##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545783_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 562374 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.984734358274032 31.0 31.0 33.0 30.0 33.0 2 31.14915874489219 31.0 31.0 33.0 30.0 34.0 3 31.05922037647544 31.0 31.0 34.0 28.0 34.0 4 35.05172892061155 35.0 35.0 37.0 32.0 37.0 5 32.85651185865634 35.0 35.0 37.0 28.0 37.0 6 34.02252060016999 35.0 35.0 37.0 28.0 37.0 7 14.839604960400019 0.0 0.0 35.0 0.0 37.0 8 24.652306116570113 17.0 17.0 35.0 17.0 37.0 9 32.56906258112929 32.0 32.0 37.0 27.0 39.0 10 35.40733568763847 37.0 34.0 37.0 32.0 39.0 11 36.39062083239979 37.0 35.0 39.0 32.0 39.0 12 36.40360151785111 37.0 35.0 39.0 32.0 39.0 13 36.223330025925804 38.0 35.0 39.0 32.0 39.0 14 37.273376791956956 39.0 36.0 40.0 32.0 41.0 15 37.52623876637256 39.0 36.0 41.0 32.0 41.0 16 37.518452133277854 39.0 36.0 41.0 32.0 41.0 17 37.42793941398429 39.0 36.0 41.0 32.0 41.0 18 37.34809219487387 39.0 36.0 40.0 32.0 41.0 19 37.28805030104521 39.0 36.0 40.0 32.0 41.0 20 37.39460572501574 39.0 35.0 40.0 32.0 41.0 21 37.280349020402795 39.0 35.0 40.0 32.0 41.0 22 37.30968714769886 39.0 35.0 40.0 32.0 41.0 23 37.25613026206759 39.0 35.0 40.0 32.0 41.0 24 37.05630950221739 39.0 35.0 40.0 32.0 41.0 25 36.81630729727903 38.0 35.0 40.0 31.0 41.0 26 36.689274397465034 38.0 35.0 40.0 31.0 41.0 27 36.6136539029187 38.0 35.0 40.0 31.0 41.0 28 36.49376038010292 38.0 35.0 40.0 31.0 41.0 29 36.416086092173536 38.0 35.0 40.0 30.0 41.0 30 36.10792461955923 38.0 35.0 40.0 30.0 41.0 31 35.972873923758925 38.0 35.0 40.0 30.0 41.0 32 35.8278441037459 38.0 34.0 40.0 29.0 41.0 33 35.621613019094056 38.0 34.0 40.0 27.0 41.0 34 35.356894166515524 38.0 34.0 40.0 26.0 41.0 35 35.12466792561534 38.0 34.0 40.0 25.0 41.0 36 34.913970062627364 38.0 34.0 40.0 24.0 41.0 37 34.80132260737516 38.0 34.0 40.0 24.0 41.0 38 34.61509422555097 38.0 33.0 40.0 23.0 41.0 39 34.498975770572606 38.0 33.0 40.0 23.0 41.0 40 34.32756315192381 38.0 33.0 40.0 23.0 41.0 41 34.147361008865985 37.0 33.0 40.0 22.0 41.0 42 34.085053718699655 37.0 33.0 40.0 21.0 41.0 43 33.99253166042527 37.0 33.0 40.0 21.0 41.0 44 33.65087824117047 37.0 33.0 40.0 20.0 41.0 45 33.583632956004365 37.0 33.0 40.0 20.0 41.0 46 33.56650378573689 36.0 32.0 40.0 20.0 41.0 47 33.458102614985755 36.0 32.0 40.0 20.0 41.0 48 33.402740880623924 36.0 32.0 40.0 20.0 41.0 49 33.284223666101205 36.0 32.0 40.0 20.0 41.0 50 33.16304274379683 36.0 32.0 39.0 20.0 40.0 51 33.01078108162895 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 7.0 14 9.0 15 26.0 16 82.0 17 172.0 18 449.0 19 827.0 20 1472.0 21 2339.0 22 3455.0 23 5146.0 24 7115.0 25 9531.0 26 11289.0 27 11981.0 28 12568.0 29 14106.0 30 16953.0 31 20925.0 32 27838.0 33 39568.0 34 49387.0 35 56555.0 36 70552.0 37 101379.0 38 81638.0 39 17001.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.36258788635321 23.68210479147329 24.198131492565444 16.757175829608055 2 34.82486743697255 23.9948859655674 28.892160732893057 12.288085864566996 3 30.869314726498736 23.95416573312422 32.92915390825323 12.247365632123817 4 27.145280542841597 27.20751670596436 30.523281659536178 15.123921091657866 5 20.70401547724468 36.39055148353231 29.17186783172764 13.733565207495369 6 20.48921180566669 40.674888952903224 28.98124735496307 9.854651886467012 7 36.135916667555755 57.9301319051023 5.22997151361905 0.7039799137228961 8 86.42326992357398 3.1950267971136648 8.726754793073649 1.6549484862386954 9 82.17538506403213 4.505542574870105 10.21953361997532 3.0995387411224558 10 44.49369992211589 26.312382862650125 16.317788517961358 12.876128697272634 11 