##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545770_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 960480 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56036877394636 31.0 31.0 33.0 30.0 34.0 2 31.74580418124271 31.0 31.0 34.0 30.0 34.0 3 31.792993086789938 31.0 31.0 34.0 30.0 34.0 4 35.688968015992 37.0 35.0 37.0 35.0 37.0 5 27.128182783608196 35.0 25.0 37.0 0.0 37.0 6 31.35982217224721 35.0 26.0 37.0 17.0 37.0 7 14.972244086290189 0.0 0.0 32.0 0.0 37.0 8 25.083801849075464 17.0 17.0 35.0 17.0 37.0 9 33.20914646843245 32.0 32.0 37.0 28.0 39.0 10 36.118277319673496 37.0 35.0 39.0 32.0 39.0 11 37.09588643178411 39.0 37.0 39.0 34.0 39.0 12 36.926318090954524 39.0 35.0 39.0 33.0 39.0 13 36.34079314509412 39.0 35.0 39.0 32.0 39.0 14 37.65198234216225 40.0 36.0 41.0 33.0 41.0 15 37.97886889888389 40.0 36.0 41.0 33.0 41.0 16 38.07080730468099 40.0 36.0 41.0 33.0 41.0 17 38.10891325170748 40.0 36.0 41.0 34.0 41.0 18 38.077894386140265 40.0 36.0 41.0 34.0 41.0 19 38.01242191404298 40.0 36.0 41.0 34.0 41.0 20 38.01854593536565 40.0 36.0 41.0 34.0 41.0 21 37.86050516408462 40.0 35.0 41.0 34.0 41.0 22 37.77821714142929 40.0 35.0 41.0 33.0 41.0 23 37.689000291520905 39.0 35.0 41.0 33.0 41.0 24 37.54176349325337 39.0 35.0 41.0 33.0 41.0 25 37.36275299850075 39.0 35.0 41.0 33.0 41.0 26 37.11129747626187 39.0 35.0 40.0 33.0 41.0 27 36.91250728802265 38.0 35.0 40.0 32.0 41.0 28 36.956248958853905 39.0 35.0 40.0 32.0 41.0 29 36.94575941196069 38.0 35.0 40.0 33.0 41.0 30 36.76559636848243 38.0 35.0 40.0 32.0 41.0 31 36.55428431617525 38.0 35.0 40.0 32.0 41.0 32 36.291004497751125 38.0 35.0 40.0 31.0 41.0 33 36.105163043478264 38.0 35.0 40.0 31.0 41.0 34 35.88892116441779 38.0 35.0 40.0 30.0 41.0 35 35.72549766783275 38.0 35.0 40.0 30.0 41.0 36 35.53617149758454 38.0 35.0 40.0 29.0 41.0 37 35.36928306679993 38.0 34.0 40.0 29.0 41.0 38 35.21076857404631 38.0 34.0 40.0 28.0 41.0 39 35.18496064467766 38.0 34.0 40.0 28.0 41.0 40 34.94106384307846 37.0 34.0 40.0 27.0 41.0 41 34.78288564051308 37.0 34.0 40.0 26.0 40.0 42 34.769760952856906 37.0 34.0 40.0 26.0 41.0 43 34.6506361402632 37.0 34.0 40.0 26.0 41.0 44 34.43499500249875 37.0 34.0 40.0 25.0 40.0 45 34.22492191404298 36.0 33.0 40.0 24.0 40.0 46 34.21774945860403 36.0 33.0 39.0 24.0 40.0 47 34.07177973513243 36.0 33.0 39.0 24.0 40.0 48 34.021133183408296 36.0 33.0 39.0 24.0 40.0 49 33.93352802765284 36.0 33.0 39.0 24.0 40.0 50 33.93307304680993 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 0.0 14 5.0 15 11.0 16 45.0 17 142.0 18 355.0 19 698.0 20 1303.0 21 2167.0 22 3466.0 23 5298.0 24 7888.0 25 11770.0 26 14717.0 27 16346.0 28 17126.0 29 19229.0 30 23500.0 31 31688.0 32 44392.0 33 87907.0 34 84968.0 35 100903.0 36 122938.0 37 231509.0 38 107203.0 39 24903.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.5994294519407 24.094202898550723 28.512826919873397 14.793540729635183 2 33.13426620023321 24.511181909045476 29.69837997667833 12.656171914042979 3 30.51120273196735 23.235361485923704 33.52709062135599 12.726345160752958 4 26.407941862402133 26.37264700982842 32.132579543561555 15.086831584207896 5 17.11769115442279 48.763118440779614 23.28492003998001 10.834270364817591 6 20.58179243711478 40.77450857904381 28.745731301016157 9.897967682825254 7 38.935844577711144 56.06530068299184 3.958333333333333 1.040521405963685 8 87.24897967682826 3.4497334666000334 7.6164001332667 1.6848867233050142 9 83.03889721805764 5.060907046476762 9.23871397634516 2.6614817591204396 10 54.819361152756954 20.735882058970514 13.999354489421956 10.445402298850574 11 50.641658337497915 18.387993503248374 