##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545765_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 226182 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.037704149755506 31.0 31.0 33.0 30.0 33.0 2 31.1898029020877 31.0 31.0 33.0 30.0 34.0 3 31.108713337047156 31.0 31.0 34.0 28.0 34.0 4 35.04923910832869 35.0 35.0 37.0 32.0 37.0 5 32.769981696156194 35.0 35.0 37.0 28.0 37.0 6 33.97702292843816 35.0 35.0 37.0 28.0 37.0 7 15.582305400076045 0.0 0.0 35.0 0.0 37.0 8 25.072322289129993 17.0 17.0 35.0 17.0 37.0 9 32.90479790611101 32.0 32.0 37.0 28.0 39.0 10 35.65945123838325 37.0 35.0 38.0 32.0 39.0 11 36.55975718669036 37.0 35.0 39.0 32.0 39.0 12 36.141540883005725 37.0 35.0 39.0 32.0 39.0 13 35.479016897896386 37.0 35.0 39.0 30.0 39.0 14 36.45963427682132 38.0 35.0 40.0 31.0 41.0 15 36.986877824053195 39.0 35.0 40.0 31.0 41.0 16 37.16127720154566 39.0 35.0 41.0 32.0 41.0 17 37.15818234872802 39.0 35.0 41.0 32.0 41.0 18 37.08146536859697 38.0 35.0 40.0 32.0 41.0 19 36.960770529927224 38.0 35.0 40.0 32.0 41.0 20 37.01848511375795 39.0 35.0 40.0 32.0 41.0 21 36.80938359374309 38.0 35.0 40.0 32.0 41.0 22 36.86779230884863 38.0 35.0 40.0 32.0 41.0 23 36.89996109327886 38.0 35.0 40.0 32.0 41.0 24 36.729514284956366 38.0 35.0 40.0 32.0 41.0 25 36.51325481249613 38.0 35.0 40.0 31.0 41.0 26 36.36270348657276 38.0 35.0 40.0 31.0 41.0 27 36.20849581310626 38.0 34.0 40.0 31.0 41.0 28 36.19440096913105 38.0 35.0 40.0 31.0 41.0 29 36.269119558585565 38.0 35.0 40.0 31.0 41.0 30 36.039782122361636 38.0 35.0 40.0 30.0 41.0 31 35.868212324588164 38.0 34.0 40.0 30.0 41.0 32 35.66572494716644 38.0 34.0 40.0 30.0 41.0 33 35.44547311457145 38.0 34.0 40.0 29.0 41.0 34 35.29644268774704 38.0 34.0 40.0 27.0 41.0 35 35.07631464926475 38.0 34.0 40.0 27.0 41.0 36 34.867650829862676 37.0 34.0 40.0 25.0 41.0 37 34.706789222838246 37.0 33.0 40.0 24.0 41.0 38 34.67262646894979 37.0 33.0 40.0 24.0 41.0 39 34.62821533101661 37.0 33.0 40.0 24.0 41.0 40 34.46091643013149 37.0 33.0 40.0 23.0 41.0 41 34.37407043885013 37.0 33.0 40.0 23.0 41.0 42 34.326896039472636 37.0 33.0 40.0 23.0 41.0 43 34.231508254414585 37.0 33.0 40.0 23.0 41.0 44 33.91270746566924 36.0 33.0 40.0 23.0 41.0 45 33.868163691186744 36.0 33.0 40.0 23.0 41.0 46 33.90061101237057 36.0 33.0 40.0 23.0 41.0 47 33.889650812177806 36.0 33.0 40.0 23.0 41.0 48 33.93229788400492 36.0 33.0 40.0 23.0 41.0 49 33.89194984569948 36.0 33.0 40.0 23.0 41.0 50 33.7300536735903 36.0 33.0 40.0 23.0 41.0 51 33.506481506043805 35.0 33.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 6.0 15 12.0 16 29.0 17 66.0 18 147.0 19 311.0 20 504.0 21 846.0 22 1231.0 23 1885.0 24 2717.0 25 3443.0 26 4304.0 27 4618.0 28 4971.0 29 5661.0 30 6776.0 31 8983.0 32 11894.0 33 19117.0 34 23958.0 35 22750.0 36 23915.0 37 36694.0 38 35327.0 39 6017.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.600940835256562 23.93028622967345 30.29286150091519 16.175911434154795 2 31.37738635258332 23.353317240098683 32.24571362884757 13.023582778470436 3 28.985065124545724 23.388686986586023 34.92320343793936 12.7030444509289 4 24.98828377147607 27.589286503788983 32.93498156351964 14.487448161215305 5 20.908825635992255 35.989159172701626 30.197805307230464 12.904209884075657 6 20.046245943532202 40.061985480719066 29.42630271197531 10.46546586377342 7 38.68787082968583 56.01153053735487 4.620615256740147 0.679983376219151 8 89.35237994181676 2.570496325967584 7.03902167281216 1.038102059403489 9 86.66825830525859 3.3203349514992353 7.999310289943497 2.0120964532986707 10 60.551237499005225 17.24805687455235 12.81003793405311 