##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545773_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 288784 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.977734223502686 31.0 31.0 33.0 30.0 33.0 2 31.140031996232477 31.0 31.0 33.0 30.0 34.0 3 31.099659260900882 31.0 31.0 34.0 28.0 34.0 4 35.07458861986814 35.0 35.0 37.0 32.0 37.0 5 32.83497008144496 35.0 35.0 37.0 28.0 37.0 6 34.00690135187545 35.0 35.0 37.0 28.0 37.0 7 14.874456341071527 0.0 0.0 35.0 0.0 37.0 8 24.673652279904704 17.0 17.0 35.0 17.0 37.0 9 32.58164579755111 32.0 32.0 37.0 27.0 39.0 10 35.4051159344008 37.0 34.0 37.0 32.0 39.0 11 36.37452559698598 37.0 35.0 39.0 32.0 39.0 12 36.32108080780099 37.0 35.0 39.0 32.0 39.0 13 36.08686076790958 37.0 35.0 39.0 32.0 39.0 14 37.14588412100393 39.0 36.0 40.0 32.0 41.0 15 37.4565523020666 39.0 36.0 41.0 32.0 41.0 16 37.489798603800764 39.0 36.0 41.0 32.0 41.0 17 37.40352651116405 39.0 35.0 41.0 32.0 41.0 18 37.34166712837276 39.0 36.0 40.0 32.0 41.0 19 37.309902903207934 39.0 36.0 40.0 32.0 41.0 20 37.436270707518425 39.0 35.0 41.0 32.0 41.0 21 37.31691160175079 39.0 35.0 41.0 32.0 41.0 22 37.344697074630176 39.0 35.0 41.0 32.0 41.0 23 37.32100116349936 39.0 35.0 41.0 32.0 41.0 24 37.15075627458585 39.0 35.0 41.0 32.0 41.0 25 36.885450717491274 39.0 35.0 40.0 31.0 41.0 26 36.761555349326834 38.0 35.0 40.0 31.0 41.0 27 36.66236702864425 38.0 35.0 40.0 31.0 41.0 28 36.56975455703917 38.0 35.0 40.0 31.0 41.0 29 36.563968225386446 38.0 35.0 40.0 31.0 41.0 30 36.3106439414926 38.0 35.0 40.0 30.0 41.0 31 36.17294240678154 38.0 35.0 40.0 30.0 41.0 32 36.0837130865976 38.0 35.0 40.0 30.0 41.0 33 35.90207906255194 38.0 35.0 40.0 29.0 41.0 34 35.7425134356474 38.0 35.0 40.0 29.0 41.0 35 35.56793658928473 38.0 34.0 40.0 27.0 41.0 36 35.38104950412765 38.0 34.0 40.0 26.0 41.0 37 35.22650493102111 38.0 34.0 40.0 26.0 41.0 38 35.12358025375367 38.0 34.0 40.0 26.0 41.0 39 35.024416172641146 38.0 34.0 40.0 25.0 41.0 40 34.88880962934235 38.0 34.0 40.0 24.0 41.0 41 34.76165230760707 38.0 34.0 40.0 24.0 41.0 42 34.732737963322066 38.0 33.0 40.0 24.0 41.0 43 34.63125034627957 38.0 33.0 40.0 24.0 41.0 44 34.30941811180675 37.0 33.0 40.0 23.0 41.0 45 34.252707906255196 37.0 33.0 40.0 23.0 41.0 46 34.17299434871738 37.0 33.0 40.0 23.0 41.0 47 34.101910078120675 37.0 33.0 40.0 23.0 41.0 48 34.12504847914012 37.0 33.0 40.0 23.0 41.0 49 34.04408138955067 36.0 33.0 40.0 23.0 41.0 50 33.97634564241786 36.0 33.0 40.0 23.0 41.0 51 33.813497285168154 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 6.0 15 10.0 16 31.0 17 86.0 18 181.0 19 381.0 20 586.0 21 977.0 22 1434.0 23 2227.0 24 2980.0 25 4005.0 26 4809.0 27 5090.0 28 5847.0 29 6807.0 30 8389.0 31 10720.0 32 14308.0 33 21020.0 34 26592.0 35 29332.0 36 35954.0 37 52820.0 38 45104.0 39 9084.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.016662973017894 24.41651892071583 28.81877112305391 14.748046983212365 2 34.15701700925259 23.513421796221397 29.55911684857887 12.770444345947144 3 31.362887140561803 23.240553493268326 32.136129425452935 13.260429940716936 4 27.995664579755108 26.69088315142113 29.989196077345003 15.324256191478753 5 21.660479804975346 36.434151476536094 27.421879328494654 14.483489389993906 6 20.744224056734446 41.10061499252036 27.970039891406728 10.185121059338467 7 37.52216189262563 57.90452379633221 3.824311596210316 0.7490027148318467 8 88.75076181505901 3.020596708958945 6.611169593883318 1.6174718820987315 9 84.43854230151256 4.310834395257355 8.323868358357805 2.926754944872292 10 48.52727297911242 25.706410327441965 13.837331708127873 11.928984985317745 11 40.25915563189096 