##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545777_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 343920 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.081975459409165 31.0 31.0 33.0 30.0 33.0 2 31.233504884856945 31.0 31.0 33.0 30.0 34.0 3 31.146359618515934 31.0 31.0 34.0 28.0 34.0 4 35.11359618515934 35.0 35.0 37.0 33.0 37.0 5 32.90866480576879 35.0 35.0 37.0 28.0 37.0 6 34.08394684810421 35.0 35.0 37.0 29.0 37.0 7 15.022926843451966 0.0 0.0 35.0 0.0 37.0 8 24.782705280297744 17.0 17.0 35.0 17.0 37.0 9 32.75653058850896 32.0 32.0 37.0 27.0 39.0 10 35.62296173528728 37.0 35.0 37.0 32.0 39.0 11 36.58466794603396 37.0 35.0 39.0 33.0 39.0 12 36.36338683414748 37.0 35.0 39.0 32.0 39.0 13 35.949685973482204 37.0 35.0 39.0 31.0 39.0 14 37.00422772737846 39.0 35.0 40.0 31.0 41.0 15 37.40682135380321 39.0 35.0 41.0 32.0 41.0 16 37.47276110723424 39.0 35.0 41.0 33.0 41.0 17 37.43018434519656 39.0 35.0 41.0 32.0 41.0 18 37.3533350779251 39.0 35.0 41.0 32.0 41.0 19 37.27812863456618 39.0 35.0 41.0 32.0 41.0 20 37.35551872528495 39.0 35.0 41.0 32.0 41.0 21 37.197999534775526 39.0 35.0 41.0 32.0 41.0 22 37.23663061177018 39.0 35.0 41.0 32.0 41.0 23 37.230992672714585 39.0 35.0 41.0 32.0 41.0 24 37.07692195859502 39.0 35.0 41.0 32.0 41.0 25 36.80893521749244 38.0 35.0 40.0 32.0 41.0 26 36.68214410327983 38.0 35.0 40.0 31.0 41.0 27 36.570321586415446 38.0 35.0 40.0 31.0 41.0 28 36.488273435682714 38.0 35.0 40.0 31.0 41.0 29 36.49180041870202 38.0 35.0 40.0 31.0 41.0 30 36.25708595022098 38.0 35.0 40.0 30.0 41.0 31 36.108388578739245 38.0 35.0 40.0 30.0 41.0 32 35.95531809723192 38.0 35.0 40.0 30.0 41.0 33 35.77398232147011 38.0 34.0 40.0 29.0 41.0 34 35.59593800883926 38.0 34.0 40.0 29.0 41.0 35 35.38417946033962 38.0 34.0 40.0 27.0 41.0 36 35.17537508722959 38.0 34.0 40.0 26.0 41.0 37 34.99175389625494 38.0 34.0 40.0 25.0 41.0 38 34.9166346824843 38.0 34.0 40.0 25.0 41.0 39 34.785679809257964 38.0 34.0 40.0 24.0 41.0 40 34.58178064666201 37.0 33.0 40.0 23.0 41.0 41 34.46208711328216 37.0 33.0 40.0 23.0 41.0 42 34.373944521981855 37.0 33.0 40.0 23.0 41.0 43 34.261226448011165 37.0 33.0 40.0 23.0 41.0 44 33.983699697604095 37.0 33.0 40.0 22.0 41.0 45 33.83111479413817 36.0 33.0 40.0 22.0 41.0 46 33.77619504535939 36.0 33.0 40.0 21.0 41.0 47 33.752922191207254 36.0 33.0 40.0 21.0 41.0 48 33.70776634100954 36.0 33.0 40.0 21.0 41.0 49 33.621156082809954 36.0 33.0 40.0 20.0 41.0 50 33.442716329378925 36.0 33.0 40.0 20.0 41.0 51 33.26477669225401 35.0 32.0 40.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 10.0 15 11.0 16 31.0 17 67.0 18 209.0 19 379.0 20 731.0 21 1125.0 22 1849.0 23 2595.0 24 3863.0 25 5225.0 26 6278.0 27 6785.0 28 7300.0 29 8405.0 30 10031.0 31 13059.0 32 17311.0 33 26514.0 34 33960.0 35 35060.0 36 39006.0 37 60235.0 38 54037.0 39 9844.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.95190742033031 24.021574784833682 28.09868574086997 15.927832053966037 2 32.828855547801815 24.871481739939522 30.47540125610607 11.824261456152593 3 30.07676203768318 23.757850662944872 33.28739241684113 12.877994882530821 4 26.97575017445918 26.636717841358454 31.641660851360783 14.745871132821586 5 20.828390323331007 36.695161665503605 29.213479879041635 13.262968132123751 6 20.849034659223076 40.60740869969761 28.537450569899974 10.006106071179344 7 37.174342870434984 57.723889276575946 4.4062572691323565 0.6955105838567108 8 88.18998604326588 2.925389625494301 7.476157245871133 1.4084670853686905 9 84.10415212840195 4.378634566178181 8.978250755989766 2.5389625494301002 10 53.24406838799721 21.694870900209352 14.000348918353106 11.060711793440335 11 48.48336822516865 