18.987693653173412 11.982654506080294 12 44.2407962685324 20.785336498417458 22.676890721306016 12.296976511744127 13 22.011598367482925 41.98567382975179 23.147280526403467 12.85544727636182 14 15.038001832417125 44.018095119107116 27.706667499583542 13.23723554889222 15 14.192278860569715 21.961727469598536 50.0668415792104 13.779152090621356 16 15.61864900882892 15.656754955855407 49.636327669498584 19.08826836581709 17 16.182846076961518 15.930368149258703 30.156692487089785 37.730093286689986 18 21.315696318507413 22.707292187239712 35.3404547726137 20.63655672163918 19 30.53317091454273 22.494898384141262 26.443861402632017 20.52806929868399 20 32.838893053473264 22.23575712143928 24.124604364484426 20.800745460603032 21 23.06096951524238 27.389326170248207 28.158733133433284 21.39097118107613 22 22.99922955189072 24.06890304847576 25.04758037647843 27.884287023155093 23 20.050495585540563 29.55418124271198 24.9695985340663 25.425724637681157 24 20.567320506413463 23.10251124437781 39.59676411794103 16.733404131267697 25 18.147905214059637 23.24462768615692 37.25033316674996 21.357133933033484 26 16.23063468265867 33.53333749791771 29.015804597701152 21.220223221722474 27 18.19694319506913 32.314571880726305 30.715475595535562 18.773009328668998 28 15.079751790771281 27.76424287856072 40.70506413459937 16.450941196068634 29 16.234903381642514 24.492441279360317 38.36665000832917 20.906005330668 30 19.15323588205897 29.292645343994668 32.142053973013496 19.412064800932864 31 30.379810094952525 25.160336498417458 25.01686656671664 19.442986839913377 32 30.13826420123272 25.539417791104448 27.480738797268035 16.8415792103948 33 29.033816425120772 26.08175079127103 25.417083125104117 19.467349658504084 34 19.782712810261536 26.978281692487087 28.559886723305016 24.67911877394636 35 20.277257204730965 24.39030484757621 32.04585207396302 23.286585873729802 36 31.48488255872064 23.648384141262703 26.113401632517075 18.753331667499584 37 20.939322005663836 31.998479926703315 28.534482758620687 18.52771530901216 38 21.04853823088456 32.81192736964851 23.766450108279194 22.373084291187737 39 22.152569548559054 30.260598867233053 26.40315259037148 21.183678993836416 40 23.94854656005331 25.373667333000167 25.472472097284694 25.205314009661834 41 18.037127269698484 23.45847909378644 27.610465600533068 30.89392803598201 42 22.21097784441113 26.576295185740463 23.232342162252205 27.980384807596202 43 22.948005164084627 26.082063135099116 24.837164750957854 26.132766949858404 44 19.999687656171915 30.325878727303014 28.233175079127104 21.441258537397967 45 17.76476345160753 37.11508828918874 22.907088122605366 22.21306013659837 46 22.906567549558552 31.475095785440615 26.343911377644513 19.274425287356323 47 22.783087622855238 26.599720972846907 26.779214559386972 23.837976844910877 48 23.58581126103615 23.561344327836082 30.459145427286355 22.39369898384141 49 21.140783774779276 23.14603115109112 32.46189405297351 23.25129102115609 50 19.637472930201564 32.294373646510074 27.22586623354989 20.842287189738464 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 793.0 1 1156.5 2 1520.0 3 6259.0 4 10998.0 5 8182.0 6 5366.0 7 5567.5 8 5769.0 9 6078.0 10 6387.0 11 6389.0 12 6391.0 13 5927.0 14 5463.0 15 5161.5 16 4860.0 17 4526.5 18 4193.0 19 4044.0 20 3895.0 21 4169.5 22 4444.0 23 4856.0 24 5268.0 25 6019.5 26 6771.0 27 7228.0 28 7685.0 29 9235.0 30 10785.0 31 13158.0 32 15531.0 33 16706.5 34 17882.0 35 19011.5 36 20141.0 37 26019.0 38 31897.0 39 45679.0 40 59461.0 41 75207.0 42 90953.0 43 95044.0 44 99135.0 45 95530.0 46 91925.0 47 85855.5 48 79786.0 49 76629.0 50 73472.0 51 68768.0 52 64064.0 53 56166.0 54 48268.0 55 43229.0 56 38190.0 57 36849.0 58 35508.0 59 33885.5 60 32263.0 61 28317.5 62 24372.0 63 20306.0 64 16240.0 65 13627.0 66 11014.0 67 9309.0 68 7604.0 69 6502.0 70 5400.0 71 4425.0 72 3450.0 73 2673.0 74 1896.0 75 1331.0 76 766.0 77 544.5 78 323.0 79 269.5 80 216.0 81 152.5 82 89.0 83 55.0 84 21.0 85 15.5 86 10.0 87 8.5 88 7.0 89 5.