##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545762_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1654012 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.476065469899854 31.0 31.0 33.0 30.0 34.0 2 31.67104289448928 31.0 31.0 34.0 30.0 34.0 3 31.72155280614651 31.0 31.0 34.0 30.0 34.0 4 35.643057003214004 37.0 35.0 37.0 33.0 37.0 5 26.99315240760043 35.0 22.0 37.0 0.0 37.0 6 31.269838429225423 35.0 25.0 37.0 17.0 37.0 7 15.134691888571545 0.0 0.0 32.0 0.0 37.0 8 25.153931773167304 17.0 17.0 35.0 17.0 37.0 9 33.1191025216262 32.0 32.0 37.0 28.0 39.0 10 35.929042231858055 37.0 35.0 39.0 32.0 39.0 11 36.93528583831314 38.0 37.0 39.0 34.0 39.0 12 37.07755385087896 39.0 37.0 39.0 34.0 39.0 13 36.719917388749295 39.0 35.0 39.0 33.0 39.0 14 38.04948271233824 40.0 37.0 41.0 33.0 41.0 15 38.28181355395245 40.0 37.0 41.0 33.0 41.0 16 38.30842158339843 40.0 37.0 41.0 34.0 41.0 17 38.32261313702682 40.0 37.0 41.0 34.0 41.0 18 38.28986065397349 40.0 37.0 41.0 34.0 41.0 19 38.24427634140502 40.0 37.0 41.0 34.0 41.0 20 38.28602452702882 40.0 37.0 41.0 34.0 41.0 21 38.164187442412754 40.0 37.0 41.0 34.0 41.0 22 38.06934713895667 40.0 36.0 41.0 34.0 41.0 23 37.96530980428195 40.0 36.0 41.0 34.0 41.0 24 37.80395003180146 40.0 35.0 41.0 33.0 41.0 25 37.62570465026856 39.0 35.0 41.0 33.0 41.0 26 37.37612907282414 39.0 35.0 40.0 33.0 41.0 27 37.19136983286699 39.0 35.0 40.0 33.0 41.0 28 37.18777312377419 39.0 35.0 40.0 32.0 41.0 29 37.08643468124778 39.0 35.0 40.0 32.0 41.0 30 36.88668340979388 39.0 35.0 40.0 32.0 41.0 31 36.732370139998984 39.0 35.0 40.0 31.0 41.0 32 36.54193198114645 39.0 35.0 40.0 31.0 41.0 33 36.33834276897628 38.0 35.0 40.0 30.0 41.0 34 36.07277395810913 38.0 35.0 40.0 30.0 41.0 35 35.87106320873126 38.0 35.0 40.0 29.0 41.0 36 35.69816180293734 38.0 35.0 40.0 29.0 41.0 37 35.585444361951424 38.0 35.0 40.0 28.0 41.0 38 35.3879597004133 38.0 34.0 40.0 27.0 41.0 39 35.29788236119206 38.0 34.0 40.0 27.0 41.0 40 35.054634428287095 38.0 34.0 40.0 26.0 41.0 41 34.83144015883803 38.0 34.0 40.0 25.0 41.0 42 34.817364686592356 38.0 34.0 40.0 25.0 41.0 43 34.692515531930844 37.0 34.0 40.0 25.0 41.0 44 34.474412519377125 37.0 34.0 40.0 24.0 40.0 45 34.28737336851244 37.0 33.0 40.0 24.0 40.0 46 34.21385032273043 37.0 33.0 40.0 24.0 40.0 47 34.03499611852877 36.0 33.0 39.0 23.0 40.0 48 33.89781815367724 36.0 33.0 39.0 23.0 40.0 49 33.756062229294585 36.0 33.0 39.0 24.0 40.0 50 33.84603981107755 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 3.0 12 5.0 13 7.0 14 12.0 15 41.0 16 114.0 17 278.0 18 604.0 19 1233.0 20 2262.0 21 3864.0 22 5944.0 23 9189.0 24 14057.0 25 20174.0 26 25840.0 27 28449.0 28 29824.0 29 33439.0 30 40500.0 31 52252.0 32 71285.0 33 116266.0 34 131499.0 35 171227.0 36 241553.0 37 422237.0 38 182121.0 39 49731.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.83643891338152 22.443247086478213 26.552044362435094 15.168269637705167 2 36.249011494475255 23.159142738988592 28.150763114173294 12.44108265236286 3 31.91814811500763 23.552005668640856 31.661559891947576 12.868286324403936 4 28.48479938476867 25.693465343661355 30.017315472922807 15.804419798647167 5 17.35966849091784 48.225284943519156 22.63562779471975 11.77941877084326 6 20.68564194213827 41.02279789989432 28.55728978991688 9.734270368050533 7 39.25322186296109 55.36332263611147 4.271734425143228 1.1117210757842144 8 85.4918827674769 3.351184876530521 8.88723902849556 2.2696933274970195 9 80.51616312336307 5.299115121292953 10.58232951151503 3.6023922438289446 10 42.566740749160225 26.324718321269735 16.92279137031654 14.1857495592535 11 36.222288592827624 24.275095948517908 23.469116306290402 16.03349915236407 12 32.3579877292305 22.000203142419764 29.068047873896923 16.57376125445281 13 23.833442562689992 28.874397525531858 29.52390913729767 17.768250774480478 14 19.337707344323984 32.97648384655009 