##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545781_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 401344 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.957931350661777 31.0 31.0 33.0 30.0 33.0 2 31.136249701004626 31.0 31.0 33.0 30.0 34.0 3 31.068631896826663 31.0 31.0 34.0 28.0 34.0 4 35.055677922181474 35.0 35.0 37.0 32.0 37.0 5 32.78706047679796 35.0 35.0 37.0 28.0 37.0 6 33.9609586788391 35.0 35.0 37.0 28.0 37.0 7 15.078329313506618 0.0 0.0 35.0 0.0 37.0 8 24.78385624302344 17.0 17.0 35.0 17.0 37.0 9 32.63090017541062 32.0 32.0 37.0 27.0 39.0 10 35.38364844123744 37.0 34.0 37.0 32.0 39.0 11 36.374068131079575 37.0 35.0 39.0 32.0 39.0 12 36.320632674214636 37.0 35.0 39.0 32.0 39.0 13 36.08421204752033 37.0 35.0 39.0 32.0 39.0 14 37.066531454313505 39.0 36.0 40.0 31.0 41.0 15 37.37156404480944 39.0 36.0 41.0 32.0 41.0 16 37.38845230027109 39.0 36.0 41.0 32.0 41.0 17 37.325797819327065 39.0 35.0 41.0 32.0 41.0 18 37.25787852814543 39.0 36.0 40.0 32.0 41.0 19 37.20829512836868 39.0 36.0 40.0 32.0 41.0 20 37.32710094083878 39.0 35.0 40.0 32.0 41.0 21 37.194628548078455 39.0 35.0 40.0 32.0 41.0 22 37.251918553659706 39.0 35.0 40.0 32.0 41.0 23 37.2508870196141 39.0 35.0 40.0 32.0 41.0 24 37.067732419071916 39.0 35.0 40.0 32.0 41.0 25 36.811839718545684 38.0 35.0 40.0 31.0 41.0 26 36.69995066576303 38.0 35.0 40.0 31.0 41.0 27 36.61629923457184 38.0 35.0 40.0 31.0 41.0 28 36.528284962525916 38.0 35.0 40.0 31.0 41.0 29 36.47684280816457 38.0 35.0 40.0 31.0 41.0 30 36.17320802104928 38.0 35.0 40.0 30.0 41.0 31 36.03545337665444 38.0 35.0 40.0 30.0 41.0 32 35.93794849306331 38.0 35.0 40.0 29.0 41.0 33 35.75623156195184 38.0 34.0 40.0 29.0 41.0 34 35.542173297719664 38.0 34.0 40.0 27.0 41.0 35 35.360703037793016 38.0 34.0 40.0 26.0 41.0 36 35.17393308483496 38.0 34.0 40.0 25.0 41.0 37 35.06337206984532 38.0 34.0 40.0 25.0 41.0 38 34.90550500318928 38.0 34.0 40.0 24.0 41.0 39 34.776912075426566 38.0 34.0 40.0 24.0 41.0 40 34.63810347233296 38.0 33.0 40.0 23.0 41.0 41 34.45524786716632 37.0 33.0 40.0 23.0 41.0 42 34.42046224685058 37.0 33.0 40.0 23.0 41.0 43 34.31950396667198 37.0 33.0 40.0 23.0 41.0 44 34.092982578536116 37.0 33.0 40.0 23.0 41.0 45 34.01720967549035 37.0 33.0 40.0 23.0 41.0 46 33.96812958459576 37.0 33.0 40.0 23.0 41.0 47 33.87168115133153 37.0 33.0 40.0 23.0 41.0 48 33.80753916839419 36.0 33.0 40.0 22.0 41.0 49 33.6728890926487 36.0 33.0 40.0 22.0 41.0 50 33.55337814941795 36.0 32.0 40.0 22.0 41.0 51 33.387787035560514 36.0 32.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 5.0 14 14.0 15 20.0 16 60.0 17 146.0 18 270.0 19 558.0 20 940.0 21 1485.0 22 2266.0 23 3235.0 24 4648.0 25 6159.0 26 7219.0 27 7887.0 28 8680.0 29 10002.0 30 12136.0 31 15500.0 32 19962.0 33 28713.0 34 35834.0 35 39988.0 36 49725.0 37 72750.0 38 60544.0 39 12597.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.99463801626535 24.55499521607399 27.973010684101418 14.47735608355924 2 34.83520371551587 22.917248046563547 29.66432785839579 12.583220379524796 3 31.679805852336152 23.04407191835433 32.16741747727635 13.108704752033168 4 27.913211608993784 26.75061792377611 29.31724405995854 16.018926407271568 5 21.021866528464358 36.03517182267581 28.362202997926968 14.580758650932864 6 20.060845558922022 42.17628767341732 28.168603492265987 9.594263275394674 7 37.54659344602137 57.325885026311596 4.3431569925051825 0.7843645351618562 8 87.54260684101419 3.1860448891723805 7.445981502152767 1.8253667676606602 9 83.25451483017062 4.519564264072716 8.987800988678043 3.2381199170786155 10 45.751524876415246 25.233465555732735 15.546762876734174 13.468246691117844 