##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545775_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 411399 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95928769880335 31.0 31.0 33.0 30.0 33.0 2 31.117518516087788 31.0 31.0 33.0 30.0 34.0 3 31.07393552244901 31.0 31.0 34.0 28.0 34.0 4 35.06628358357701 35.0 35.0 37.0 32.0 37.0 5 32.75171548788403 35.0 35.0 37.0 28.0 37.0 6 33.940223481340496 35.0 35.0 37.0 28.0 37.0 7 15.328036772087438 0.0 0.0 35.0 0.0 37.0 8 24.90145819508555 17.0 17.0 35.0 17.0 37.0 9 32.619364655723516 32.0 32.0 37.0 27.0 39.0 10 35.40593681559751 37.0 34.0 37.0 32.0 39.0 11 36.391447232492055 37.0 35.0 39.0 32.0 39.0 12 36.27039686533025 37.0 35.0 39.0 32.0 39.0 13 35.98529165117076 37.0 35.0 39.0 31.0 39.0 14 37.035649090056125 39.0 35.0 40.0 31.0 41.0 15 37.32666097875785 39.0 36.0 40.0 32.0 41.0 16 37.35107523353241 39.0 35.0 41.0 32.0 41.0 17 37.266480958874475 39.0 35.0 41.0 32.0 41.0 18 37.23571277518905 39.0 36.0 40.0 32.0 41.0 19 37.18880697327898 39.0 35.0 40.0 32.0 41.0 20 37.30507852474119 39.0 35.0 40.0 32.0 41.0 21 37.153281850466335 39.0 35.0 40.0 32.0 41.0 22 37.213466731810236 39.0 35.0 40.0 32.0 41.0 23 37.215061290863616 39.0 35.0 40.0 32.0 41.0 24 37.03435108009499 39.0 35.0 40.0 32.0 41.0 25 36.80974917294403 38.0 35.0 40.0 31.0 41.0 26 36.66723059608798 38.0 35.0 40.0 31.0 41.0 27 36.582536661489215 38.0 35.0 40.0 31.0 41.0 28 36.46403126891412 38.0 35.0 40.0 31.0 41.0 29 36.46047511053746 38.0 35.0 40.0 31.0 41.0 30 36.17087061465876 38.0 35.0 40.0 30.0 41.0 31 36.05798020899419 38.0 35.0 40.0 30.0 41.0 32 35.97547879309381 38.0 35.0 40.0 30.0 41.0 33 35.788764678572385 38.0 34.0 40.0 29.0 41.0 34 35.62324896268586 38.0 34.0 40.0 28.0 41.0 35 35.47512755257062 38.0 34.0 40.0 27.0 41.0 36 35.28201332526331 38.0 34.0 40.0 26.0 41.0 37 35.16934168532252 38.0 34.0 40.0 26.0 41.0 38 35.05865109054713 38.0 34.0 40.0 26.0 41.0 39 34.96285601083133 38.0 34.0 40.0 25.0 41.0 40 34.79440640351581 38.0 34.0 40.0 24.0 41.0 41 34.66404633944176 37.0 33.0 40.0 24.0 41.0 42 34.60638212538193 37.0 33.0 40.0 24.0 41.0 43 34.51609264971476 37.0 33.0 40.0 23.0 41.0 44 34.29821657320509 37.0 33.0 40.0 23.0 41.0 45 34.20915947778191 37.0 33.0 40.0 23.0 41.0 46 34.18073937953179 37.0 33.0 40.0 23.0 41.0 47 34.104742597818664 37.0 33.0 40.0 23.0 41.0 48 34.074516466982175 36.0 33.0 40.0 23.0 41.0 49 33.94512140282305 36.0 33.0 40.0 23.0 41.0 50 33.815407912999305 36.0 33.0 40.0 23.0 41.0 51 33.62414833288365 36.0 32.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 1.0 14 10.0 15 20.0 16 52.0 17 105.0 18 235.0 19 525.0 20 870.0 21 1432.0 22 2102.0 23 3105.0 24 4348.0 25 5698.0 26 6941.0 27 7738.0 28 8713.0 29 10167.0 30 12580.0 31 16122.0 32 21055.0 33 30397.0 34 38347.0 35 41266.0 36 49139.0 37 73472.0 38 63670.0 39 13286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.3598307239444 23.475020600438988 27.94513355647437 14.220015119142243 2 33.08272504308469 23.993495365812752 30.18456534896779 12.739214242134764 3 31.743392667459087 23.462866949117522 31.684082849010327 13.109657534413063 4 28.647371529828707 26.956798631012713 29.09681355569654 15.299016283462041 5 21.641763835108982 37.1461768259038 27.38023184305261 13.831827495934604 6 20.075887398851236 42.32120155858424 27.683586980036413 9.919324062528105 7 38.39143994030126 56.75293328374643 3.9088573380100584 0.9467694379422411 8 87.22432480390083 3.6485261267042457 7.070508192776356 2.056640876618563 9 82.55221816290268 5.290727493260801 8.724620137627948 3.4324342062085713 10 47.705269093993905 25.047460008410326 14.444614595562946 