37.38721918154111 24.122025555946756 22.657697546472633 15.833057716039503 12 33.72808842514056 21.56323016355664 28.20756293854268 16.50111847276012 13 24.98550786487284 28.935014776643303 28.46077521364786 17.618702144836 14 19.69490054661133 32.53208718753001 30.44788699335318 17.325125272505485 15 18.311835184414644 23.501442100808358 39.4975585642295 18.689164150547498 16 21.772877124475883 19.09707774541497 38.03803163019627 21.09201349991287 17 21.607328930569338 19.51690512008023 30.218324460234648 28.657441489115786 18 23.49023959144626 22.646317219501615 32.52675265926234 21.336690529789784 19 28.315498227158436 24.784396149181863 26.495534999839965 20.404570623819733 20 29.825169726907717 23.880193607812593 25.72807419973185 20.56656246554784 21 26.017916902275 24.883440557351513 29.211343340908364 19.887299199465126 22 24.24738697023689 21.93842531838243 28.027611518313435 25.786576193067244 23 22.841916589316007 26.653259218953934 27.111317379537457 23.393506812192598 24 23.007642600831474 24.871526777553726 32.70634844427374 19.414482177341057 25 23.75749945765629 23.291795139889114 30.800499311845854 22.15020609060874 26 21.15833946804084 27.263529252774845 28.100694555580453 23.477436723603866 27 21.238001756837978 26.160882259848428 30.006188052790495 22.594927930523102 28 20.56105011967125 25.73963234431179 32.9040816253952 20.795235910621756 29 21.306283718664094 25.42240572999463 32.418461735428735 20.85284881591254 30 22.97616888405225 25.307535554630906 31.885008908662204 19.83128665265464 31 28.608186011444342 23.992218701433565 26.401647302329057 20.99794798479304 32 28.244193365980646 24.846632312304624 27.201648724869926 19.707525596844803 33 27.597826357548534 23.92322546917176 26.074285084303327 22.404663088976378 34 22.373011554588228 26.144700857436508 28.09820510905554 23.384082478919723 35 22.803330168179894 24.807512438341746 29.50492021323888 22.884237180239484 36 28.44245999992887 25.53994316949219 25.518427238812606 20.499169591766332 37 23.22689171263252 29.03583736090218 25.728963287776462 22.008307638688844 38 23.827737413180554 29.622457652736433 24.22693794521084 22.322866988872175 39 23.133004015121607 27.258550359725024 24.482106214014163 25.126339411139202 40 24.59555384850651 24.236184460874792 27.418941842972828 23.74931984764587 41 21.85680703588715 23.625914427053882 28.238503202495135 26.278775334563832 42 23.332871007550136 26.47473033959607 24.801822274856235 25.390576377997558 43 23.289839146190968 25.42151664195002 25.827474243119347 25.461169968739668 44 22.591549395953585 26.68722238225807 28.2077407561516 22.513487465636747 45 22.362164680443975 28.85890884002461 25.981642110054874 22.79728436947654 46 24.169680675137897 27.22885481903502 27.364529654642638 21.236934851184444 47 23.39368462980152 27.239701693179274 26.986845053291937 22.37976862372727 48 23.215689203270422 26.073218178649793 27.843392475470065 22.867700142609724 49 23.149185417533527 25.109091103073755 29.199963013937346 22.541760465455376 50 22.05436239939969 27.109005750621474 27.95630665713564 22.880325192843195 51 21.943759846650092 28.618321615152905 27.111495197146386 22.326423341050617 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 415.0 1 699.0 2 983.0 3 4526.0 4 8069.0 5 5873.0 6 3677.0 7 3654.0 8 3631.0 9 3684.0 10 3737.0 11 3693.5 12 3650.0 13 3482.0 14 3314.0 15 3183.5 16 3053.0 17 2904.0 18 2755.0 19 2612.5 20 2470.0 21 2454.5 22 2439.0 23 2662.5 24 2886.0 25 3243.0 26 4102.0 27 4604.0 28 5348.5 29 6093.0 30 7001.5 31 7910.0 32 8922.5 33 9935.0 34 11227.0 35 12519.0 36 14386.5 37 16254.0 38 19346.5 39 22439.0 40 26520.0 41 30601.0 42 33186.5 43 35772.0 44 37187.5 45 38603.0 46 40141.0 47 41679.0 48 41039.0 49 40399.0 50 39209.5 51 38020.0 52 35650.5 53 33281.0 54 32515.5 55 31750.0 56 31377.5 57 31005.0 58 29513.5 59 28022.0 60 25925.0 61 23828.0 62 21411.5 63 18995.0 64 16620.5 65 14246.0 66 12125.5 67 10005.0 68 8814.5 69 7624.0 70 6639.5 71 5655.0 72 4707.0 73 3759.0 74 3020.5 75 1770.0 76 1258.0 77 933.0 78 608.0 79 447.0 80 286.0 81 209.5 82 133.0 83 104.0 84 75.0 85 54.5 86 34.0 87 22.5 88 11.0 89 8.5 90 6.0 91 4.