30.744093755063446 16.941715054062488 15 18.552646534607973 24.19166245468594 39.31017429135943 17.945516719346656 16 20.968469394417937 19.79344768961773 39.16283557797646 20.075247337987875 17 21.010246600387422 20.132925275028235 30.664227345388063 28.19260077919628 18 23.198320205657517 23.34384514743545 32.54256921957035 20.91526542733668 19 27.726098722379284 24.727934259243582 27.24393777070541 20.302029247671722 20 29.018531909079258 24.175338510240554 25.771457522678194 21.034672058001995 21 25.6912283586818 25.51384149570862 28.98020086915935 19.814729276450233 22 24.233258283494923 22.89064408238876 28.081658416021167 24.794439218095153 23 22.441614692033674 27.42773329334975 27.021508912873664 23.109143101742912 24 22.079888174934645 25.921335516308226 32.505870574094985 19.49290573466214 25 22.95334012086974 23.60732570259466 31.595054933096012 21.844279243439587 26 20.346708488209273 28.351970844226038 28.16926358454473 23.132057083019955 27 21.55552680391678 26.910143336324044 30.226201502770234 21.308128356988945 28 20.299187672157153 26.21831038710723 34.06643966307379 19.41606227766183 29 21.024031264585748 25.98856598380181 32.72908539962226 20.25831735199019 30 22.710657480115017 25.514990217725142 31.140826064139798 20.63352623802004 31 27.730995905712895 24.719893205127896 26.752828879113334 20.79628201004588 32 26.942307552786797 25.73663310786137 27.345871734908815 19.975187604443015 33 26.170124521466594 25.190627395689997 27.39442035487046 21.244827727972954 34 21.852985347143793 26.531246448030604 29.294285652099262 22.32148255272634 35 22.54747849471467 24.50967707610344 29.71622938648571 23.22661504269618 36 27.499316812695433 24.99873035987647 26.610568726224475 20.89138410120362 37 22.73266457558954 28.790540818325383 27.055245064727462 21.42154954135762 38 23.179154685697565 29.080200143650707 24.844982986822345 22.89566218382938 39 22.790342512629895 26.49563606551827 26.32211858196918 24.39190283988266 40 23.82642931248383 24.599700606767062 27.76666674727874 23.807203333470373 41 21.108794857594745 24.367840136589095 28.22216525635848 26.30119974945768 42 23.12298822499474 27.363223483263727 24.99613062057591 24.517657671165626 43 22.604733218380517 26.276411537522097 26.426531367366135 24.692323876731244 44 22.39475892557007 27.152523681811257 28.63969547983932 21.81302191277935 45 21.549359980459634 29.03255840949159 26.423085201316553 22.99499640873222 46 23.61240426308878 27.54163815014643 27.774163669912916 21.07179391685187 47 23.49656471658005 26.84738683878956 27.468603613516713 22.18744483111368 48 22.385448231330848 26.65004848816091 28.461945862545136 22.50255741796311 49 22.49445590479392 25.392076961956743 29.69343632331567 22.420030809933664 50 21.18787529957461 27.769266486579298 28.507592447938706 22.53526576590738 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 718.0 1 1686.5 2 2655.0 3 12897.0 4 23139.0 5 16620.0 6 10101.0 7 9960.0 8 9819.0 9 9881.0 10 9943.0 11 9690.0 12 9437.0 13 9196.5 14 8956.0 15 8569.5 16 8183.0 17 7932.5 18 7682.0 19 7498.5 20 7315.0 21 7563.0 22 7811.0 23 8776.0 24 9741.0 25 11340.5 26 12940.0 27 15455.5 28 17971.0 29 20549.5 30 23128.0 31 26637.0 32 30146.0 33 33041.0 34 35936.0 35 38890.5 36 41845.0 37 47801.0 38 53757.0 39 67308.0 40 80859.0 41 92649.5 42 104440.0 43 113792.0 44 123144.0 45 127922.0 46 132700.0 47 134158.0 48 135616.0 49 131047.5 50 126479.0 51 118406.0 52 110333.0 53 102425.0 54 94517.0 55 90809.0 56 87101.0 57 83925.0 58 80749.0 59 75414.0 60 70079.0 61 62097.5 62 54116.0 63 47260.5 64 40405.0 65 34380.0 66 28355.0 67 24458.0 68 20561.0 69 17481.0 70 14401.0 71 11824.5 72 9248.0 73 7070.0 74 4892.0 75 3653.0 76 2414.0 77 1836.0 78 1258.0 79 946.5 80 635.0 81 462.0 82 289.0 83 210.5 84 132.0 85 81.0 86 30.0 87 24.5 88 19.0 89 12.5 90 6.0 91 5.5 92 5.0 93 4.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1654012.