##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545772_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 719339 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53995821163596 31.0 31.0 33.0 30.0 34.0 2 31.73054568152151 31.0 31.0 34.0 30.0 34.0 3 31.778004529158018 31.0 31.0 34.0 30.0 34.0 4 35.68618968247238 37.0 35.0 37.0 35.0 37.0 5 27.095120659383127 35.0 25.0 37.0 0.0 37.0 6 31.34780819613562 35.0 26.0 37.0 17.0 37.0 7 15.00102872220191 0.0 0.0 32.0 0.0 37.0 8 25.107117784521623 17.0 17.0 35.0 17.0 37.0 9 33.250335377339475 32.0 32.0 37.0 28.0 39.0 10 36.02479915589173 37.0 35.0 39.0 32.0 39.0 11 37.02266664257047 39.0 37.0 39.0 34.0 39.0 12 37.08940152000656 39.0 37.0 39.0 34.0 39.0 13 36.67989640489394 39.0 35.0 39.0 33.0 39.0 14 38.02367868279073 40.0 37.0 41.0 33.0 41.0 15 38.28254967407578 40.0 37.0 41.0 33.0 41.0 16 38.303524485673655 40.0 37.0 41.0 34.0 41.0 17 38.31167780420636 40.0 37.0 41.0 34.0 41.0 18 38.27240841939614 40.0 37.0 41.0 34.0 41.0 19 38.219153973300486 40.0 37.0 41.0 34.0 41.0 20 38.247258941889704 40.0 37.0 41.0 34.0 41.0 21 38.13204066511061 40.0 36.0 41.0 34.0 41.0 22 38.031912630901424 40.0 36.0 41.0 34.0 41.0 23 37.9284398593709 40.0 36.0 41.0 34.0 41.0 24 37.775575910662425 40.0 35.0 41.0 33.0 41.0 25 37.61143077186139 39.0 35.0 41.0 33.0 41.0 26 37.37582141382575 39.0 35.0 41.0 33.0 41.0 27 37.181145468270174 39.0 35.0 40.0 33.0 41.0 28 37.198009561555814 39.0 35.0 40.0 33.0 41.0 29 37.10411502782416 39.0 35.0 40.0 33.0 41.0 30 36.8877525061202 39.0 35.0 40.0 32.0 41.0 31 36.71266815785047 38.0 35.0 40.0 31.0 41.0 32 36.47079610586942 38.0 35.0 40.0 31.0 41.0 33 36.252629149816705 38.0 35.0 40.0 30.0 41.0 34 35.975334299961496 38.0 35.0 40.0 30.0 41.0 35 35.76416821554233 38.0 35.0 40.0 29.0 41.0 36 35.57507378301469 38.0 35.0 40.0 28.0 41.0 37 35.46921687827297 38.0 35.0 40.0 28.0 41.0 38 35.28602369675494 38.0 34.0 40.0 27.0 41.0 39 35.210183237666804 38.0 34.0 40.0 27.0 41.0 40 34.977109540842356 38.0 34.0 40.0 26.0 41.0 41 34.76342030669823 38.0 34.0 40.0 25.0 40.0 42 34.77437619814858 38.0 34.0 40.0 25.0 41.0 43 34.65066401237803 37.0 34.0 40.0 25.0 41.0 44 34.41673536399389 37.0 34.0 40.0 24.0 40.0 45 34.186223741518255 37.0 33.0 40.0 23.0 40.0 46 34.144638341588596 37.0 33.0 40.0 23.0 40.0 47 33.99258763948569 36.0 33.0 39.0 23.0 40.0 48 33.92418178355407 36.0 33.0 39.0 23.0 40.0 49 33.78312033686482 36.0 33.0 39.0 24.0 40.0 50 33.87912653144067 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 2.0 14 13.0 15 15.0 16 41.0 17 86.0 18 261.0 19 546.0 20 975.0 21 1673.0 22 2697.0 23 4152.0 24 6379.0 25 9476.0 26 11725.0 27 12521.0 28 12762.0 29 13842.0 30 17064.0 31 22216.0 32 30670.0 33 54368.0 34 57685.0 35 73059.0 36 100469.0 37 185030.0 38 80456.0 39 21150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.3420834960985 22.545142137434507 27.341350879070923 15.771423487396069 2 34.56798533097747 23.298611642076963 29.291752567287467 12.841650459658101 3 30.077612919638725 23.12456296683483 34.04027864470021 12.757545468826242 4 26.43468517625209 26.778751047836973 31.957811268400572 14.828752507510368 5 17.036473762718273 47.58215528422621 24.2793731467361 11.101997806319412 6 19.73019675007194 40.67261750023285 29.79735562787503 9.799830121820172 7 38.970638322126284 55.666799659131506 4.4179448076637025 0.944617211078504 8 86.66470189993869 2.7850568369016555 8.771803002478665 1.7784382606809863 9 82.68924665561022 4.30047585352664 10.26150396405589 2.7487735268072493 10 45.37832649140391 25.14461192845098 17.074147237950395 12.402914342194709 11 39.45358169096907 22.409323003479585 