11 39.72228312868761 23.098638574390048 21.353253069685856 15.825825227236484 12 35.68136062828895 21.213472731621753 27.62243860628289 15.482728033806412 13 24.55723768139053 31.163291341093924 27.962296683144633 16.317174294370915 14 19.00838183702759 34.50730545367565 30.35849545527029 16.12581725402647 15 17.732419071918354 23.532929357359272 41.17988558443629 17.55476598628608 16 20.711160500717586 18.84567852017222 40.19195503109552 20.251205948014668 17 20.50111624940201 19.124242545048638 29.741070004783925 30.63357120076543 18 23.737741189602936 23.244897145590816 32.32414088662095 20.6932207781853 19 28.921573512996336 24.66936094721735 25.74948174134907 20.65958379843725 20 29.237262797002074 24.34021687131239 24.99850502312231 21.424015308563227 21 25.257385185775792 25.089449449848512 29.74430912135226 19.90885624302344 22 23.677692951682346 22.629963323233934 27.670527029181947 26.021816695901773 23 21.482817732419072 27.92168314463403 26.85975123584755 23.735747887099347 24 21.777826502950088 25.29326463084038 33.54454034444267 19.384368521766863 25 22.941167676606604 23.312669430712806 31.299085074150852 22.44707781852974 26 19.708529341412852 28.196758890129164 27.43880561313985 24.65590615531813 27 20.52603253069686 27.82226718226758 30.389391644075904 21.262308642959653 28 18.884547918992187 26.784254903524157 33.91853372667836 20.412663450805294 29 19.99157829692234 26.158607080210494 32.8042776271727 21.045536995694466 30 22.83901092329772 25.93261640886621 31.659374501674375 19.5689981661617 31 29.090505900175412 24.96686134587785 26.072396746930316 19.870236007016427 32 28.830629086270132 25.05282251634508 26.669640009567853 19.446908387816936 33 27.96653245096476 24.216881278902886 26.00337864774358 21.813207622388774 34 21.621601419231382 26.50793334396428 28.726229867644715 23.144235369159624 35 21.980395869877213 24.849754823792058 29.633182506777228 23.536666799553497 36 28.85454871631319 25.052573353532132 25.64682666241429 20.44605126774039 37 22.164776351459096 29.852694944984854 26.476040503906873 21.50648819964918 38 23.005700845160263 30.471864535161856 23.995375538191677 22.527059081486208 39 21.8585552543454 27.604997209376496 25.84864854090257 24.687798995375537 40 24.287394354967308 23.65053420507096 27.836220299792696 24.225851140169034 41 20.836489395630682 23.697875139531174 27.80806490192952 27.657570562908628 42 22.80562310636262 26.391574310317335 24.723180114814227 26.07962246850582 43 22.15979309520013 25.17840057407112 26.46856561951842 26.193240711210336 44 21.870764232179877 26.691317174294372 28.38637179078297 23.051546802742784 45 21.232159942592887 29.856183224366127 25.37349505660979 23.538161776431192 46 23.720798118322435 27.695941636102695 27.315719183543298 21.267541062031576 47 23.031115452081007 27.593784882793816 26.393069287195026 22.982030377930155 48 22.432875538191677 26.772544251315576 27.998176128209217 22.796404082283527 49 22.266434779142084 25.384458220379525 30.26057446978153 22.08853253069686 50 21.859801068410142 28.40456067612821 28.114784324669113 21.620853930792535 51 21.256328735448893 29.635175809280817 26.636501355445702 22.471994099824588 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 249.0 1 431.5 2 614.0 3 2350.5 4 4087.0 5 3000.0 6 1913.0 7 1931.5 8 1950.0 9 2014.5 10 2079.0 11 2053.5 12 2028.0 13 1940.5 14 1853.0 15 1829.5 16 1806.0 17 1675.5 18 1545.0 19 1578.0 20 1611.0 21 1757.0 22 1903.0 23 1989.5 24 2076.0 25 2303.5 26 2921.5 27 3312.0 28 3814.0 29 4316.0 30 4998.0 31 5680.0 32 6603.5 33 7527.0 34 8524.0 35 9521.0 36 10901.0 37 12281.0 38 15192.0 39 18103.0 40 21957.5 41 25812.0 42 27759.5 43 29707.0 44 30355.0 45 31003.0 46 31768.0 47 32533.0 48 31709.0 49 30885.0 50 29649.5 51 28414.0 52 26159.0 53 23904.0 54 23059.0 55 22214.0 56 21199.0 57 20184.0 58 19206.0 59 18228.0 60 16588.5 61 14949.0 62 13143.5 63 11338.0 64 9864.5 65 8391.0 66 7047.5 67 5704.0 68 4815.0 69 3926.0 70 3439.0 71 2952.0 72 2515.0 73 2078.0 74 1568.5 75 774.5 76 490.0 77 381.5 78 273.0 79 231.5 80 190.0 81 134.0 82 78.0 83 51.5 84 25.0 85 19.0 86 13.0 87 8.0 88 3.0 89 4.