SRR1545775_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545775_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	411399
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	855	0.20782743759707728	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	850	0.20661207246493066	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	812	0.1973752974606161	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGCGG	25	3.886423E-5	45.000004	2
TATCTAG	25	3.886423E-5	45.000004	2
AAGGCCG	35	1.2093915E-7	45.000004	6
ACGACTA	25	3.886423E-5	45.000004	39
TCGTTCA	20	7.027999E-4	45.0	16
AACCCGA	20	7.027999E-4	45.0	24
TACGGGA	40	6.7975634E-9	45.0	4
GCCGACC	20	7.027999E-4	45.0	14
CCTCATA	20	7.027999E-4	45.0	15
ACCAGTC	20	7.027999E-4	45.0	10
GCGATAC	20	7.027999E-4	45.0	9
ACAGACG	20	7.027999E-4	45.0	1
CGGTCTA	85	0.0	45.0	31
GGCGATA	185	0.0	45.0	8
AACTAAT	20	7.027999E-4	45.0	39
TTCGAAT	20	7.027999E-4	45.0	16
ACGGTCT	85	0.0	45.0	30
CGTAAAG	30	2.1620908E-6	44.999996	2
AGGCGAT	335	0.0	44.328358	7
CGTTTTA	635	0.0	43.937008	1