SRR1545767_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545767_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	531115
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1410	0.26547922766255894	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1157	0.2178435931954473	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATAG	25	3.8879614E-5	45.0	2
GCGGTCA	20	7.029857E-4	45.0	9
GCGCAAA	25	3.8879614E-5	45.0	1
GCGGAAA	25	3.8879614E-5	45.0	1
TACACCC	20	7.029857E-4	45.0	14
CGCGAAG	30	2.1632877E-6	44.999996	2
AGGCGAT	435	0.0	43.96552	7
CGTTTTA	1045	0.0	42.84689	1
CGTTTTT	1200	0.0	42.750004	1
GCTACGG	60	3.6379788E-12	41.249996	2
CGAAGGA	240	0.0	41.249996	4
CGAATAT	55	6.002665E-11	40.909092	14
ACGGGAT	155	0.0	40.645164	5
GGCGATT	250	0.0	40.500004	8
CGCATGG	50	1.0786607E-9	40.5	2
ACACGAC	45	1.9250365E-8	40.000004	26
CGACGGT	45	1.9250365E-8	40.000004	28
CACGACG	45	1.9250365E-8	40.000004	26
CACGACC	45	1.9250365E-8	40.000004	27
ACCCGCT	130	0.0	39.80769	34