##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545763_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 286009 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.998807729826684 31.0 31.0 33.0 30.0 33.0 2 31.150512746102397 31.0 31.0 33.0 30.0 34.0 3 31.079829655710135 31.0 31.0 34.0 28.0 34.0 4 35.029485086133654 35.0 35.0 37.0 32.0 37.0 5 32.727907163760584 35.0 35.0 37.0 28.0 37.0 6 33.94446328612037 35.0 35.0 37.0 28.0 37.0 7 15.637724686985374 0.0 0.0 35.0 0.0 37.0 8 25.101818474243817 17.0 17.0 35.0 17.0 37.0 9 32.84364128401554 32.0 32.0 37.0 27.0 39.0 10 35.57019883989665 37.0 35.0 37.0 32.0 39.0 11 36.46517766923419 37.0 35.0 39.0 32.0 39.0 12 36.17979504141478 37.0 35.0 39.0 32.0 39.0 13 35.70500229013772 37.0 35.0 39.0 31.0 39.0 14 36.745347174389615 39.0 35.0 40.0 31.0 41.0 15 37.205972539325685 39.0 35.0 41.0 32.0 41.0 16 37.31029792768759 39.0 35.0 41.0 32.0 41.0 17 37.28706089668507 39.0 35.0 41.0 32.0 41.0 18 37.1940638231664 39.0 35.0 40.0 32.0 41.0 19 37.09698645846809 39.0 35.0 40.0 32.0 41.0 20 37.17898737452318 39.0 35.0 40.0 32.0 41.0 21 36.97963700442993 39.0 35.0 40.0 32.0 41.0 22 37.04591813544329 39.0 35.0 40.0 32.0 41.0 23 37.04375386788528 39.0 35.0 40.0 32.0 41.0 24 36.86351478449979 38.0 35.0 40.0 32.0 41.0 25 36.62187553538525 38.0 35.0 40.0 31.0 41.0 26 36.499942309507745 38.0 35.0 40.0 31.0 41.0 27 36.37530287508435 38.0 35.0 40.0 31.0 41.0 28 36.34712194371506 38.0 35.0 40.0 31.0 41.0 29 36.39021499323448 38.0 35.0 40.0 31.0 41.0 30 36.14257593292519 38.0 35.0 40.0 30.0 41.0 31 35.98660531661591 38.0 34.0 40.0 30.0 41.0 32 35.829064819638546 38.0 34.0 40.0 30.0 41.0 33 35.58980661447717 38.0 34.0 40.0 29.0 41.0 34 35.43902464607757 38.0 34.0 40.0 27.0 41.0 35 35.258313549573614 38.0 34.0 40.0 27.0 41.0 36 35.020796548360366 38.0 34.0 40.0 25.0 41.0 37 34.86778388092682 38.0 34.0 40.0 25.0 41.0 38 34.80748158274739 38.0 34.0 40.0 24.0 41.0 39 34.749182718026354 38.0 34.0 40.0 24.0 41.0 40 34.59442884664469 37.0 33.0 40.0 23.0 41.0 41 34.472205420109155 37.0 33.0 40.0 23.0 41.0 42 34.434014314234865 37.0 33.0 40.0 23.0 41.0 43 34.34203119482254 37.0 33.0 40.0 23.0 41.0 44 34.12356254523459 37.0 33.0 40.0 23.0 41.0 45 34.02771591103777 37.0 33.0 40.0 23.0 41.0 46 34.02910747563888 37.0 33.0 40.0 23.0 41.0 47 33.98619274218643 36.0 33.0 40.0 23.0 41.0 48 33.99710498620673 36.0 33.0 40.0 23.0 41.0 49 33.92642539220794 36.0 33.0 40.0 23.0 41.0 50 33.78371659633088 36.0 33.0 40.0 23.0 41.0 51 33.545094734781074 36.0 33.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 6.0 14 0.0 15 14.0 16 30.0 17 75.0 18 199.0 19 359.0 20 665.0 21 1046.0 22 1571.0 23 2433.0 24 3342.0 25 4633.0 26 5255.0 27 5611.0 28 5968.0 29 6908.0 30 8356.0 31 11090.0 32 14491.0 33 22151.0 34 28647.0 35 28536.0 36 31547.0 37 48147.0 38 46162.0 39 8765.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.978364317206804 23.576880447818073 29.16027118027754 15.28448405469758 2 31.7615879220584 23.287728707837864 32.20702845015367 12.743654919950071 3 28.985451506770765 22.911167131104264 35.430353590271636 12.673027771853334 4 25.389061183389334 27.43689883884773 32.396532976235015 14.777507001527923 5 20.83186193441465 36.46318822134968 29.78192993926764 12.923019904968026 6 19.824201336321583 40.61795258191176 28.983004031341668 10.574842050424985 7 39.031289225164244 55.86397630843785 4.418742067557314 0.6859923988405959 8 88.75629787873808 2.697817201556594 7.264806352247656 1.2810785674576675 9 85.21095490002062 3.8673608173169374 8.658119150096676 2.263565132565758 10 54.151093147418436 23.235282805785832 13.734532829386486 8.879091217409242 11 