##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545761_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 637377 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.938017845011665 31.0 31.0 33.0 30.0 33.0 2 31.109652529036975 31.0 31.0 33.0 30.0 34.0 3 31.037751597563137 31.0 31.0 34.0 28.0 34.0 4 35.037699822867786 35.0 35.0 37.0 32.0 37.0 5 32.711178784298774 35.0 35.0 37.0 28.0 37.0 6 33.91845171695872 35.0 35.0 37.0 28.0 37.0 7 15.751981951027414 0.0 0.0 35.0 0.0 37.0 8 25.11848874371055 17.0 17.0 35.0 17.0 37.0 9 32.658158358396996 32.0 32.0 37.0 27.0 39.0 10 35.37806510118815 37.0 34.0 37.0 32.0 39.0 11 36.35101674519162 37.0 35.0 39.0 32.0 39.0 12 36.350947712264485 37.0 35.0 39.0 32.0 39.0 13 36.21816444584602 38.0 35.0 39.0 32.0 39.0 14 37.25016748329482 39.0 36.0 40.0 32.0 41.0 15 37.517006418493295 39.0 36.0 41.0 32.0 41.0 16 37.47395340591204 39.0 36.0 41.0 32.0 41.0 17 37.41469020689482 39.0 36.0 41.0 32.0 41.0 18 37.33304621911365 39.0 36.0 40.0 32.0 41.0 19 37.29353585083867 39.0 36.0 40.0 32.0 41.0 20 37.41910831423161 39.0 36.0 40.0 32.0 41.0 21 37.2915291891612 39.0 35.0 40.0 32.0 41.0 22 37.33621859590164 39.0 35.0 41.0 32.0 41.0 23 37.29644150949909 39.0 35.0 40.0 32.0 41.0 24 37.09869825864441 39.0 35.0 40.0 32.0 41.0 25 36.84394322355529 39.0 35.0 40.0 31.0 41.0 26 36.72909439782107 39.0 35.0 40.0 31.0 41.0 27 36.664018312552855 38.0 35.0 40.0 31.0 41.0 28 36.539766888356496 38.0 35.0 40.0 31.0 41.0 29 36.47985885904261 38.0 35.0 40.0 30.0 41.0 30 36.19922118306748 38.0 35.0 40.0 30.0 41.0 31 36.08623153957548 38.0 35.0 40.0 30.0 41.0 32 35.99973798866291 38.0 35.0 40.0 30.0 41.0 33 35.81963265069182 38.0 35.0 40.0 29.0 41.0 34 35.63407998719753 38.0 34.0 40.0 27.0 41.0 35 35.44543025556303 38.0 34.0 40.0 26.0 41.0 36 35.25962656324279 38.0 34.0 40.0 25.0 41.0 37 35.119497565804856 38.0 34.0 40.0 25.0 41.0 38 34.960174276762416 38.0 34.0 40.0 24.0 41.0 39 34.83095091288202 38.0 34.0 40.0 24.0 41.0 40 34.68947891122522 38.0 33.0 40.0 23.0 41.0 41 34.504081571817 38.0 33.0 40.0 23.0 41.0 42 34.447587534536076 38.0 33.0 40.0 23.0 41.0 43 34.36070488894328 37.0 33.0 40.0 23.0 41.0 44 34.14093856540164 37.0 33.0 40.0 23.0 41.0 45 34.062211218792015 37.0 33.0 40.0 23.0 41.0 46 34.029210341760056 37.0 33.0 40.0 23.0 41.0 47 33.946714424900804 37.0 33.0 40.0 23.0 41.0 48 33.83976516253332 37.0 33.0 40.0 22.0 41.0 49 33.71309758588716 36.0 33.0 40.0 22.0 41.0 50 33.598666095576085 36.0 32.0 40.0 21.0 41.0 51 33.425446792086944 36.0 32.0 40.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 14.0 15 36.0 16 89.0 17 224.0 18 448.0 19 837.0 20 1432.0 21 2280.0 22 3480.0 23 5219.0 24 7194.0 25 9705.0 26 11422.0 27 12724.0 28 13803.0 29 15592.0 30 19050.0 31 23650.0 32 30679.0 33 43107.0 34 55473.0 35 63721.0 36 79591.0 37 116552.0 38 98427.0 39 22626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.52183401660242 23.28951311390276 26.62678446194325 14.561868407551575 2 36.15521112308728 22.840014622429113 28.582769695172562 12.422004559311052 3 32.56565580496316 23.168548598396242 31.187821336508847 13.077974260131759 4 29.15213445103918 26.317862113003766 28.581828337075233 15.948175098881823 5 21.356904940090402 36.56062267700278 27.528291733150084 14.554180649756738 6 20.63174541911616 41.83583656140714 28.09702891695182 9.43538910252488 7 39.00752615798813 55.57276148966781 4.558840372338506 0.860871980005554 8 85.92685333797738 3.649488450320611 8.243472858292659 2.180185353409364 9 80.9362433849982 5.440108444452812 9.931641712832437 3.692006457716548 10 42.31969462343323 27.201954259410048 16.336642207045436 14.141708910111284 11 36.37580270389424 24.838988542103024 22.938072757567344 15.84713599643539 12 32.638297271473554 22.462059346352316 28.50918687056483 16.3904565116093 13 23.980156171308348 