##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545774_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 761799 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49276121391601 31.0 31.0 33.0 30.0 34.0 2 31.68925661493386 31.0 31.0 34.0 30.0 34.0 3 31.747744483781155 31.0 31.0 34.0 30.0 34.0 4 35.64860941009374 37.0 35.0 37.0 33.0 37.0 5 27.23253902932401 35.0 26.0 37.0 0.0 37.0 6 31.403073514142182 35.0 28.0 37.0 17.0 37.0 7 14.84641880601051 0.0 0.0 32.0 0.0 37.0 8 25.01284984621928 17.0 17.0 35.0 17.0 37.0 9 33.159745549679116 32.0 32.0 37.0 28.0 39.0 10 35.98694274999048 37.0 35.0 39.0 32.0 39.0 11 36.95605796279596 38.0 37.0 39.0 34.0 39.0 12 37.012687073624406 39.0 35.0 39.0 33.0 39.0 13 36.599164609037295 39.0 35.0 39.0 33.0 39.0 14 37.91783265664565 40.0 36.0 41.0 33.0 41.0 15 38.1929301561173 40.0 37.0 41.0 33.0 41.0 16 38.24579711971268 40.0 37.0 41.0 34.0 41.0 17 38.24221612262552 40.0 36.0 41.0 34.0 41.0 18 38.221377292435406 40.0 36.0 41.0 34.0 41.0 19 38.17403672097233 40.0 36.0 41.0 34.0 41.0 20 38.2191522960781 40.0 36.0 41.0 34.0 41.0 21 38.09490036085634 40.0 36.0 41.0 34.0 41.0 22 38.004684962831405 40.0 36.0 41.0 34.0 41.0 23 37.89531621858259 40.0 36.0 41.0 34.0 41.0 24 37.75543942693545 40.0 35.0 41.0 33.0 41.0 25 37.57622679998267 39.0 35.0 41.0 33.0 41.0 26 37.333324144557814 39.0 35.0 40.0 33.0 41.0 27 37.12296550664939 39.0 35.0 40.0 33.0 41.0 28 37.15473110361132 39.0 35.0 40.0 32.0 41.0 29 37.078931581690185 39.0 35.0 40.0 32.0 41.0 30 36.88900746784913 39.0 35.0 40.0 32.0 41.0 31 36.718872038424834 38.0 35.0 40.0 31.0 41.0 32 36.50480769861866 38.0 35.0 40.0 31.0 41.0 33 36.29353805925185 38.0 35.0 40.0 31.0 41.0 34 36.05064196723808 38.0 35.0 40.0 30.0 41.0 35 35.866052593925694 38.0 35.0 40.0 30.0 41.0 36 35.69802270677698 38.0 35.0 40.0 29.0 41.0 37 35.57777576499838 38.0 35.0 40.0 29.0 41.0 38 35.41188686254511 38.0 34.0 40.0 28.0 41.0 39 35.340728984942224 38.0 34.0 40.0 28.0 41.0 40 35.12997522968657 38.0 34.0 40.0 27.0 41.0 41 34.957389022563696 38.0 34.0 40.0 27.0 41.0 42 34.98191123905387 38.0 34.0 40.0 27.0 41.0 43 34.85398904435422 37.0 34.0 40.0 26.0 41.0 44 34.62195671036586 37.0 34.0 40.0 26.0 40.0 45 34.407656087760685 37.0 33.0 40.0 25.0 40.0 46 34.25874147905156 36.0 33.0 39.0 24.0 40.0 47 34.07877799787083 36.0 33.0 39.0 24.0 40.0 48 34.08188774204219 36.0 33.0 39.0 24.0 40.0 49 33.94073502328042 36.0 33.0 39.0 24.0 40.0 50 34.107540177920946 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 3.0 15 16.0 16 38.0 17 136.0 18 257.0 19 526.0 20 1038.0 21 1655.0 22 2672.0 23 4083.0 24 6256.0 25 8925.0 26 11219.0 27 12511.0 28 13050.0 29 14855.0 30 18275.0 31 24212.0 32 33510.0 33 59142.0 34 62988.0 35 79417.0 36 107798.0 37 194708.0 38 83017.0 39 21491.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.44924186038575 23.762436023150464 28.571972396918348 15.216349719545445 2 34.44412502510505 23.67291109597151 29.121067368164045 12.7618965107594 3 30.80563245685542 23.652433253390985 32.35394113145331 13.187993158300287 4 27.45172939318639 26.29473128738683 31.28764936682773 14.965889952599046 5 17.7456258146834 47.74395870826819 22.760203150699855 11.750212326348551 6 20.682621006328443 40.5205310062103 28.38570279036859 10.41114519709267 7 39.13066307516812 56.147225186696225 3.740750512930576 0.9813612252050737 8 88.21959598266734 2.7524320719769912 7.336449640915779 1.6915223044398848 9 83.95088468217995 4.1982202654505985 9.034272819995826 2.816622232373631 10 48.33072765913318 25.18617115538351 14.508551468300693 11.974549717182617 11 39.854476049456615 22.296826328204684 21.276609709385284 16.572087912953418 12 35.55898603174853 20.830954096815564 27.393577570986572 16.216482300449332 13 21.69758689628104 