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.00342304673563 #Duplication Level Percentage of deduplicated Percentage of total 1 72.40745768609916 20.276566693224442 2 7.072529486880247 3.961100704632393 3 3.4627863734788837 2.9090961521100196 4 2.2948176627961376 2.570509993056054 5 1.7627593761212197 2.468164826956114 6 1.3472938276592037 2.2637303414517844 7 1.1343952723887072 2.223686550044251 8 0.9599041421645976 2.150448142187927 9 0.8597841579089195 2.1669209552524342 >10 8.223407246027485 47.398110064122235 >50 0.42231742712969333 7.366296587964216 >100 0.046317501969315514 2.239343024282264 >500 0.005417251631756422 1.0486372353083224 >1k 5.417251631756422E-4 0.3882802175438193 >5k 2.708625815878211E-4 0.5691085118638946 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7503 0.45362427842119646 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3219 0.1946176932210891 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1900 0.11487220165270869 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0074364635806753515 0.0 2 0.0 0.0 0.0 0.026057852059114445 0.0 3 0.0 0.0 0.0 0.036094054940351096 0.0 4 0.0 0.0 0.0 0.053143508027753125 0.0 5 0.0 0.0 0.0 0.08972123539611562 0.0 6 0.0 0.0 0.0 0.18554883519587523 0.0 7 0.0 0.0 0.0 0.2518724168869392 0.0 8 0.0 0.0 0.0 0.6350014389254733 0.0 9 0.0 0.0 0.0 0.816197222269246 0.0 10 0.0 0.0 0.0 1.0888675535606755 0.0 11 0.0 0.0 0.0 1.2736908801145337 0.0 12 0.0 0.0 0.0 1.447873413252141 0.0 13 0.0 0.0 0.0 1.5253819198409686 0.0 14 0.0 0.0 0.0 1.5577275134642312 0.0 15 0.0 0.0 0.0 1.5968445210796536 0.0 16 0.0 0.0 0.0 1.6858402478337522 0.0 17 0.0 7.255086420171075E-4 0.0 1.78880201594668 0.0 18 0.0 7.255086420171075E-4 0.0 1.9431539795358195 0.0 19 0.0 7.255086420171075E-4 0.0 2.007845166782345 0.0 20 0.0 7.255086420171075E-4 0.0 2.0840840332476427 0.0 21 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.180093010207907 0.0 22 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.28118054766229 0.0 23 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.3947226501379677 0.0 24 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.4816627690730177 0.0 25 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.552278943562683 0.0 26 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.6300897454190175 0.0 27 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.7032452001557425 0.0 28 6.0459053501425626E-5 7.255086420171075E-4 0.0 2.7861950215596987 0.0 29 1.2091810700285125E-4 7.255086420171075E-4 0.0 2.8776695695073555 0.0 30 1.2091810700285125E-4 7.255086420171075E-4 0.0 2.996108855316648 0.0 31 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.09882878721557 0.0 32 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.201065046686481 0.0 33 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.3089844571865257 0.0 34 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.4158760637770462 0.0 35 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.5445933886815815 0.0 36 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.654024275519162 0.0 37 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.7647852615337736 0.0 38 1.2091810700285125E-4 7.255086420171075E-4 0.0 3.8987020650394313 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGAA 30 2.5283935E-6 44.000004 1 CTTAACG 20 7.857486E-4 44.0 1 TAGCGAT 25 4.44369E-5 44.0 6 CGTTTTA 3930 0.0 43.160305 1 CGGTCTA 430 0.0 41.953487 31 CGTTATT 2120 0.0 41.40566 1 TTTACGG 170 0.0 40.11765 2 CGACGGT 450 0.0 40.08889 28 ACGGTCT 450 0.0 40.08889 30 AGGCGAT 1395 0.0 40.057346 7 GTTTTAT 4735 0.0 39.44667 2 CGCATCG 140 0.0 39.285713 21 CACGACG 460 0.0 39.217392 26 TCACGAC 470 0.0 38.851067 25 TTACTGG 2750 0.0 38.8 40 GCGCGAC 1190 0.0 38.638657 9 GTTATTT 2450 0.0 38.612244 2 GGCGTAA 40 4.1259955E-7 38.5 1 TGATTCG 115 0.0 38.26087 15 TCAGACG 1255 0.0 38.03984 22 >>END_MODULE