23.337675282446803 14.799420023104545 12 36.38145575312892 20.76003108409248 27.922578923150283 14.935934239628326 13 23.13971576683594 32.723931275796254 27.357615811182214 16.778737146185595 14 17.72682977010839 35.15546911817655 30.093599818722467 17.024101292992594 15 16.677255091132277 23.341984794373722 42.40184391503867 17.578916199455332 16 18.9614354289146 18.398001498598017 41.51616970579935 21.12439336668803 17 19.41323909867253 19.42213615555392 30.74433611968766 30.420288626085895 18 21.846306122704316 23.796012728352 33.711921639171514 20.645759509772166 19 27.641070482762647 25.401236412873484 26.505861631303183 20.451831473060686 20 28.8175672388123 23.574281388886188 26.543674123049076 21.064477249252437 21 24.12812317975252 25.920880141351994 29.626782365477194 20.32421431341829 22 22.89421260351517 23.850785234778037 27.902282512139614 25.352719649567174 23 21.10534810430131 28.336570101162316 27.791347334149823 22.76673446038655 24 21.110769748338402 24.276870849488212 36.537154248553186 18.0752051536202 25 21.153030768524992 24.018300133872902 32.877266490486406 21.9514026071157 26 18.7631978802762 29.461908780143993 28.7871226222963 22.987770717283507 27 19.056800757361966 28.631285110358263 30.904066094011306 21.407848038268465 28 17.962740793978917 26.57008726066569 35.99429476227481 19.472877183080577 29 18.998413821577863 24.612178680705483 35.174236347535725 21.215171150180932 30 20.83315377033638 26.874950475366973 32.67082696753547 19.621068786761178 31 27.28574427356226 25.634506122982348 27.055393910242596 20.024355693212797 32 27.554741227710437 25.851232867952383 26.945570864362978 19.6484550399742 33 26.795711062517118 25.644098262432596 26.272313888166778 21.287876786883515 34 20.578197484079134 26.483340956072173 29.47733961317265 23.461121946676045 35 21.2800918621123 25.102072875236846 30.45573783709767 23.16209742555318 36 27.32605906255604 25.89418897070783 26.462766512033966 20.316985454702163 37 21.43203691166474 30.64035176738645 26.98505155427413 20.942559766674684 38 22.0829122291437 30.315609191215824 25.67051140004921 21.930967179591264 39 21.54060880892041 28.80936526449977 26.02569859273583 23.624327333843986 40 23.8126947100046 24.91718091192053 28.115950893806673 23.154173484268195 41 20.576668302427645 24.203192097189223 28.471138086493298 26.749001513889837 42 22.388053476872518 26.806971400132625 25.032286585323472 25.77268853767139 43 22.12809259611949 26.382136934046397 25.9767647798882 25.51300568994591 44 21.416189029094763 27.920354658929934 28.346857323181418 22.316598988793878 45 20.394556669386755 31.273293954588866 25.256520222037178 23.0756291539872 46 22.17758247502221 29.45996254895119 27.654972134139815 20.707482841886787 47 22.126702430981776 27.69778922038149 27.949687143335755 22.225821205300978 48 22.277396331910268 25.85415221474159 29.42840580032502 22.440045653023123 49 21.679486306178312 25.73418096335664 30.18840908111475 22.397923649350307 50 20.423611120765038 29.01413658928544 28.831468890189466 21.730783399760057 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 310.0 1 732.5 2 1155.0 3 6040.0 4 10925.0 5 7871.0 6 4817.0 7 4783.0 8 4749.0 9 4839.0 10 4929.0 11 4831.5 12 4734.0 13 4583.0 14 4432.0 15 4114.5 16 3797.0 17 3565.0 18 3333.0 19 3305.5 20 3278.0 21 3418.5 22 3559.0 23 3712.5 24 3866.0 25 4318.5 26 4771.0 27 5952.0 28 7133.0 29 8756.5 30 10380.0 31 12345.5 32 14311.0 33 16238.5 34 18166.0 35 20219.0 36 22272.0 37 25040.0 38 27808.0 39 34081.5 40 40355.0 41 46130.0 42 51905.0 43 54394.5 44 56884.0 45 57240.0 46 57596.0 47 57601.0 48 57606.0 49 54917.5 50 52229.0 51 47878.5 52 43528.0 53 40075.5 54 36623.0 55 35140.0 56 33657.0 57 33260.0 58 32863.0 59 30299.5 60 27736.0 61 24622.5 62 21509.0 63 18386.5 64 15264.0 65 13057.0 66 10850.0 67 9391.0 68 7932.0 69 6888.5 70 5845.0 71 4870.5 72 3896.0 73 3010.0 74 2124.0 75 1626.5 76 1129.0 77 848.0 78 567.0 79 438.5 80 310.0 81 214.0 82 118.0 83 74.5 84 31.0 85 26.5 86 22.0 87 20.5 88 19.0 89 12.0 90 5.0 91 5.0 92 5.0 93 4.