22.6733475538811 20.563466120006648 16.504030694221285 12 35.7789905257909 21.231439414926033 26.788533990802815 16.20103606848025 13 21.898027591556318 33.89696105047371 28.836777660812235 15.368233697157738 14 16.35616931685966 35.17092359687518 31.35838550612222 17.114521580142945 15 15.41775167599313 22.442725358745637 44.87817884647349 17.261344118787743 16 19.883719319629897 17.176505623580255 42.98576098398803 19.95401407280182 17 19.919732395146543 19.1156712283229 29.869037065765415 31.095559310765143 18 22.095060668181063 22.86622527563854 34.20757382680481 20.83114022937559 19 27.643844534323232 23.53766136628068 28.750554047315642 20.067940052080445 20 29.350656546069033 22.205523851736938 26.075890631059895 22.367928971134134 21 23.241938611557426 25.349049808853675 29.526912848357252 21.882098731231647 22 24.853523740927475 22.726328328439248 27.637611502022274 24.782536428611003 23 22.058008753947586 29.30979555654053 24.907889633774722 23.72430605573716 24 20.48209042052191 25.029433763643418 34.447199290819434 20.041276525015235 25 20.260471494265612 25.758698542855562 31.178666408111255 22.802163554767578 26 19.93843149204942 31.042924815779266 27.129965649066428 21.888678043104882 27 19.830392265499476 30.81507285722201 28.502964153138677 20.851570724139844 28 18.3109175023547 27.219998337858055 34.066291761316414 20.40279239847083 29 18.266939996675717 24.35349603856169 35.56741370713059 21.812150257632002 30 20.584935453487727 25.763546456867413 32.79509945149316 20.8564186381517 31 28.039988365006373 25.876779877001493 24.84313535375921 21.240096404232922 32 29.999238184940996 25.95746301734168 25.393373594104933 18.649925203612387 33 29.77554158125104 24.52248046983212 24.994113247271315 20.70786470164552 34 22.325336583744253 27.215496703418474 27.909787245830792 22.549379467006485 35 21.421200620532993 26.91111695938833 29.687240290320794 21.980442129757883 36 30.185190315252925 26.19916615878996 24.076472380741315 19.5391711452158 37 22.156698432046095 31.76872679926866 25.789863704360354 20.284711064324892 38 21.997063549227104 33.281622250540195 23.32643082719264 21.39488337304006 39 20.7476868524572 31.598357249709125 24.618053631780153 23.03590226605352 40 22.931672114798605 26.116059061443845 25.524267272425067 25.428001551332486 41 19.00901712006205 24.175162058839824 26.40935785916117 30.40646296193695 42 21.316624189705802 27.625145437420358 23.024821319740706 28.033409053133134 43 21.51781262119785 27.05620810017175 26.56172087096238 24.864258407668018 44 22.70555155410272 27.97800432156906 27.588786082331428 21.727658041996786 45 22.484625186990968 31.391628345060667 23.88497977727298 22.238766690675384 46 23.73192420632722 27.754653997451385 27.29063937060225 21.222782425619148 47 23.59341237741703 26.21093966424733 27.24216023048368 22.95348772785196 48 23.34270596708959 24.03699650950191 28.62069920771234 23.99959831569616 49 20.72621751897612 24.480234362014517 30.791525846307277 24.00202227270209 50 20.651421131364618 28.62104548728461 27.488018726799268 23.2395146545515 51 19.178001551332482 30.201811734722146 26.526054075018006 24.094132638927366 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 139.0 1 250.0 2 361.0 3 1395.5 4 2430.0 5 1824.5 6 1219.0 7 1249.5 8 1280.0 9 1324.5 10 1369.0 11 1388.0 12 1407.0 13 1334.0 14 1261.0 15 1270.0 16 1279.0 17 1255.5 18 1232.0 19 1289.0 20 1346.0 21 1294.0 22 1242.0 23 1312.0 24 1382.0 25 1577.0 26 2063.5 27 2355.0 28 2674.0 29 2993.0 30 3604.0 31 4215.0 32 5084.0 33 5953.0 34 6447.5 35 6942.0 36 7572.5 37 8203.0 38 10681.0 39 13159.0 40 16540.5 41 19922.0 42 21889.0 43 23856.0 44 24453.0 45 25050.0 46 25457.5 47 25865.0 48 24974.5 49 24084.0 50 22419.5 51 20755.0 52 18761.5 53 16768.0 54 15734.0 55 14700.0 56 13916.5 57 13133.0 58 12140.5 59 11148.0 60 10205.5 61 9263.0 62 8156.0 63 7049.0 64 6021.5 65 4994.0 66 4261.5 67 3529.0 68 3017.5 69 2506.0 70 2271.5 71 2037.0 72 1628.0 73 1219.0 74 961.0 75 514.0 76 325.0 77 252.5 78 180.0 79 129.0 80 78.0 81 57.0 82 36.0 83 30.5 84 25.0 85 20.0 86 15.0 87 9.5 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 288784.