##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545766_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 584908 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57715059462343 31.0 31.0 33.0 30.0 34.0 2 31.75961347767512 31.0 31.0 34.0 30.0 34.0 3 31.779072948224336 31.0 31.0 34.0 30.0 34.0 4 35.669965191106975 37.0 35.0 37.0 35.0 37.0 5 26.995132567856825 35.0 22.0 37.0 0.0 37.0 6 31.289436971284374 35.0 25.0 37.0 17.0 37.0 7 15.095165393531975 0.0 0.0 32.0 0.0 37.0 8 25.179140993113446 17.0 17.0 35.0 17.0 37.0 9 33.38897057314997 32.0 32.0 37.0 28.0 39.0 10 36.21283689058792 37.0 35.0 39.0 33.0 39.0 11 37.125703529443946 39.0 37.0 39.0 34.0 39.0 12 36.818292791344966 39.0 35.0 39.0 33.0 39.0 13 36.06825175925103 38.0 35.0 39.0 32.0 39.0 14 37.33923967529936 39.0 35.0 41.0 33.0 41.0 15 37.72565771027239 40.0 35.0 41.0 33.0 41.0 16 37.872032866707244 40.0 35.0 41.0 33.0 41.0 17 37.92094654202028 40.0 35.0 41.0 34.0 41.0 18 37.912010093895105 40.0 36.0 41.0 34.0 41.0 19 37.823428641769304 40.0 36.0 41.0 34.0 41.0 20 37.80930847244353 39.0 35.0 41.0 34.0 41.0 21 37.62381092411114 39.0 35.0 41.0 33.0 41.0 22 37.54098935217162 39.0 35.0 41.0 33.0 41.0 23 37.46119731650106 39.0 35.0 41.0 33.0 41.0 24 37.31621725126003 39.0 35.0 41.0 33.0 41.0 25 37.16135529006271 38.0 35.0 41.0 33.0 41.0 26 36.92426843195853 38.0 35.0 40.0 33.0 41.0 27 36.68294501015544 38.0 35.0 40.0 32.0 41.0 28 36.76782502547409 38.0 35.0 40.0 32.0 41.0 29 36.78331122159382 38.0 35.0 40.0 33.0 41.0 30 36.58723423170824 38.0 35.0 40.0 32.0 41.0 31 36.34085702366868 38.0 35.0 40.0 31.0 41.0 32 36.00628816839571 38.0 35.0 40.0 31.0 41.0 33 35.78111600456824 38.0 35.0 40.0 30.0 41.0 34 35.58080074131316 38.0 35.0 40.0 30.0 41.0 35 35.41973609524917 38.0 34.0 40.0 29.0 41.0 36 35.21057841575085 38.0 34.0 40.0 28.0 41.0 37 34.991781613518704 37.0 34.0 40.0 27.0 41.0 38 34.84713493404091 37.0 34.0 40.0 27.0 41.0 39 34.88261743727219 37.0 34.0 40.0 27.0 41.0 40 34.68346987902371 37.0 34.0 40.0 26.0 41.0 41 34.54399837239361 37.0 34.0 40.0 25.0 40.0 42 34.534877279845716 37.0 34.0 40.0 25.0 41.0 43 34.4179289734454 37.0 33.0 40.0 24.0 41.0 44 34.194938349278864 36.0 33.0 40.0 24.0 40.0 45 33.922403181355016 36.0 33.0 39.0 23.0 40.0 46 33.952667769974084 36.0 33.0 39.0 23.0 40.0 47 33.83493130543607 36.0 33.0 39.0 23.0 40.0 48 33.85924111142265 36.0 33.0 39.0 23.0 40.0 49 33.8011909565265 36.0 33.0 39.0 24.0 40.0 50 33.78585008240612 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 3.0 15 8.0 16 32.0 17 82.0 18 227.0 19 420.0 20 793.0 21 1459.0 22 2239.0 23 3516.0 24 5251.0 25 7824.0 26 10199.0 27 10977.0 28 11105.0 29 12479.0 30 14884.0 31 20295.0 32 28839.0 33 59480.0 34 53562.0 35 61293.0 36 68357.0 37 133933.0 38 64032.0 39 13616.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.23090810862563 23.141930012925112 29.930860921717606 16.69630095673166 2 31.952033482188654 23.570031526325508 31.66036368112592 12.81757131035992 3 28.53252135378555 23.60422493793896 35.2710169804482 12.592236727827283 4 24.483508517578834 26.95757281487003 34.33206589754286 14.226852770008275 5 17.16509262995206 47.617745012890914 24.840487734823256 10.376674622333768 6 19.831494867568917 39.40636818097889 29.913251314736677 10.848885636715517 7 39.46398407954755 55.46427814288742 4.175528459176485 0.896209318388533 8 88.71395159580652 2.349600279018239 7.769768920924316 1.166679204250925 9 86.13234901899102 3.22973869394845 8.735048930772018 1.9028633562885102 10 60.2793943662935 16.963180534374636 13.521100754306662 9.2363243450252 11 54.89666751010416 16.73972658948074 