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 719339.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.510042772344732 #Duplication Level Percentage of deduplicated Percentage of total 1 66.82600549836866 20.38864286060172 2 8.585551480051743 5.238910857610927 3 4.687111725137283 4.290119376380911 4 3.2340174828073374 3.9468004690785006 5 2.44846218315409 3.735134296724993 6 1.8995672909538575 3.4773527577569525 7 1.598962463013929 3.4149089196550055 8 1.3548314045584673 3.3068771281915788 9 1.1409874360705574 3.1330417929498595 >10 8.087197812627341 44.471583753889696 >50 0.11091916612348506 2.1160618434132665 >100 0.02443153438262617 1.3585790880078632 >500 4.886306876525235E-4 0.13581318437124584 >1k 0.0014658920629575703 0.9861736713674987 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3618 0.5029617468259054 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1540 0.21408543120837323 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1457 0.20254706056532457 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 911 0.12664404404599222 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004587544954465141 0.0 2 0.0 0.0 0.0 0.015847882569970488 0.0 3 0.0 0.0 0.0 0.021964609175924008 0.0 4 0.0 0.0 0.0 0.03378101284651604 0.0 5 0.0 0.0 0.0 0.057552836701471766 0.0 6 0.0 0.0 0.0 0.11510567340294353 0.0 7 0.0 0.0 0.0 0.15750571010330316 0.0 8 0.0 0.0 0.0 0.40759641837853916 0.0 9 0.0 0.0 0.0 0.5210338936162227 0.0 10 0.0 0.0 0.0 0.6967507670236147 0.0 11 0.0 0.0 0.0 0.8409108918048375 0.0 12 0.0 0.0 0.0 0.9818736367693118 0.0 13 0.0 0.0 0.0 1.0352559780576334 0.0 14 0.0 0.0 0.0 1.0580546863161875 0.0 15 0.0 0.0 0.0 1.0946160294381369 0.0 16 0.0 0.0 0.0 1.1660705175167758 0.0 17 0.0 0.0 0.0 1.248368293669605 0.0 18 0.0 0.0 0.0 1.3819631634041807 0.0 19 0.0 0.0 0.0 1.4411841982709126 0.0 20 0.0 0.0 0.0 1.5054098276334247 0.0 21 0.0 0.0 0.0 1.5856223560796787 0.0 22 0.0 0.0 0.0 1.6709784955354847 0.0 23 0.0 0.0 0.0 1.7689851377445127 0.0 24 0.0 0.0 0.0 1.84530520380516 0.0 25 0.0 0.0 0.0 1.9025800074790884 0.0 26 0.0 0.0 0.0 1.9637472735386237 0.0 27 0.0 0.0 0.0 2.031587332259199 0.0 28 0.0 0.0 0.0 2.100400506576176 0.0 29 0.0 0.0 0.0 2.1801959854811153 0.0 30 0.0 0.0 0.0 2.2733370497081347 0.0 31 0.0 0.0 0.0 2.352993512099302 0.0 32 0.0 0.0 0.0 2.427089313939603 0.0 33 0.0 0.0 0.0 2.5067457763307703 0.0 34 0.0 0.0 0.0 2.601972088264365 0.0 35 0.0 0.0 0.0 2.71554858001582 0.0 36 0.0 0.0 0.0 2.806882429563808 0.0 37 0.0 0.0 0.0 2.902386774524946 0.0 38 0.0 0.0 0.0 3.008734407560274 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 40 8.305506E-9 44.0 6 ACACGAC 40 8.305506E-9 44.0 26 ACGCCCG 20 7.8545156E-4 44.0 27 CCGGATA 20 7.8545156E-4 44.0 20 CGATTAC 20 7.8545156E-4 44.0 10 CGTTCGA 40 8.305506E-9 44.0 14 TTATACG 20 7.8545156E-4 44.0 1 TCTACGG 30 2.5263907E-6 44.0 2 TTGCACG 25 4.441172E-5 44.0 1 CTAGGCG 40 8.305506E-9 44.0 5 CGTTTTA 1870 0.0 43.294117 1 CGGTCTA 140 0.0 42.428574 31 CGTTATT 1105 0.0 41.809956 1 CGAATAT 80 0.0 41.25 14 GTTATTT 1185 0.0 41.21519 2 GACGGTC 155 0.0 41.16129 29 TAAGGAC 285 0.0 40.91228 5 GTTTTAT 2150 0.0 40.827908 2 TTACTGG 985 0.0 40.64975 40 ACGGGTA 65 0.0 40.615387 5 >>END_MODULE