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 562374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.02098705165003 #Duplication Level Percentage of deduplicated Percentage of total 1 68.58153299148987 28.132821768262158 2 10.179782347088755 8.351694396970869 3 5.363675401058203 6.60069777528187 4 3.510795259204849 5.760651474753457 5 2.468539053818755 5.063095428159579 6 1.9285475756935837 4.746655507861053 7 1.4361099977338858 4.123745473525082 8 1.1587513987741713 3.8026500900157316 9 0.9216876414351929 3.402768312448101 >10 4.398332581686036 26.758660582989087 >50 0.03411086290423315 0.988516091153054 >100 0.016839539890181013 1.4352169642947012 >500 4.3178307410720543E-4 0.10786710246272653 >1k 8.635661482144109E-4 0.724959031822561 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2120 0.37697333091501384 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1973 0.3508341424034539 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 609 0.10829092383360539 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0037341697873657033 0.0 2 0.0 0.0 0.0 0.019737754590361575 0.0 3 0.0 0.0 0.0 0.02773954699185951 0.0 4 0.0 0.0 0.0 0.04374313179485538 0.0 5 0.0 0.0 0.0 0.07468339574731407 0.0 6 0.0 0.0 0.0 0.11131382318528239 0.0 7 0.0 0.0 0.0 0.13851991735037536 0.0 8 0.0 0.0 0.0 0.34496616130902213 0.0 9 0.0 0.0 0.0 0.44827819209280656 0.0 10 0.0 0.0 0.0 0.6420993858179788 0.0 11 0.0 0.0 0.0 0.75821428444416 0.0 12 0.0 0.0 0.0 0.8864207804770491 0.0 13 0.0 0.0 0.0 0.9392326103269355 0.0 14 0.0 0.0 0.0 0.9637714403581958 0.0 15 0.0 0.0 0.0 0.9993349621426311 0.0 16 0.0 0.0 0.0 1.0541027856906613 0.0 17 0.0 0.0 0.0 1.1124269614171352 0.0 18 0.0 0.0 0.0 1.20186921870499 0.0 19 0.0 0.0 0.0 1.2505912435496662 0.0 20 0.0 0.0 0.0 1.299668903612187 0.0 21 0.0 0.0 0.0 1.362260701952793 0.0 22 0.0 0.0 0.0 1.420762695288189 0.0 23 0.0 0.0 0.0 1.4879777514607717 0.0 24 0.0 0.0 0.0 1.5466575624050898 0.0 25 0.0 0.0 0.0 1.5909341470267118 0.0 26 0.0 0.0 0.0 1.6360998196929446 0.0 27 0.0 0.0 0.0 1.69211236650343 0.0 28 0.0 0.0 0.0 1.7429682026551725 0.0 29 0.0 0.0 0.0 1.799869837510269 0.0 30 0.0 0.0 0.0 1.882555025659081 0.0 31 0.0 0.0 0.0 1.9478140881335197 0.0 32 0.0 0.0 0.0 2.0159182323507134 0.0 33 0.0 0.0 0.0 2.0865118230928172 0.0 34 0.0 0.0 0.0 2.15781668427061 0.0 35 0.0 0.0 0.0 2.2401462372015777 0.0 36 0.0 0.0 0.0 2.304160576413561 0.0 37 0.0 0.0 0.0 2.37350944389321 0.0 38 0.0 0.0 0.0 2.4668636885773525 0.0 39 0.0 0.0 0.0 2.606272693972339 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATG 20 7.030212E-4 45.0 1 ACGGGTA 20 7.030212E-4 45.0 5 ACGTAAC 20 7.030212E-4 45.0 16 CGTTTTA 1285 0.0 43.949417 1 TAAGGTA 125 0.0 43.2 5 AGGCGAT 430 0.0 42.906975 7 AATAGGC 95 0.0 42.63158 4 GTAAGGT 150 0.0 42.0 4 GTTTTAT 1520 0.0 41.299343 2 CGTTTTT 1790 0.0 41.10335 1 ATAGGCC 55 6.002665E-11 40.909092 5 CGTTATT 325 0.0 40.846153 1 ATACTAT 255 0.0 40.588234 45 CGCATCG 50 1.0786607E-9 40.5 21 CAACCCG 50 1.0786607E-9 40.5 23 TCGTCCC 190 0.0 40.263157 38 TCACGAC 140 0.0 40.17857 25 CACGACG 140 0.0 40.17857 26 CGGTCTA 135 0.0 40.000004 31 GGCGATT 335 0.0 39.62686 8 >>END_MODULE