17.75253544147114 10.61107045894397 12 48.396499962387246 19.34235811443851 21.641010210152707 10.620131713021536 13 20.42834086728169 45.73830414355762 22.767170221641695 11.066184767518994 14 13.00170283189835 48.45907390563986 27.775992121837966 10.763231140623825 15 11.114226510835893 21.268985891798366 55.478810342823145 12.137977254542594 16 12.80509071512101 14.61580282711127 54.291957025720286 18.287149432047435 17 13.623339055030875 14.527925759264704 30.526852086140043 41.321883099564374 18 20.860374623017634 20.27669308677604 38.398175439556304 20.46475685065002 19 30.438291150061207 21.259069802430467 26.99997264527071 21.302666402237616 20 33.69247813331327 21.300956731656946 24.50487939983724 20.50168573519254 21 21.377208039554937 27.73530196201796 29.845719326800115 21.041770671626992 22 22.456181143017364 22.53277438503149 26.916369753875824 28.094674718075318 23 17.946070151203266 31.16267857509215 24.660801356794572 26.230449916910008 24 19.115313861325202 21.886347938479215 42.6639745053923 16.334363694803287 25 15.460551061021564 22.365739569299787 41.006277910372226 21.16743145930642 26 14.6433285234601 36.13884576719757 28.982848584734693 20.23497712460763 27 15.726233869258072 35.23579776648636 31.232091200667455 17.805877163588118 28 12.955883660336326 28.038768490087328 43.97358217018745 15.031765679388895 29 13.15420544769434 22.665102887975543 42.876315591511826 21.30437607281829 30 16.354879741771356 30.099605408029984 34.79572855902125 18.74978629117742 31 31.790469612315096 24.423670047255293 24.61122090995507 19.174639430474535 32 31.965197945659828 25.978615440376952 26.420736252538862 15.635450361424361 33 29.31144727033995 26.414239504332304 25.552565531673356 18.721747693654386 34 18.833731116688437 27.57852516977029 29.215021849590023 24.372721863951256 35 18.780560361629522 24.627633747529526 33.81608731629589 22.775718574545056 36 33.42576952272836 21.679819732333975 26.628803162206705 18.265607582730958 37 19.937152509454478 32.32935777934308 28.702804543620537 19.03068516758191 38 19.737121051515793 34.97541493704993 21.937638055899388 23.349825955534886 39 19.97066205283566 31.923311016433352 27.248387780642425 20.857639150088563 40 23.635511909565267 25.05043528212984 24.994700021199915 26.319352787104982 41 16.591327183078363 22.58064516129032 27.527576986466247 33.300450669165066 42 22.24674649688498 24.532405096186068 23.364871056644805 29.855977350284146 43 21.949092848789896 26.038966811874687 25.06274491031068 26.949195429024737 44 19.02384648525922 30.32442708938842 28.96233253776662 21.68939388758574 45 15.85326239340204 39.66709294453145 22.011324857926375 22.468319804140137 46 22.307952703673056 33.155812538040166 26.174714655980086 18.361520102306688 47 21.792316056542223 27.24360070301654 26.07435699289461 24.889726247546623 48 23.676714970559473 22.20930471116825 31.557954413343637 22.55602590492864 49 20.98774508127774 21.21530223556525 34.138531187810734 23.65842149534628 50 18.98366922661342 33.77009717767581 26.803018594377235 20.44321500133354 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 426.0 1 562.0 2 698.0 3 3559.0 4 6420.0 5 4850.5 6 3281.0 7 3518.5 8 3756.0 9 4206.5 10 4657.0 11 4627.5 12 4598.0 13 4293.0 14 3988.0 15 3714.0 16 3440.0 17 3069.5 18 2699.0 19 2722.5 20 2746.0 21 2548.5 22 2351.0 23 2391.5 24 2432.0 25 2450.0 26 2468.0 27 2914.5 28 3361.0 29 4310.5 30 5260.0 31 6396.5 32 7533.0 33 8574.0 34 9615.0 35 10213.0 36 10811.0 37 14730.0 38 18649.0 39 30077.0 40 41505.0 41 53240.0 42 64975.0 43 67625.5 44 70276.0 45 66299.5 46 62323.0 47 57093.5 48 51864.0 49 48331.5 50 44799.0 51 40479.5 52 36160.0 53 32513.0 54 28866.0 55 25678.0 56 22490.0 57 20556.0 58 18622.0 59 16641.5 60 14661.0 61 12984.5 62 11308.0 63 9076.0 64 6844.0 65 5493.0 66 4142.0 67 3507.5 68 2873.0 69 2468.5 70 2064.0 71 1523.0 72 982.0 73 771.5 74 561.0 75 393.5 76 226.0 77 162.5 78 99.0 79 73.5 80 48.0 81 32.5 82 17.0 83 14.5 84 12.0 85 6.