49.113489435647125 18.843113328601547 20.8486446230713 11.19475261268002 12 44.82656140191393 20.54585694855756 23.423388774479125 11.204192875049387 13 20.309151110629386 43.989175165816455 23.508001496456405 12.193672227097748 14 13.710058075095539 45.34158016006489 27.269421591628234 13.678940173211332 15 11.58320192721208 22.91151677045128 52.17737903352692 13.327902268809721 16 14.054452831903891 15.997049043911204 50.65295148054781 19.29554664363709 17 14.658979262890329 16.466614686950408 29.918289284602935 38.95611676555633 18 19.744133925855483 21.183599117510287 38.19530154645483 20.876965410179398 19 29.584034068857974 23.121999657353438 26.48238342150072 20.811582852287867 20 32.827987930449744 21.32345485631571 25.525420528724617 20.32313668450993 21 21.01262547682066 28.877063309196565 28.975311965707373 21.134999248275406 22 22.151051190696798 23.53772084095256 25.683107874227733 28.62812009412291 23 17.650493515938308 31.519287854578003 25.411787740945215 25.418430888538474 24 18.440328800841932 22.224125814222628 43.35632794772192 15.979217437213514 25 16.11382858581373 23.971972909943393 39.110657356936315 20.803541147306554 26 15.76174176337108 35.52195909918919 27.78828638259635 20.92801275484338 27 15.81558622281117 35.9712456601016 29.39278134604156 18.820386771045666 28 13.389438793884109 27.608222118884374 42.047977511197196 16.954361576034323 29 13.796069354460874 22.6901950637917 40.98332569954092 22.530409882206502 30 16.686537836221937 32.04409651444535 32.97833284966557 18.291032799667143 31 29.89031813684185 26.303717715176795 24.84222524466013 18.96373890332122 32 30.338905419060243 24.79572321150733 26.790765325566678 18.074606043865753 33 28.227433402445378 27.630948676440255 24.956557311133565 19.185060609980805 34 18.528088276942334 26.94705411368174 28.19351838578506 26.331339223590867 35 18.95359936225783 24.734186686432942 33.38741088567143 22.924803065637793 36 31.246569163907427 23.81428556444028 26.411756273403984 18.527388998248306 37 19.2004447412494 33.581111083916944 29.128104360352296 18.090339814481364 38 19.04975018268656 33.15070504774325 25.655136726466647 22.14440804310354 39 19.02947110055977 32.7881290448902 27.149495295602588 21.032904558947447 40 24.74677370292543 25.60513829984371 25.359691478240194 24.28839651899066 41 16.650874622826553 23.917079532462264 27.873248743920648 31.558797100790535 42 20.93955085329483 25.504092528556793 24.062529500819902 29.493827117328475 43 21.85945197528749 26.36105856808702 25.3341678059082 26.445321650717286 44 18.850106115541816 30.021432891971934 29.42949347747798 21.69896751500827 45 16.535493638312083 39.74420385372488 22.187064043439193 21.533238464523844 46 21.68742941655682 33.74194518354317 25.81876794086899 18.75185745903101 47 20.58186980129996 28.427077469590117 26.37294630588548 24.618106423224447 48 21.9370719103245 24.030362680894658 31.5734819533651 22.459083455415737 49 20.42278389840879 23.447164250076046 33.7349523966029 22.395099454912256 50 19.23890506942089 33.28776367177257 26.671887947582068 20.80144331122447 51 16.983381641836445 35.2642749004402 24.295039666583918 23.457303791139438 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 181.0 1 234.0 2 287.0 3 1489.0 4 2691.0 5 2051.5 6 1412.0 7 1537.0 8 1662.0 9 1713.0 10 1764.0 11 1801.0 12 1838.0 13 1731.0 14 1624.0 15 1569.0 16 1514.0 17 1382.0 18 1250.0 19 1220.0 20 1190.0 21 1287.5 22 1385.0 23 1392.0 24 1399.0 25 1616.5 26 2011.5 27 2189.0 28 2766.0 29 3343.0 30 3945.5 31 4548.0 32 5540.5 33 6533.0 34 7257.0 35 7981.0 36 9183.0 37 10385.0 38 13674.5 39 16964.0 40 21906.0 41 26848.0 42 29268.5 43 31689.0 44 30005.0 45 28321.0 46 26524.5 47 24728.0 48 23278.5 49 21829.0 50 20384.0 51 18939.0 52 16782.0 53 14625.0 54 12905.0 55 11185.0 56 9959.5 57 8734.0 58 8235.0 59 7736.0 60 6933.0 61 6130.0 62 5261.5 63 4393.0 64 3758.5 65 3124.0 66 2633.5 67 2143.0 68 1763.0 69 1383.0 70 1187.5 71 992.0 72 810.0 73 628.0 74 454.5 75 220.5 76 160.0 77 122.5 78 85.0 79 65.0 80 45.0 81 28.5 82 12.0 83 11.0 84 10.0 85 8.5 86 7.0 87 6.5 88 6.0 89 3.