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 401344.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.04642115265553 #Duplication Level Percentage of deduplicated Percentage of total 1 67.48612154865542 27.70063767045412 2 10.179928384288855 8.35699255530785 3 5.678373589224162 6.992307414162334 4 3.790499810152734 6.223458063463597 5 2.6930467739295882 5.52699660332571 6 2.0458661067120874 5.038528910282883 7 1.6239111629853438 4.6659019057276545 8 1.291516651043849 4.240970910753045 9 0.9631182670946197 3.557930220988338 >10 4.194943703086222 24.74913799102519 >50 0.03148331203461807 0.9108069711001378 >100 0.019374345867457267 1.3695654072940948 >500 6.054483083580396E-4 0.13618614465562764 >1k 0.0012108966167160792 0.5305792314594253 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1113 0.2773182108116728 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1022 0.2546443948333599 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 548 0.1365412214957742 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004983256258969861 0.0 2 0.0 0.0 0.0 0.02441795566895232 0.0 3 0.0 0.0 0.0 0.03288949130920108 0.0 4 0.0 0.0 0.0 0.05058005102854409 0.0 5 0.0 0.0 0.0 0.09094442672619997 0.0 6 0.0 0.0 0.0 0.14875019933025035 0.0 7 0.0 0.0 0.0 0.18438048158188486 0.0 8 0.0 0.0 0.0 0.4273142242066656 0.0 9 0.0 0.0 0.0 0.5254843725083719 0.0 10 0.0 0.0 0.0 0.6869418752989954 0.0 11 0.0 0.0 0.0 0.8389311911975762 0.0 12 0.0 0.0 0.0 0.9724824589379685 0.0 13 0.0 0.0 0.0 1.0325306968585553 0.0 14 0.0 0.0 0.0 1.054706187210971 0.0 15 0.0 0.0 0.0 1.0863498644554297 0.0 16 0.0 0.0 0.0 1.1606003827140807 0.0 17 0.0 0.0 0.0 1.2438207622388773 0.0 18 0.0 0.0 0.0 1.3751295646627333 0.0 19 0.0 0.0 0.0 1.4416560357199808 0.0 20 0.0 0.0 0.0 1.5012059480146707 0.0 21 0.0 0.0 0.0 1.5839280019135704 0.0 22 0.0 0.0 0.0 1.6758690798915643 0.0 23 0.0 0.0 0.0 1.7715476000637858 0.0 24 0.0 0.0 0.0 1.850033886142561 0.0 25 0.0 0.0 0.0 1.9113279381278903 0.0 26 0.0 0.0 0.0 1.9713761760484771 0.0 27 0.0 0.0 0.0 2.0376534842927763 0.0 28 0.0 0.0 0.0 2.1081665603572 0.0 29 0.0 0.0 0.0 2.201851778025833 0.0 30 0.0 0.0 0.0 2.299772763514591 0.0 31 0.0 0.0 0.0 2.387228910859512 0.0 32 0.0 0.0 0.0 2.4689543135066176 0.0 33 0.0 0.0 0.0 2.5643836708658907 0.0 34 0.0 0.0 0.0 2.665792935735927 0.0 35 0.0 0.0 0.0 2.8018358316058043 0.0 36 0.0 0.0 0.0 2.9015009567852017 0.0 37 0.0 0.0 0.0 3.0029102216552386 0.0 38 0.0 0.0 0.0 3.122508371870515 0.0 39 0.0 0.0 0.0 3.3198453197257214 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 130 0.0 45.000004 25 CACGACG 130 0.0 45.000004 26 GTACCGC 20 7.0277933E-4 45.0 31 GACGTCA 20 7.0277933E-4 45.0 9 CGCATCG 20 7.0277933E-4 45.0 21 ATAGCGG 20 7.0277933E-4 45.0 2 GGATCGT 20 7.0277933E-4 45.0 8 GCGTTAA 20 7.0277933E-4 45.0 1 ATGCGCG 40 6.7957444E-9 45.0 36 ATACGAA 20 7.0277933E-4 45.0 19 TGCGTAG 20 7.0277933E-4 45.0 2 GTTAATC 30 2.161958E-6 44.999996 40 CGAGACA 60 0.0 44.999996 22 CGAAGGA 140 0.0 43.39286 4 CGACGGT 135 0.0 43.333336 28 GACGGTC 135 0.0 43.333336 29 ACGGTCT 135 0.0 43.333336 30 ATAGGCG 120 0.0 43.124996 5 CGTTTTA 660 0.0 42.272728 1 CGTTATT 145 0.0 41.89655 1 >>END_MODULE