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 584908.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.263628231532955 #Duplication Level Percentage of deduplicated Percentage of total 1 72.5002704504363 16.866193384445445 2 5.920212624602202 2.7545125110074715 3 2.7557718654809493 1.9232775650840048 4 1.9411448110685756 1.8063228491307446 5 1.4739669446563062 1.7144909513026405 6 1.2207648095583972 1.7039651212622804 7 1.083391153478298 1.764252631669555 8 0.9425115074998748 1.7540989851535016 9 0.8368576007304442 1.7521509695513127 >10 10.423649788150895 53.02865700550673 >50 0.8457211126598342 12.384415070549815 >100 0.05276467398844308 1.5838178836752177 >500 0.0014863288447448755 0.28422624175985783 >1k 0.0014863288447448755 0.6796188299014606 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1970 0.3368051043924857 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1961 0.33526640086988035 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 835 0.14275749348615507 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 809 0.13831234997640654 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00854835290336258 0.0 2 0.0 0.0 0.0 0.034535345729584825 0.0 3 0.0 0.0 0.0 0.048212710374964954 0.0 4 0.0 0.0 0.0 0.07317390085278369 0.0 5 0.0 0.0 0.0 0.11659953360186559 0.0 6 0.0 0.0 0.0 0.19165407209338906 0.0 7 0.0 0.0 0.0 0.24243128833936278 0.0 8 0.0 0.0 0.0 0.5170043835953688 0.0 9 0.0 0.0 0.0 0.6262523337003426 0.0 10 0.0 0.0 0.0 0.8237192857680182 0.0 11 0.0 0.0 0.0 0.9777606050866119 0.0 12 0.0 0.0 0.0 1.1340244961600798 0.0 13 0.0 0.0 0.0 1.1921532959029455 0.0 14 0.0 0.0 0.0 1.2145499805097555 0.0 15 0.0 0.0 0.0 1.2501111285877438 0.0 16 0.0 0.0 0.0 1.3362785258536385 0.0 17 0.0 0.0 0.0 1.4364652218810479 0.0 18 0.0 0.0 0.0 1.6041839058450218 0.0 19 0.0 0.0 0.0 1.6657320467492323 0.0 20 0.0 0.0 0.0 1.7245447147243669 0.0 21 0.0 0.0 0.0 1.8158411237322793 0.0 22 0.0 0.0 0.0 1.9006407845336362 0.0 23 0.0 0.0 0.0 2.0069822946514666 0.0 24 0.0 0.0 0.0 2.077933623749376 0.0 25 0.0 0.0 0.0 2.1278560047050132 0.0 26 0.0 0.0 0.0 2.191968651480233 0.0 27 0.0 0.0 0.0 2.251465187687636 0.0 28 0.0 0.0 0.0 2.310448822720838 0.0 29 0.0 0.0 0.0 2.3745614694960575 0.0 30 0.0 0.0 0.0 2.461070800878087 0.0 31 0.0 0.0 0.0 2.547409165202049 0.0 32 0.0 0.0 0.0 2.6204120989967654 0.0 33 0.0 0.0 0.0 2.6946118021979526 0.0 34 0.0 0.0 0.0 2.7718889124443504 0.0 35 0.0 0.0 0.0 2.8881465119300813 0.0 36 0.0 0.0 0.0 2.967988128047488 0.0 37 0.0 0.0 0.0 3.0500523159197686 0.0 38 0.0 0.0 0.0 3.1336552073146544 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 65 0.0 44.000004 28 CAGGTAT 20 7.8533095E-4 44.0 6 AACGTAG 20 7.8533095E-4 44.0 2 CGGGTCC 25 4.4401502E-5 44.0 24 CTATGCG 25 4.4401502E-5 44.0 25 CGGAACC 20 7.8533095E-4 44.0 29 AGTCCCG 20 7.8533095E-4 44.0 22 CAAACCG 20 7.8533095E-4 44.0 12 GTACAGC 25 4.4401502E-5 44.0 24 CGAAATC 20 7.8533095E-4 44.0 26 ACGTTAG 30 2.5255758E-6 44.0 2 TAGACGG 50 2.7284841E-11 44.0 2 AACCCCG 20 7.8533095E-4 44.0 11 CGTTGTG 20 7.8533095E-4 44.0 31 CTATACG 35 1.4444595E-7 44.0 1 GCTATAG 50 2.7284841E-11 44.0 2 ATAGCCG 20 7.8533095E-4 44.0 19 GCAAACG 25 4.4401502E-5 44.0 1 TTCGTCC 20 7.8533095E-4 44.0 30 TTACTAA 20 7.8533095E-4 44.0 1 >>END_MODULE