19.271051407304025 19.46179344033496 12.78378692719237 12 42.459002093510115 21.30786229355664 23.210921144452197 13.022214468481042 13 21.28169341707374 40.64549895324494 23.999767387764596 14.073040241916726 14 15.861246801581764 42.4482437776227 27.81111886485229 13.879390555943244 15 14.91044428936962 21.86991160735055 48.528146080483836 14.691498022795999 16 16.172947197022562 16.575075598976508 47.71807397069086 19.53390323331007 17 16.265410560595488 16.811467783205398 29.774656896952777 37.14846475924634 18 21.55384973249593 22.382821586415446 35.63328681088625 20.430041870202373 19 29.730460572226097 23.269946499185856 26.161025819958127 20.838567108629913 20 31.603570597813444 22.386892300535006 25.291346824842986 20.71819027680856 21 22.811409630146546 27.583158874156783 28.643870667597117 20.961560828099557 22 22.85793207722726 23.08269364968597 25.71237497092347 28.346999302163294 23 19.885729239357993 29.3216445685043 25.717317980925795 25.07530821121191 24 20.236101418934634 23.000407071411956 39.63770644335892 17.125785066294487 25 18.654047452896023 23.146371249127704 37.06210746685276 21.13747383112352 26 16.90654803442661 33.06117701791114 27.581414282391254 22.450860665270994 27 17.900383810188416 32.740462898348454 29.893579902302864 19.46557338916027 28 15.903117003954408 27.49273086764364 39.74209118399628 16.862060944405677 29 16.747208653175157 24.311467783205394 38.13444987206327 20.806873691556177 30 19.613282158641546 28.413293789253313 32.78087927424983 19.192544777855318 31 30.88305419865085 24.666492207490116 25.27012095836241 19.180332635496626 32 30.66759711560828 24.726971388695045 27.79105605954873 16.81437543614794 33 29.51238660153524 25.298325191905096 25.333507792509884 19.85578041404978 34 19.856652709932543 26.773086764363807 28.781984182367992 24.58827634333566 35 20.696382879739474 23.64009071877181 32.680274482437774 22.983251919050943 36 31.35002326122354 24.195161665503605 25.505350081414278 18.949464991858573 37 21.158699697604096 32.04902302861131 28.02454059083508 18.767736682949522 38 21.98883461270063 32.439230053500815 22.95533845080251 22.616596882996046 39 21.83705512909979 30.170969993021636 26.251744591765526 21.74023028611305 40 23.845661781809724 25.270993254245173 25.3864270760642 25.496917887880905 41 17.94923237962317 23.28913700860665 27.431379390555943 31.330251221214233 42 21.93824145150035 25.183472900674573 24.041637590137242 28.836648057687835 43 22.520353570597816 25.219237031867873 25.40910676901605 26.85130262851826 44 19.862758781111886 28.89421958595022 28.758722958827633 22.48429867411026 45 18.719760409397534 35.73679925564085 23.463305419865087 22.080134915096533 46 22.554373110025587 30.906606187485465 26.515177948360087 20.023842754128868 47 22.97452896022331 27.08246103745057 26.53960223307746 23.403407769248663 48 22.464235868806696 24.57984414980228 30.51756222377297 22.438357757618054 49 22.01616655036055 23.9480111653873 31.505001163061173 22.530821121190975 50 20.137822749476623 31.49627820423354 27.087404047452896 21.27849499883694 51 18.95906024656897 32.70498953244941 24.90899046289835 23.426959758083274 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 259.0 1 390.0 2 521.0 3 2054.5 4 3588.0 5 2740.0 6 1892.0 7 1936.0 8 1980.0 9 2080.5 10 2181.0 11 2123.5 12 2066.0 13 2010.5 14 1955.0 15 1858.0 16 1761.0 17 1599.0 18 1437.0 19 1356.5 20 1276.0 21 1349.0 22 1422.0 23 1499.5 24 1577.0 25 1801.5 26 2425.5 27 2825.0 28 3310.5 29 3796.0 30 4290.5 31 4785.0 32 5576.0 33 6367.0 34 7061.5 35 7756.0 36 8778.5 37 9801.0 38 12919.0 39 16037.0 40 21611.0 41 27185.0 42 30248.5 43 33312.0 44 32020.5 45 30729.0 46 30274.5 47 29820.0 48 28559.0 49 27298.0 50 25918.5 51 24539.0 52 22283.5 53 20028.0 54 18090.5 55 16153.0 56 15237.0 57 14321.0 58 13476.5 59 12632.0 60 10972.0 61 9312.0 62 8138.5 63 6965.0 64 6002.0 65 5039.0 66 4258.0 67 3477.0 68 3025.0 69 2573.0 70 2375.5 71 2178.0 72 1847.0 73 1516.0 74 1111.0 75 544.0 76 382.0 77 305.0 78 228.0 79 175.5 80 123.0 81 93.5 82 64.0 83 39.0 84 14.0 85 13.5 86 13.0 87 7.5 88 2.0 89 1.