33.04861256053106 29.774914380302413 15.478886162885486 14 16.35575788364122 34.39844368396388 32.032859061248445 17.212939371146458 15 15.388573626376512 21.998716196792067 45.222689974652106 17.390020202179315 16 19.72121255081721 16.869016630371004 43.35789361760779 20.05187720120399 17 19.894486603421637 18.81257392041733 30.359976844285697 30.932962631875338 18 22.037965395071403 22.642061751196838 34.380459937595084 20.93951291613667 19 26.953697760170332 23.4128687488432 29.448712849452413 20.184720641534053 20 28.760211026793158 21.980469913979935 26.73894294951818 22.520376109708728 21 23.204808617496216 24.795123123028514 30.101772252260766 21.8982960072145 22 25.05359025149679 22.21360227566589 28.242751696969936 24.490055775867386 23 22.06986357293722 28.699433840159937 25.523924289740467 23.706778297162376 24 20.468128732119627 24.807462335865495 34.49098778024124 20.23342115177363 25 20.17238142869707 25.37191568904659 31.47890716580095 22.97679571645539 26 20.15190358611655 30.31232647981948 27.613845646948864 21.921924287115104 27 19.977841924182098 29.84711190222093 29.165961099975192 21.009085073621783 28 18.430058322470888 26.653224800767656 34.35302487926605 20.563691997495404 29 18.411286966772074 23.852879827881107 35.86077167336791 21.875061531978908 30 20.637070933408943 25.09441466843616 33.252209572341265 21.016304825813634 31 27.550180559438907 25.59375898366892 25.340673852289118 21.51538660460305 32 29.536006216862976 25.83279841533003 25.84264353195528 18.788551835851713 33 29.210986100008007 24.542169259870388 25.626444770864754 20.62039986925685 34 22.432557669411484 26.935188940914863 28.230937557019637 22.40131583265402 35 21.17343288715265 26.948447031303534 29.804187193734833 22.07393288780899 36 29.7495796135201 25.92271714717399 24.531667802136784 19.79603543716912 37 22.33515664893233 30.953703010899204 26.09585993155675 20.61528040861172 38 22.158075817899473 32.55530658349512 23.705596883167345 21.58102071543806 39 20.764794913093873 31.0228813637193 25.00121423105045 23.211109492136377 40 22.80010869008754 25.95185869238474 25.817046228729623 25.430986388798093 41 19.108583760283224 24.058314594794687 26.687354538401863 30.145747106520226 42 21.448308543329674 27.61975271692402 23.29000169336006 27.64193704638625 43 21.82701736284768 27.18013544255112 26.535871010594658 24.456976184006542 44 23.14783820929143 27.6255285186775 27.433614378595927 21.793018893435146 45 22.48375227586279 30.837793171164574 24.073279172065075 22.605175380907564 46 23.85708041097455 27.167796229714135 27.668584495385268 21.30653886392605 47 23.86285621272803 25.880186243352902 27.626709932672526 22.63024761124654 48 23.481390760554948 23.791446300139537 28.48271000618273 24.24445293312278 49 20.926386093969672 23.870863574249903 30.88688748606916 24.31586284571127 50 20.644028149157457 27.819674218527457 27.838970647112955 23.69732698520213 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 346.0 1 700.5 2 1055.0 3 4417.5 4 7780.0 5 5803.0 6 3826.0 7 3927.5 8 4029.0 9 4148.5 10 4268.0 11 4326.5 12 4385.0 13 4166.0 14 3947.0 15 3812.5 16 3678.0 17 3602.5 18 3527.0 19 3520.5 20 3514.0 21 3415.5 22 3317.0 23 3526.5 24 3736.0 25 4326.5 26 4917.0 27 5686.0 28 6455.0 29 7621.5 30 8788.0 31 10624.5 32 12461.0 33 14648.0 34 16835.0 35 17761.5 36 18688.0 37 21211.5 38 23735.0 39 31385.0 40 39035.0 41 48468.5 42 57902.0 43 61379.0 44 64856.0 45 67535.0 46 70214.0 47 69589.5 48 68965.0 49 65576.5 50 62188.0 51 55924.0 52 49660.0 53 45328.5 54 40997.0 55 39139.0 56 37281.0 57 34965.5 58 32650.0 59 29993.5 60 27337.0 61 24914.0 62 22491.0 63 19300.5 64 16110.0 65 13442.0 66 10774.0 67 9485.0 68 8196.0 69 7128.5 70 6061.0 71 4903.5 72 3746.0 73 2871.0 74 1996.0 75 1504.0 76 1012.0 77 792.0 78 572.0 79 406.5 80 241.0 81 185.0 82 129.0 83 95.0 84 61.0 85 43.0 86 25.0 87 16.5 88 8.0 89 6.0 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 761799.