2868.5 78 1835.0 79 1285.5 80 736.0 81 561.0 82 386.0 83 300.5 84 215.0 85 162.5 86 110.0 87 69.0 88 28.0 89 22.5 90 17.0 91 9.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1485097.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.749827748608148 #Duplication Level Percentage of deduplicated Percentage of total 1 70.69421062774795 21.031405889993252 2 8.103809978347318 4.821739019265692 3 4.115292829961402 3.6728775847930164 4 2.675921839395586 3.184328551630294 5 1.9322614947301395 2.874222331674488 6 1.5576431924710488 2.780377000188347 7 1.2555760352159244 2.6147219541067876 8 1.0213698809177278 2.430846241993505 9 0.8408187336716413 2.2512791245080743 >10 7.480291588842651 45.08194561855596 >50 0.2799534205141621 5.15738309669239 >100 0.03721217054313985 1.962675501033846 >500 0.004510566113090584 0.9247269479577716 >1k 8.457311462044845E-4 0.5079037181962873 >5k 2.819103820681615E-4 0.7035674194102798 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8389 0.5648789271003847 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3613 0.2432837720364394 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00430948281492724 0.0 2 0.0 0.0 0.0 0.016766581576826294 0.0 3 0.0 0.0 0.0 0.024375512171932203 0.0 4 0.0 0.0 0.0 0.03535122621620002 0.0 5 0.0 0.0 0.0 0.06639296961747279 0.0 6 0.0 0.0 0.0 0.12551368698475587 0.0 7 0.0 0.0 0.0 0.16746380876131323 0.0 8 0.0 0.0 0.0 0.3943176775658425 0.0 9 0.0 0.0 0.0 0.5141078326870231 0.0 10 0.0 0.0 0.0 0.7316020435028823 0.0 11 6.733566898323813E-5 0.0 0.0 0.8745556687542969 0.0 12 6.733566898323813E-5 0.0 0.0 1.0224247978414878 0.0 13 6.733566898323813E-5 0.0 0.0 1.0850469699958993 0.0 14 1.3467133796647626E-4 0.0 0.0 1.112991272623943 0.0 15 1.3467133796647626E-4 0.0 0.0 1.1467937784535287 0.0 16 1.3467133796647626E-4 0.0 0.0 1.2043657754341972 0.0 17 1.3467133796647626E-4 0.0 0.0 1.2694120316720052 0.0 18 1.3467133796647626E-4 0.0 0.0 1.3723009338783931 0.0 19 1.3467133796647626E-4 0.0 0.0 1.4246880843473524 0.0 20 1.3467133796647626E-4 0.0 0.0 1.4815867246381886 0.0 21 1.3467133796647626E-4 0.0 0.0 1.5497304216492256 0.0 22 1.3467133796647626E-4 0.0 0.0 1.6180761256672123 0.0 23 1.3467133796647626E-4 0.0 0.0 1.6989462641160813 0.0 24 1.3467133796647626E-4 0.0 0.0 1.7615011006015096 0.0 25 1.3467133796647626E-4 0.0 0.0 1.8118008453319885 0.0 26 1.3467133796647626E-4 0.0 0.0 1.8589358136202552 0.0 27 1.3467133796647626E-4 0.0 0.0 1.9165078106009237 0.0 28 1.3467133796647626E-4 0.0 0.0 1.9791973184243183 0.0 29 1.3467133796647626E-4 0.0 0.0 2.044916931351959 0.0 30 1.3467133796647626E-4 0.0 0.0 2.1336653430718666 0.0 31 1.3467133796647626E-4 0.0 0.0 2.2052431592010486 0.0 32 1.3467133796647626E-4 0.0 0.0 2.27991841610346 0.0 33 1.3467133796647626E-4 0.0 0.0 2.3593071698346977 0.0 34 1.3467133796647626E-4 0.0 0.0 2.4307503146259135 0.0 35 1.3467133796647626E-4 0.0 0.0 2.5250875868714298 0.0 36 1.3467133796647626E-4 0.0 0.0 2.599493501097908 0.0 37 1.3467133796647626E-4 0.0 0.0 2.6866931924312016 0.0 38 1.3467133796647626E-4 0.0 0.0 2.7906594653413213 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAA 20 7.8572263E-4 44.0 1 ACGTTAG 40 8.314601E-9 44.0 2 CGCTTAG 25 4.4434702E-5 44.0 2 CGTTTTA 4925 0.0 43.59797 1 AGGCGAT 980 0.0 41.97959 7 CGTTATT 2530 0.0 41.913044 1 GTTTTAT 5580 0.0 41.437275 2 GTTATTT 2760 0.0 41.050724 2 AGGTACC 600 0.0 39.6 7 CGCATCG 100 0.0 39.6 21 TTACTGG 2520 0.0 39.19841 40 TTACGGG 320 0.0 39.1875 3 TCGTTAG 45 2.3517714E-8 39.11111 2 CGGTCTA 335 0.0 38.74627 31 ACGTAAC 40 4.1256317E-7 38.5 16 CGTTTTT 2280 0.0 38.30702 1 CGTTAAG 115 0.0 38.26087 2 ACATACG 260 0.0 38.076923 17 CGAAGGA 330 0.0 38.0 4 GCCAGTA 1085 0.0 37.917053 25 >>END_MODULE