12.802656302032819 11 43.29689668667157 21.934909904982757 20.284687128554033 14.483506279791639 12 39.44929375132171 20.696452835325317 24.698893288510668 15.155360124842307 13 24.21153187051986 33.73075773154529 25.065690485392526 16.992019912542325 14 18.119392609121558 37.30830653453217 27.817763290625404 16.75453756572087 15 17.12157783562916 23.521204475460564 42.4070063369138 16.95021135199648 16 19.545258982156007 18.574911460650124 41.9495429011738 19.93028665602007 17 18.13640772097161 18.904275411461864 29.950729097542773 33.00858777002375 18 22.588290200024794 23.536031930072753 32.65127042117263 21.22440744872982 19 29.62987270265606 25.38047005461851 24.452417239711327 20.537240003014105 20 31.722245314159732 22.93005087518443 24.17507091655546 21.172632894100374 21 24.776190510915193 27.407212948986263 27.148340175839024 20.668256364259516 22 23.32334303194709 23.451928662928204 25.889221898935098 27.335506406189612 23 22.30924236568392 29.26672160117064 24.581245943718873 23.842790089426565 24 21.928590006295593 24.21760869618059 35.2458319052793 18.60796939224451 25 21.694510681844147 22.823098743555526 32.239990860454206 23.24239971414612 26 18.93077037134266 31.177032515878743 26.855194105965257 23.037003006813336 27 20.308994431196965 29.998371410722925 27.787136089295306 21.905498068784805 28 18.842777935775246 27.824569335365425 34.51369594967416 18.81895677918517 29 20.22634960221099 25.194033043347215 33.607033561092756 20.972583793349038 30 21.763543421350075 27.09826713239459 31.063274339509817 20.074915106745518 31 29.881696358036848 24.3568895403246 24.898213170182718 20.86320093145584 32 30.37270387142409 25.24313379468594 25.740704279786776 18.643458054103192 33 28.74022542592471 25.09242851829975 24.9701627860058 21.197183269769738 34 21.372925067878143 26.76695859737141 27.95193960121439 23.908176733536056 35 22.08269830505179 24.212747235652007 30.23561068451795 23.468943774778257 36 28.926905510222433 26.100938504955046 24.862481435297607 20.109674549524915 37 22.257467811054475 31.315097994890607 26.285917078067765 20.141517115987156 38 22.301464028838183 31.870519860281625 22.829904788295547 22.998111322584645 39 22.697673061917992 29.04795587738424 25.22441717165088 23.029953889046887 40 24.331853018602377 24.895053220839138 26.633268432835276 24.13982532772321 41 19.818229990836148 24.22222708368275 27.42009581938702 28.539447106094084 42 22.62207735069847 26.026801231894098 23.632531921565196 27.718589495842238 43 22.46991363615371 25.680908315285162 24.710560793779273 27.138617254781856 44 21.728540905544254 27.42422806083632 28.00614488610813 22.841086147511298 45 20.62231556226437 32.13765711632745 24.208128848149848 23.031898473258323 46 22.57200430725403 30.103135885113964 26.19282010894533 21.13203969868668 47 22.86587959620709 27.1986562923099 25.703514106743086 24.231950004739925 48 22.37292749860841 25.134237078845594 29.51708681839285 22.975748604153146 49 22.14711265705556 24.558154006208085 30.315095564160337 22.979637772576016 50 20.473068724036764 29.454130904547654 27.170702894270526 22.90209747714506 51 19.87194912967703 30.54820259650607 25.69063123634233 23.88921703747457 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 233.0 1 440.0 2 647.0 3 2178.0 4 3709.0 5 2767.0 6 1825.0 7 1851.0 8 1877.0 9 1887.0 10 1897.0 11 1850.0 12 1803.0 13 1762.0 14 1721.0 15 1660.0 16 1599.0 17 1473.5 18 1348.0 19 1335.5 20 1323.0 21 1444.5 22 1566.0 23 1655.5 24 1745.0 25 2079.0 26 2809.5 27 3206.0 28 4088.0 29 4970.0 30 5723.0 31 6476.0 32 7318.5 33 8161.0 34 8657.5 35 9154.0 36 10225.5 37 11297.0 38 15030.5 39 18764.0 