9.390667692389314 11 55.32270472451388 17.057502365351795 17.095082720994597 10.524710189139718 12 48.82484017295806 19.64391507723868 20.90794139233007 10.623303357473185 13 20.57148667886923 46.37725371603399 21.953117401031026 11.098142204065752 14 12.899346543933646 49.16394761740545 27.269632419909627 10.667073418751272 15 11.096373716741386 21.67944398758522 55.218363972376224 12.005818323297168 16 12.888735619987443 14.821692265520687 54.043204145334286 18.246367969157582 17 13.590825087761182 14.726636071835955 30.130602788904508 41.55193605149835 18 20.744356314826113 20.24299015836804 38.60519404727167 20.407459479534182 19 31.192137305355867 21.169677516336403 26.628555764826555 21.00962941348118 20 34.50274557657108 21.312040745947954 23.992183286026297 20.19303039145467 21 21.48048916359392 28.597324278678233 29.21585272037563 20.70633383735222 22 22.30769910956663 22.580930401181348 26.249215233749812 28.86215525550221 23 17.772413366227198 31.66697615194843 24.23446604946459 26.326144432359783 24 18.665057343201493 21.957096497510854 43.18203924273373 16.195806916553927 25 15.496370179766735 22.298856672944797 41.39277219230531 20.812000954983155 26 14.582946476731129 36.94679505884642 28.40765401313986 20.062604451282596 27 15.466748017083587 36.639520386237635 30.47413145166282 17.41960014501596 28 12.831701903776604 28.57433394346146 44.063630173930726 14.530333978831205 29 13.068679205241796 22.96469215056901 42.980431687755875 20.986196956433314 30 16.293073719394116 31.18727396521385 34.16894359409679 18.350708721295238 31 32.5392825246925 24.457737574165936 24.315816466385478 18.687163434756084 32 33.223687119222575 25.594874923733986 26.083861668921486 15.097576288121955 33 30.478110548142645 26.166980573166743 24.776507414383108 18.578401464307504 34 19.043955752447143 27.515452157996656 28.386874287078545 25.05371780247765 35 18.889655233396116 24.325543146669496 34.121194436338875 22.66360718359551 36 34.242335818058024 22.019435675694794 26.01179581045353 17.726432695793655 37 19.802636814600632 33.380640369260156 28.297565677198012 18.519157138941207 38 19.66248419414454 35.73714972897932 21.636116048138224 22.964250028737922 39 20.166945203420255 32.64981298246545 26.8734912592514 20.309750554862898 40 24.409546294576934 24.808340186221713 24.776507414383108 26.005606104818245 41 16.558788939880273 22.46597872509749 27.32666613612047 33.64856619890177 42 21.91597916721932 24.01517362124307 23.386918499261654 30.68192871227595 43 21.54769168191987 25.4060889018578 25.076708137694425 27.969511278527907 44 18.546126570637806 30.13016066707342 29.805643243052053 21.51806951923672 45 15.758548425604161 40.47360090546551 21.877072446083243 21.89077822284709 46 22.08840668134511 33.956282993341645 25.677551706148144 18.2777586191651 47 21.29126101988664 27.482293020664773 25.62317072092386 25.603275238524724 48 23.289209574590373 22.588888594141 31.986188113996693 22.135713717271933 49 21.007860926156813 21.63257907348949 34.38071995118975 22.97884004916395 50 19.226109946856955 34.92585616892591 26.130284461186125 19.717749423031012 51 18.247252212819763 36.837590966566744 22.564129771599863 22.351027049013627 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 210.5 2 247.0 3 1179.5 4 2112.0 5 1658.5 6 1205.0 7 1256.0 8 1307.0 9 1440.0 10 1573.0 11 1527.0 12 1481.0 13 1376.5 14 1272.0 15 1244.5 16 1217.0 17 1102.0 18 987.0 19 1001.5 20 1016.0 21 984.0 22 952.0 23 930.5 24 909.0 25 987.0 26 1088.5 27 1112.0 28 1495.5 29 1879.0 30 2306.5 31 2734.0 32 3175.5 33 3617.0 34 3823.0 35 4029.0 36 5072.0 37 6115.0 38 9735.5 39 13356.0 40 17872.5 41 22389.0 42 24278.5 43 26168.0 44 25411.0 45 24654.0 46 23038.0 47 21422.0 48 19531.5 49 17641.0 50 16273.0 51 14905.0 52 13713.0 53 12521.0 54 11222.0 55 9923.0 56 9047.0 57 8171.0 58 7185.5 59 6200.0 60 5545.0 61 4890.0 62 4138.0 63 3386.0 64 2745.0 65 2104.0 66 1654.0 67 1204.0 68 1077.5 69 951.0 70 796.0 71 641.0 72 493.0 73 345.0 74 260.5 75 120.0 76 64.0 77 49.5 78 35.0 79 25.5 80 16.0 81 12.0 82 8.0 83 7.5 84 7.0 85 4.