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 960480.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.520103898813634 #Duplication Level Percentage of deduplicated Percentage of total 1 71.85326220968282 14.744364060113908 2 6.254487069943733 2.566854490180637 3 2.789889082323395 1.7174644150632565 4 1.8683721676835878 1.5335676401007545 5 1.4528754603774099 1.4906577699490566 6 1.1412553817543565 1.4051207405207766 7 0.9788301976396624 1.4059988148403506 8 0.890832608803252 1.4623982151275143 9 0.7700644460484323 1.4221622197526576 >10 10.41930865263984 47.84683735222408 >50 1.4418955596885357 19.208559656878204 >100 0.13629596713823114 4.153097021635766 >500 5.262392553599658E-4 0.0607954660213452 >1k 0.002104957021439863 0.9821221375917132 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3602 0.3750208229218724 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2576 0.2681992337164751 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1490 0.15513076794935868 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1427 0.14857154755955354 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008953856405130767 0.0 2 0.0 0.0 0.0 0.029672663668165917 0.0 3 0.0 0.0 0.0 0.03768948858903881 0.0 4 0.0 0.0 0.0 0.052994336165250705 0.0 5 0.0 0.0 0.0 0.08828918873896385 0.0 6 0.0 0.0 0.0 0.14784274529401967 0.0 7 0.0 0.0 0.0 0.18584457771114443 0.0 8 0.0 0.0 0.0 0.40667166416791606 0.0 9 0.0 0.0 0.0 0.5080792936864901 0.0 10 0.0 0.0 0.0 0.6719556888222555 0.0 11 0.0 0.0 0.0 0.8096993170081626 0.0 12 0.0 0.0 0.0 0.9483799766783275 0.0 13 0.0 0.0 0.0 0.9996043644844245 0.0 14 0.0 0.0 0.0 1.0160544727636183 0.0 15 0.0 0.0 0.0 1.0443736465100784 0.0 16 0.0 0.0 0.0 1.1149633516575046 0.0 17 0.0 0.0 0.0 1.2029401965683826 0.0 18 0.0 0.0 0.0 1.344536065300683 0.0 19 0.0 0.0 0.0 1.3987797767782775 0.0 20 0.0 0.0 0.0 1.459895052473763 0.0 21 0.0 0.0 0.0 1.5290271530901216 0.0 22 0.0 0.0 0.0 1.6005538897218057 0.0 23 0.0 0.0 0.0 1.685615525570548 0.0 24 0.0 0.0 0.0 1.7472513743128435 0.0 25 0.0 0.0 0.0 1.7974346160253207 0.0 26 0.0 0.0 0.0 1.853656505080793 0.0 27 0.0 0.0 0.0 1.9057138097617858 0.0 28 0.0 0.0 0.0 1.9565217391304348 0.0 29 0.0 0.0 0.0 2.012639513576545 0.0 30 0.0 0.0 0.0 2.090829585207396 0.0 31 0.0 0.0 0.0 2.1676661669165416 0.0 32 0.0 0.0 0.0 2.230863734799267 0.0 33 0.0 0.0 0.0 2.3003081792437117 0.0 34 0.0 0.0 0.0 2.3745418957188074 0.0 35 0.0 0.0 0.0 2.470223221722472 0.0 36 0.0 0.0 0.0 2.5483091787439616 0.0 37 0.0 0.0 0.0 2.63003914709312 0.0 38 0.0 0.0 0.0 2.7079168748958855 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCGA 20 7.8558363E-4 44.0 13 AGCCGAA 20 7.8558363E-4 44.0 37 TCGTTAA 35 1.445751E-7 44.0 1 GTCGATA 20 7.8558363E-4 44.0 1 TTTACGG 50 2.7284841E-11 44.0 2 GCGAATA 25 4.4422908E-5 44.0 1 ACGTTAC 20 7.8558363E-4 44.0 23 CGGTTGA 30 2.5272802E-6 44.0 29 CGCATCG 45 4.802132E-10 44.0 21 TATGCGC 25 4.4422908E-5 44.0 11 GTAATCG 30 2.5272802E-6 44.0 28 GTTACGG 110 0.0 44.0 2 CTAACGG 35 1.445751E-7 44.0 2 GCCGAAC 20 7.8558363E-4 44.0 41 CGTAGAT 20 7.8558363E-4 44.0 23 TAACACG 20 7.8558363E-4 44.0 1 CGCTAAG 35 1.445751E-7 44.0 2 TACCTCG 20 7.8558363E-4 44.0 25 TTGCGAA 50 2.7284841E-11 44.0 1 ACGCTAG 40 8.310963E-9 44.0 2 >>END_MODULE