SRR1545763_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545763_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	286009
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	763	0.2667748217713429	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	750	0.26222951026016666	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	630	0.22027278861853997	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	35	1.2076453E-7	45.000004	25
CTCACGT	35	1.2076453E-7	45.000004	45
CGACGGT	35	1.2076453E-7	45.000004	28
AACCCGA	25	3.883434E-5	45.000004	24
GAGTATA	25	3.883434E-5	45.000004	1
CAACCCG	25	3.883434E-5	45.000004	23
AACGGGA	50	2.1827873E-11	45.000004	4
GACGGTC	35	1.2076453E-7	45.000004	29
CGGTCTA	35	1.2076453E-7	45.000004	31
AATAGGC	35	1.2076453E-7	45.000004	4
ACGACGG	35	1.2076453E-7	45.000004	27
CTTCGGT	20	7.024392E-4	45.0	34
GGTAATC	40	6.7848305E-9	45.0	8
CGTATGG	20	7.024392E-4	45.0	2
CGCGGGT	20	7.024392E-4	45.0	29
AACTTCG	20	7.024392E-4	45.0	11
CACGACG	40	6.7848305E-9	45.0	26
CACGAAA	20	7.024392E-4	45.0	35
GTAATCC	20	7.024392E-4	45.0	9
CGGATCA	20	7.024392E-4	45.0	31