40 23667.5 41 28571.0 42 30419.5 43 32268.0 44 32734.5 45 33201.0 46 33184.0 47 33167.0 48 31652.5 49 30138.0 50 29107.5 51 28077.0 52 26412.5 53 24748.0 54 24152.0 55 23556.0 56 22595.5 57 21635.0 58 20896.0 59 20157.0 60 17797.5 61 15438.0 62 13229.0 63 11020.0 64 9421.5 65 7823.0 66 6597.5 67 5372.0 68 4626.5 69 3881.0 70 3368.0 71 2855.0 72 2302.5 73 1750.0 74 1377.0 75 763.5 76 523.0 77 381.5 78 240.0 79 178.0 80 116.0 81 92.5 82 69.0 83 49.0 84 29.0 85 19.5 86 10.0 87 9.5 88 9.0 89 7.5 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 411399.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.70415154565209 #Duplication Level Percentage of deduplicated Percentage of total 1 68.01652759767508 24.96488936554094 2 8.9831582588317 6.594384041814699 3 4.942680977589664 5.442507349297886 4 3.3284784473713738 4.886759093950228 5 2.476779662479645 4.545404803842096 6 1.9696172248959285 4.337587746570413 7 1.6536908941017125 4.248812483074191 8 1.3826375445712868 4.0598830374922255 9 1.0652721276217672 3.518991864862972 >10 6.122146685552462 34.75112187623038 >50 0.03540634758563918 0.8266645221351262 >100 0.021637212413446166 1.217254484122116 >500 0.001967019310313288 0.6057393310666994 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 855 0.20782743759707728 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 850 0.20661207246493066 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 812 0.1973752974606161 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009722921057173206 0.0 2 0.0 0.0 0.0 0.038162465149404835 0.0 3 0.0 0.0 0.0 0.05031611647087134 0.0 4 0.0 0.0 0.0 0.07802644148381498 0.0 5 0.0 0.0 0.0 0.1378224059854302 0.0 6 0.0 0.0 0.0 0.20661207246493063 0.0 7 0.0 0.0 0.0 0.2622757955172472 0.0 8 0.0 0.0 0.0 0.6485188345134528 0.0 9 0.0 0.0 0.0 0.8356850648640372 0.0 10 0.0 0.0 0.0 1.0952870570905617 0.0 11 0.0 0.0 0.0 1.2878008940225911 0.0 12 0.0 0.0 0.0 1.4586812316024103 0.0 13 0.0 0.0 0.0 1.5354923079540785 0.0 14 0.0 0.0 0.0 1.5595565375705824 0.0 15 0.0 0.0 0.0 1.5935867612706887 0.0 16 0.0 0.0 0.0 1.6742870060452262 0.0 17 0.0 0.0 0.0 1.7836698679384246 0.0 18 0.0 0.0 0.0 1.9584393739411132 0.0 19 0.0 0.0 0.0 2.0260136752884668 0.0 20 0.0 0.0 0.0 2.0943171957151088 0.0 21 0.0 0.0 0.0 2.1837680694411024 0.0 22 0.0 0.0 0.0 2.2744343082992424 0.0 23 0.0 0.0 0.0 2.389650922826745 0.0 24 0.0 0.0 0.0 2.4732680439184342 0.0 25 0.0 0.0 0.0 2.5393839071072124 0.0 26 0.0 0.0 0.0 2.6064720624017075 0.0 27 0.0 0.0 0.0 2.6638372966390294 0.0 28 0.0 0.0 0.0 2.738703788779263 0.0 29 0.0 0.0 0.0 2.8164871572366486 0.0 30 0.0 0.0 0.0 2.92125163162769 0.0 31 0.0 0.0 0.0 3.016293184961558 0.0 32 0.0 0.0 0.0 3.10987630013685 0.0 33 0.0 0.0 0.0 3.2022440501799956 0.0 34 0.0 0.0 0.0 3.2897503396945544 0.0 35 0.0 0.0 0.0 3.4015639318520465 0.0 36 0.0 0.0 0.0 3.4958762661066265 0.0 37 0.0 0.0 0.0 3.6001545944448092 0.0 38 0.0 0.0 0.0 3.7088082372587197 0.0 39 0.0 0.0 0.0 3.8303447504733845 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGG 25 3.886423E-5 45.000004 2 TATCTAG 25 3.886423E-5 45.000004 2 AAGGCCG 35 1.2093915E-7 45.000004 6 ACGACTA 25 3.886423E-5 45.000004 39 TCGTTCA 20 7.027999E-4 45.0 16 AACCCGA 20 7.027999E-4 45.0 24 TACGGGA 40 6.7975634E-9 45.0 4 GCCGACC 20 7.027999E-4 45.0 14 CCTCATA 20 7.027999E-4 45.0 15 ACCAGTC 20 7.027999E-4 45.0 10 GCGATAC 20 7.027999E-4 45.0 9 ACAGACG 20 7.027999E-4 45.0 1 CGGTCTA 85 0.0 45.0 31 GGCGATA 185 0.0 45.0 8 AACTAAT 20 7.027999E-4 45.0 39 TTCGAAT 20 7.027999E-4 45.0 16 ACGGTCT 85 0.0 45.0 30 CGTAAAG 30 2.1620908E-6 44.999996 2 AGGCGAT 335 0.0 44.328358 7 CGTTTTA 635 0.0 43.937008 1 >>END_MODULE