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 343920.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.16366848444319 #Duplication Level Percentage of deduplicated Percentage of total 1 66.38083669493122 20.02289551785867 2 8.282619013535635 4.996683482144696 3 4.61377127059438 4.175048012077713 4 3.2061925652568197 3.8684211854277275 5 2.4064144376113825 3.629314366614377 6 1.9032590850765352 3.444556564935196 7 1.548941789450184 3.2705236647072886 8 1.4142059607849295 3.4126111815872067 9 1.1507262939683853 3.1239113802834866 >10 8.985245867455225 46.92700565692342 >50 0.0908205457547321 1.775243788621791 >100 0.01397239165457417 0.5924503605236028 >500 0.002994083925980179 0.7613348382948126 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 954 0.2773900907187718 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 800 0.23261223540358222 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 775 0.22534310304722027 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007559897650616422 0.0 2 0.0 0.0 0.0 0.035182600604791815 0.0 3 0.0 0.0 0.0 0.051756222377297045 0.0 4 0.0 0.0 0.0 0.07472668062340079 0.0 5 0.0 0.0 0.0 0.1218306582926262 0.0 6 0.0 0.0 0.0 0.1753314724354501 0.0 7 0.0 0.0 0.0 0.20469876715515237 0.0 8 0.0 0.0 0.0 0.458246103745057 0.0 9 0.0 0.0 0.0 0.5800767620376832 0.0 10 0.0 0.0 0.0 0.7818678762502907 0.0 11 0.0 0.0 0.0 0.9513840428006514 0.0 12 0.0 0.0 0.0 1.11363107699465 0.0 13 0.0 0.0 0.0 1.1752733193765992 0.0 14 0.0 0.0 0.0 1.1996976040939753 0.0 15 0.0 0.0 0.0 1.2372063270528029 0.0 16 0.0 0.0 0.0 1.3200744359153291 0.0 17 0.0 0.0 0.0 1.4145731565480344 0.0 18 0.0 0.0 0.0 1.5776924866247966 0.0 19 0.0 0.0 0.0 1.6343917190044197 0.0 20 0.0 0.0 0.0 1.700395440800186 0.0 21 0.0 0.0 0.0 1.780646662014422 0.0 22 0.0 0.0 0.0 1.8667131891137474 0.0 23 0.0 0.0 0.0 1.9684810421028147 0.0 24 0.0 0.0 0.0 2.033030937427309 0.0 25 0.0 0.0 0.0 2.094091649220749 0.0 26 0.0 0.0 0.0 2.1388695045359385 0.0 27 0.0 0.0 0.0 2.197604093975343 0.0 28 0.0 0.0 0.0 2.2676785298906723 0.0 29 0.0 0.0 0.0 2.328448476389858 0.0 30 0.0 0.0 0.0 2.4098627587811117 0.0 31 0.0 0.0 0.0 2.49738311235171 0.0 32 0.0 0.0 0.0 2.564549895324494 0.0 33 0.0 0.0 0.0 2.6401488718306583 0.0 34 0.0 0.0 0.0 2.7241800418702025 0.0 35 0.0 0.0 0.0 2.8253663642707605 0.0 36 0.0 0.0 0.0 2.9067806466620145 0.0 37 0.0 0.0 0.0 2.9992440102349383 0.0 38 0.0 0.0 0.0 3.0803675273319375 0.0 39 0.0 0.0 0.0 3.173121656199116 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCG 20 7.026384E-4 45.000004 35 AGGTAGT 20 7.026384E-4 45.000004 7 AGGTAAT 30 2.1610485E-6 45.000004 7 CGACGCT 20 7.026384E-4 45.000004 12 CCTAGGA 20 7.026384E-4 45.000004 4 CCCTAGA 30 2.1610485E-6 45.000004 37 CGACCGT 20 7.026384E-4 45.000004 26 CGATTGT 20 7.026384E-4 45.000004 10 CGCGAGG 30 2.1610485E-6 45.000004 3 GCGTTAT 20 7.026384E-4 45.000004 44 AGACGAG 20 7.026384E-4 45.000004 2 ATATCGA 20 7.026384E-4 45.000004 10 TTAACGT 20 7.026384E-4 45.000004 15 GTGAGTC 20 7.026384E-4 45.000004 18 ATACGCA 20 7.026384E-4 45.000004 25 CGACTAG 20 7.026384E-4 45.000004 2 TAGTGCA 30 2.1610485E-6 45.000004 1 GCGTATA 20 7.026384E-4 45.000004 1 AATACGC 20 7.026384E-4 45.000004 24 TCAACGT 20 7.026384E-4 45.000004 33 >>END_MODULE