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 226182.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.142619660273585 #Duplication Level Percentage of deduplicated Percentage of total 1 67.46262723775182 21.00962941348118 2 7.585286560002272 4.724513887046715 3 4.301594287255639 4.01888744462424 4 3.0366700265477933 3.7827943868212324 5 2.31973764533852 3.612135360019807 6 1.83563082951206 3.429981165609995 7 1.5744119024971963 3.4321917747654545 8 1.4225074177657262 3.544048598031674 9 1.2947372904214995 3.6289359896012945 >10 9.10433140731697 46.87729350699879 >50 0.055367055182498334 1.0473866178564166 >100 0.004259004244807563 0.33291773881210707 >500 0.002839336163205043 0.5592841163310962 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 720 0.3183277183860785 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 545 0.24095639794501772 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 497 0.21973455005261253 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006631827466376635 0.0 2 0.0 0.0 0.0 0.031832771838607846 0.0 3 0.0 0.0 0.0 0.04111733029153514 0.0 4 0.0 0.0 0.0 0.06985524931250055 0.0 5 0.0 0.0 0.0 0.12600472186115605 0.0 6 0.0 0.0 0.0 0.19276511835601418 0.0 7 0.0 0.0 0.0 0.23122971766099867 0.0 8 0.0 0.0 0.0 0.4558276078556207 0.0 9 0.0 0.0 0.0 0.542041364918517 0.0 10 0.0 0.0 0.0 0.7241955593283285 0.0 11 0.0 0.0 0.0 0.8586005959802283 0.0 12 0.0 0.0 0.0 0.9987532164363212 0.0 13 0.0 0.0 0.0 1.0451760087009576 0.0 14 0.0 0.0 0.0 1.0606502727891698 0.0 15 0.0 0.0 0.0 1.0889460699790434 0.0 16 0.0 0.0 0.0 1.1711807305621138 0.0 17 0.0 0.0 0.0 1.2542996348073676 0.0 18 0.0 0.0 0.0 1.4019683263920206 0.0 19 0.0 0.0 0.0 1.4559071897852172 0.0 20 0.0 0.0 0.0 1.5142672714893315 0.0 21 0.0 0.0 0.0 1.5947334447480348 0.0 22 0.0 0.0 0.0 1.671220521526912 0.0 23 0.0 0.0 0.0 1.7640661060561849 0.0 24 0.0 0.0 0.0 1.8241946750846663 0.0 25 0.0 0.0 0.0 1.867964736362752 0.0 26 0.0 0.0 0.0 1.9241142089114076 0.0 27 0.0 0.0 0.0 1.9692106356827688 0.0 28 0.0 0.0 0.0 2.017401915271772 0.0 29 0.0 0.0 0.0 2.0748777533137033 0.0 30 0.0 0.0 0.0 2.1575545357278654 0.0 31 0.0 0.0 0.0 2.237136465324385 0.0 32 0.0 0.0 0.0 2.297265034352866 0.0 33 0.0 0.0 0.0 2.362256943523357 0.0 34 0.0 0.0 0.0 2.435649167484592 0.0 35 0.0 0.0 0.0 2.552369330892821 0.0 36 0.0 0.0 0.0 2.6297406513338815 0.0 37 0.0 0.0 0.0 2.7049013626194833 0.0 38 0.0 0.0 0.0 2.774756611931984 0.0 39 0.0 0.0 0.0 2.8698128056167156 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTAGG 30 2.1577453E-6 45.000004 3 AGGACTA 30 2.1577453E-6 45.000004 7 AGGAACG 30 2.1577453E-6 45.000004 7 ACGGGAT 30 2.1577453E-6 45.000004 5 CTTGCTA 30 2.1577453E-6 45.000004 1 GCGATAT 30 2.1577453E-6 45.000004 9 TGGGCGA 75 0.0 45.000004 6 AAGGCGC 30 2.1577453E-6 45.000004 6 TCACGAC 55 1.8189894E-12 45.0 25 CTCACGA 55 1.8189894E-12 45.0 24 GTACCCA 20 7.02126E-4 45.0 28 AGATCGA 20 7.02126E-4 45.0 1 GATGTAG 25 3.8808397E-5 45.0 1 CATATAG 20 7.02126E-4 45.0 2 CACGGGC 20 7.02126E-4 45.0 4 CGACGGG 25 3.8808397E-5 45.0 3 CCTAGGA 20 7.02126E-4 45.0 4 CGGTTTA 20 7.02126E-4 45.0 1 TAGGTGA 20 7.02126E-4 45.0 6 TATGGGC 20 7.02126E-4 45.0 4 >>END_MODULE