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.553043536369714 #Duplication Level Percentage of deduplicated Percentage of total 1 61.04179448424711 22.31263371320817 2 11.632462298579881 8.504038016703392 3 6.5786955157896605 7.21414030803539 4 4.492414828892047 6.5684573929569545 5 3.1914433071795005 5.832848307559401 6 2.5836752704165655 5.66647167860271 7 2.0302340456145793 5.194786342085881 8 1.6799063385299167 4.912455162344599 9 1.2649039326931535 4.161247966895229 >10 5.471628266534493 28.254933363701163 >50 0.02587528786667577 0.6631656981084273 >100 0.004976016897437648 0.2852012656703275 >500 0.001990406758975059 0.4296207841283888 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 608 0.21053797994348716 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 573 0.19841819491384563 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 328 0.11357969970635493 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0038090752950301955 0.0 2 0.0 0.0 0.0 0.016275139896947198 0.0 3 0.0 0.0 0.0 0.022508172197905702 0.0 4 0.0 0.0 0.0 0.037051914233475536 0.0 5 0.0 0.0 0.0 0.06717823702144163 0.0 6 0.0 0.0 0.0 0.11461853842318134 0.0 7 0.0 0.0 0.0 0.1440523020665965 0.0 8 0.0 0.0 0.0 0.37225054019613274 0.0 9 0.0 0.0 0.0 0.4813286054629065 0.0 10 0.0 0.0 0.0 0.6489279184442351 0.0 11 0.0 0.0 0.0 0.7877860269266995 0.0 12 0.0 0.0 0.0 0.9062136406449111 0.0 13 0.0 0.0 0.0 0.9619646517812621 0.0 14 0.0 0.0 0.0 0.9858579422682697 0.0 15 0.0 0.0 0.0 1.0163305446285114 0.0 16 0.0 0.0 0.0 1.0769294697767189 0.0 17 0.0 0.0 0.0 1.15103329824367 0.0 18 0.0 0.0 0.0 1.270499750678708 0.0 19 0.0 0.0 0.0 1.3186326112249986 0.0 20 0.0 0.0 0.0 1.376115020222727 0.0 21 0.0 0.0 0.0 1.4422544185273423 0.0 22 0.0 0.0 0.0 1.5250152363011802 0.0 23 0.0 0.0 0.0 1.6050058174968143 0.0 24 0.0 0.0 0.0 1.6624882264945426 0.0 25 0.0 0.0 0.0 1.7165078397695164 0.0 26 0.0 0.0 0.0 1.7715662917613164 0.0 27 0.0 0.0 0.0 1.8252396254640146 0.0 28 0.0 0.0 0.0 1.8872236689013242 0.0 29 0.0 0.0 0.0 1.945052357471328 0.0 30 0.0 0.0 0.0 2.0298908526788186 0.0 31 0.0 0.0 0.0 2.0984542079893624 0.0 32 0.0 0.0 0.0 2.1711729181672115 0.0 33 0.0 0.0 0.0 2.2421602304836834 0.0 34 0.0 0.0 0.0 2.314532661089257 0.0 35 0.0 0.0 0.0 2.414953737049144 0.0 36 0.0 0.0 0.0 2.500831070973461 0.0 37 0.0 0.0 0.0 2.5887860823314313 0.0 38 0.0 0.0 0.0 2.681935287273533 0.0 39 0.0 0.0 0.0 2.8097124494431824 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 25 3.883527E-5 45.000004 2 CACGACG 25 3.883527E-5 45.000004 26 TAGCCGT 25 3.883527E-5 45.000004 44 GTAGCCG 25 3.883527E-5 45.000004 43 GCTAGCG 25 3.883527E-5 45.000004 1 GATTGGA 25 3.883527E-5 45.000004 1 TAGGATG 115 0.0 45.000004 6 AAGGCGC 25 3.883527E-5 45.000004 6 ACGGTCT 25 3.883527E-5 45.000004 30 CGTTGAT 40 6.7848305E-9 45.0 25 ATTAATC 40 6.7848305E-9 45.0 19 GCGTTAG 20 7.0245046E-4 45.0 2 CCCCGAT 20 7.0245046E-4 45.0 40 TATTACG 20 7.0245046E-4 45.0 39 GGTTAAC 20 7.0245046E-4 45.0 8 AATCGTT 40 6.7848305E-9 45.0 22 TTATGCA 30 2.159837E-6 44.999996 1 TTACGGG 30 2.159837E-6 44.999996 3 CACAACG 30 2.159837E-6 44.999996 12 CGAAGGT 30 2.159837E-6 44.999996 4 >>END_MODULE