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 286009.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.75383292134163 #Duplication Level Percentage of deduplicated Percentage of total 1 68.65101150830235 23.17234772332339 2 8.301308279555412 5.604019453933268 3 4.442764064264184 4.498809478023419 4 3.0122541149172877 4.067004884461678 5 2.3389510974839185 3.9474282277830417 6 1.7474802929386053 3.539049470471209 7 1.4936968479060275 3.529259568754829 8 1.233698298097142 3.331363698345157 9 1.0317073928671314 3.1341671066295116 >10 7.680833652720661 43.017877059812804 >50 0.0590434953749262 1.234226894957851 >100 0.0041434031842053475 0.1751693128537913 >500 0.00310755238815401 0.7492771206500495 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 763 0.2667748217713429 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 750 0.26222951026016666 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 630 0.22027278861853997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007692065634298221 0.0 2 0.0 0.0 0.0 0.043355279029680886 0.0 3 0.0 0.0 0.0 0.0541940987871011 0.0 4 0.0 0.0 0.0 0.08216524654818555 0.0 5 0.0 0.0 0.0 0.1374082633763273 0.0 6 0.0 0.0 0.0 0.20488865734994352 0.0 7 0.0 0.0 0.0 0.25034177246170575 0.0 8 0.0 0.0 0.0 0.5297036107255366 0.0 9 0.0 0.0 0.0 0.6531263002213217 0.0 10 0.0 0.0 0.0 0.8527703673660619 0.0 11 0.0 0.0 0.0 1.0104577128691754 0.0 12 0.0 0.0 0.0 1.1566069599208417 0.0 13 0.0 0.0 0.0 1.2149967308721055 0.0 14 0.0 0.0 0.0 1.2356254523459052 0.0 15 0.0 0.0 0.0 1.2803792887636403 0.0 16 0.0 0.0 0.0 1.3688380435580698 0.0 17 0.0 0.0 0.0 1.47407948700915 0.0 18 0.0 0.0 0.0 1.6506473572509957 0.0 19 0.0 0.0 0.0 1.7170788331835711 0.0 20 0.0 0.0 0.0 1.779314636951984 0.0 21 0.0 0.0 0.0 1.8698712278284948 0.0 22 0.0 0.0 0.0 1.9513371956826533 0.0 23 0.0 0.0 0.0 2.0740606064844114 0.0 24 0.0 0.0 0.0 2.1618200825848137 0.0 25 0.0 0.0 0.0 2.227552279823362 0.0 26 0.0 0.0 0.0 2.307270050942453 0.0 27 0.0 0.0 0.0 2.368456936669825 0.0 28 0.0 0.0 0.0 2.4380351667255225 0.0 29 0.0 0.0 0.0 2.5170536591505863 0.0 30 0.0 0.0 0.0 2.6153023156613955 0.0 31 0.0 0.0 0.0 2.718795562377408 0.0 32 0.0 0.0 0.0 2.7999118908845526 0.0 33 0.0 0.0 0.0 2.888370645678982 0.0 34 0.0 0.0 0.0 2.9785775972084796 0.0 35 0.0 0.0 0.0 3.1114405490736305 0.0 36 0.0 0.0 0.0 3.2128359597075615 0.0 37 0.0 0.0 0.0 3.3215737966287775 0.0 38 0.0 0.0 0.0 3.421920289221668 0.0 39 0.0 0.0 0.0 3.508281207934016 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 35 1.2076453E-7 45.000004 25 CTCACGT 35 1.2076453E-7 45.000004 45 CGACGGT 35 1.2076453E-7 45.000004 28 AACCCGA 25 3.883434E-5 45.000004 24 GAGTATA 25 3.883434E-5 45.000004 1 CAACCCG 25 3.883434E-5 45.000004 23 AACGGGA 50 2.1827873E-11 45.000004 4 GACGGTC 35 1.2076453E-7 45.000004 29 CGGTCTA 35 1.2076453E-7 45.000004 31 AATAGGC 35 1.2076453E-7 45.000004 4 ACGACGG 35 1.2076453E-7 45.000004 27 CTTCGGT 20 7.024392E-4 45.0 34 GGTAATC 40 6.7848305E-9 45.0 8 CGTATGG 20 7.024392E-4 45.0 2 CGCGGGT 20 7.024392E-4 45.0 29 AACTTCG 20 7.024392E-4 45.0 11 CACGACG 40 6.7848305E-9 45.0 26 CACGAAA 20 7.024392E-4 45.0 35 GTAATCC 20 7.024392E-4 45.0 9 CGGATCA 20 7.024392E-4 45.0 31 >>END_MODULE