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.500636787341953 #Duplication Level Percentage of deduplicated Percentage of total 1 66.86647002828357 18.388705054995135 2 7.820875877306188 4.301581337213636 3 4.152738365768604 3.426088484095872 4 3.027456711974071 3.330279497015978 5 2.2573792981437033 3.1039684084757444 6 1.8367363438771118 3.0306851440244915 7 1.5609422805220188 3.0048834691848896 8 1.391019390182548 3.060313521084812 9 1.1554726303114489 2.8598609811518827 >10 9.7330900493898 50.81789566660334 >50 0.17550098048180635 3.0088209448085035 >100 0.020289130690108917 0.9278941550152513 >500 0.001014456534505446 0.25261820726587797 >1k 0.001014456534505446 0.48640512906466943 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2426 0.3184567057714699 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1061 0.13927558319189182 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 956 0.12549241991653964 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 855 0.11223432952786759 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.002756632655070432 0.0 2 0.0 0.0 0.0 0.014308236162032242 0.0 3 0.0 0.0 0.0 0.021134183688873313 0.0 4 0.0 0.0 0.0 0.03426100585587537 0.0 5 0.0 0.0 0.0 0.06576537905668031 0.0 6 0.0 0.0 0.0 0.13796290097519162 0.0 7 0.0 0.0 0.0 0.18587580188474911 0.0 8 0.0 0.0 0.0 0.4671836009236032 0.0 9 0.0 0.0 0.0 0.605671574785475 0.0 10 0.0 0.0 0.0 0.8090060501523367 0.0 11 0.0 0.0 0.0 0.9782107878849933 0.0 12 0.0 0.0 0.0 1.1223432952786758 0.0 13 0.0 0.0 0.0 1.1769508754934044 0.0 14 0.0 0.0 0.0 1.2005791553940082 0.0 15 0.0 0.0 0.0 1.2285392866097224 0.0 16 0.0 0.0 0.0 1.3069064149467249 0.0 17 0.0 0.0 0.0 1.3966938785690188 0.0 18 1.3126822167002056E-4 0.0 0.0 1.5278308320173695 0.0 19 1.3126822167002056E-4 0.0 0.0 1.582307144010428 0.0 20 1.3126822167002056E-4 0.0 0.0 1.6430843306436476 0.0 21 1.3126822167002056E-4 0.0 0.0 1.72197653186733 0.0 22 1.3126822167002056E-4 0.0 0.0 1.8091386310562234 0.0 23 1.3126822167002056E-4 0.0 0.0 1.9027328731069482 0.0 24 1.3126822167002056E-4 0.0 0.0 1.9733551763654191 0.0 25 1.3126822167002056E-4 0.0 0.0 2.0322946078952584 0.0 26 1.3126822167002056E-4 0.0 0.0 2.091627844090108 0.0 27 1.3126822167002056E-4 0.0 0.0 2.151092348506627 0.0 28 1.3126822167002056E-4 0.0 0.0 2.213444753799887 0.0 29 1.3126822167002056E-4 0.0 0.0 2.2830169112849976 0.0 30 1.3126822167002056E-4 0.0 0.0 2.387112611069324 0.0 31 1.3126822167002056E-4 0.0 0.0 2.4720431504898275 0.0 32 1.3126822167002056E-4 0.0 0.0 2.5502790106051596 0.0 33 1.3126822167002056E-4 0.0 0.0 2.635472086469003 0.0 34 1.3126822167002056E-4 0.0 0.0 2.7176459932344357 0.0 35 1.3126822167002056E-4 0.0 0.0 2.8242357892304923 0.0 36 1.3126822167002056E-4 0.0 0.0 2.915861007956167 0.0 37 1.3126822167002056E-4 0.0 0.0 3.0164124657554026 0.0 38 1.3126822167002056E-4 0.0 0.0 3.1220833841997693 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAA 20 7.854807E-4 44.000004 1 CGTATGG 40 8.305506E-9 44.000004 2 CGTATCG 20 7.854807E-4 44.000004 33 CGCGAAT 20 7.854807E-4 44.000004 12 CGTTCGC 20 7.854807E-4 44.000004 42 GTCGTAT 20 7.854807E-4 44.000004 31 GTGCGTA 20 7.854807E-4 44.000004 16 ATTTACG 30 2.526589E-6 44.0 1 GCGACTA 30 2.526589E-6 44.0 1 CCGGATA 25 4.441422E-5 44.0 20 TTCACGG 25 4.441422E-5 44.0 2 AATCTCG 25 4.441422E-5 44.0 18 AGGCGAT 455 0.0 43.032967 7 CGTTTTA 1585 0.0 43.028393 1 ACGGGAT 155 0.0 42.580647 5 CGTTATT 965 0.0 42.40415 1 TCACGAC 125 0.0 42.24 25 TAATGGG 400 0.0 40.699997 3 CACGACC 65 0.0 40.615383 27 ACGGGTG 65 0.0 40.615383 5 >>END_MODULE