29.54373941952722 28.799282057557775 17.676822351606663 14 19.46320623430089 33.742824105670586 30.108083598874764 16.68588606115376 15 18.541930443050187 24.743911374272997 38.89707347456843 17.81708470810839 16 20.92984214993638 20.328157432728197 38.74598549994744 19.99601491738798 17 20.89752218859482 20.541218148756542 30.22434132389465 28.336918338753986 18 23.172157137769325 23.796277556297138 32.22143252737391 20.810132778559627 19 28.053883337490998 24.98081982876696 26.714016978962213 20.251279854779824 20 29.378687966462547 24.536655699844832 25.163913978697067 20.920742354995554 21 25.853772571021544 26.072324542617636 28.415678632897013 19.658224253463803 22 24.256915451922488 23.31744007079013 27.443883290423095 24.98176118686429 23 22.456881876817018 28.02862356187939 26.386110575059973 23.12838398624362 24 21.962355089687893 26.44776953043489 32.278855371310854 19.31102000856636 25 23.005536754542444 23.97670452495148 31.341890278438033 21.67586844206804 26 20.32690228859843 28.884004286317204 27.720014998972353 23.069078426112018 27 21.54690238273424 27.686596786517242 29.66831247440683 21.098188356341694 28 20.258496933526 26.85004322402597 33.71066103734525 19.18079880510279 29 20.93235243819592 26.53986573095672 32.47057863713312 20.057203193714237 30 22.578944643437087 26.11719594525689 30.876388699309825 20.427470711996197 31 28.112875111590157 25.07354360135367 26.32209822444174 20.491483062614435 32 27.28369552086128 26.049575055265567 26.97116463254871 19.695564791324443 33 26.446357493288904 25.457147026014432 26.895071519681444 21.201423961015223 34 21.8586488059657 26.766733032412525 28.847918892586332 22.52669926903544 35 22.596359768237637 24.64773595532942 29.56994055323615 23.18596372319679 36 27.93856697056844 25.302607405036582 26.182149653972452 20.576675970422528 37 22.626012548303436 29.34134742860191 26.718253090400186 21.314386932694465 38 22.859312463424317 29.82489170459555 24.53336094650419 22.782434885475944 39 22.672766667137346 27.087108571536156 26.00690015485341 24.23322460647309 40 23.894492584451587 24.883389265693616 27.574418279919104 23.64769986993569 41 20.982871989419134 24.676447377297894 28.115542292865918 26.225138340417054 42 23.043347971451748 27.604227953001125 24.707512194509686 24.64491188103744 43 22.50661696295913 26.390660472530385 26.09287752774261 25.00984503676788 44 22.189849963208587 27.35523873625813 28.78594615117897 21.668965149354307 45 21.448216675531125 29.684943134126268 26.258556552872165 22.608283637470443 46 23.665585673784904 28.100951242357347 27.354768057209473 20.878695026648277 47 23.482177737822358 27.276321549098885 27.053376573048602 22.188124140030155 48 22.172277945391816 27.059181614648786 28.381005276312138 22.38753516364726 49 22.31928670159105 25.86224479389749 29.790845920075558 22.0276225844359 50 21.27892911102848 28.343664738451498 28.15335350977522 22.2240526407448 51 21.734075751086092 29.485218324476726 26.54833795383266 22.232367970604525 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 311.0 1 623.0 2 935.0 3 4161.0 4 7387.0 5 5373.0 6 3359.0 7 3299.0 8 3239.0 9 3300.5 10 3362.0 11 3346.0 12 3330.0 13 3172.0 14 3014.0 15 2974.0 16 2934.0 17 2834.5 18 2735.0 19 2753.0 20 2771.0 21 2828.0 22 2885.0 23 3287.0 24 3689.0 25 4089.0 26 5539.0 27 6589.0 28 7566.0 29 8543.0 30 9606.5 31 10670.0 32 12047.5 33 13425.0 34 14680.0 35 15935.0 36 17590.0 37 19245.0 38 23567.5 39 27890.0 40 33107.0 41 38324.0 42 41530.5 43 44737.0 44 46629.5 45 48522.0 46 49856.5 47 51191.0 48 49600.0 49 48009.0 50 46468.0 51 44927.0 52 42487.0 53 40047.0 54 37348.5 55 34650.0 56 33055.0 57 31460.0 58 29687.5 59 27915.0 60 25530.5 61 23146.0 62 20374.0 63 17602.0 64 15204.0 65 12806.0 66 10981.0 67 9156.0 68 7934.5 69 6713.0 70 5824.5 71 4936.0 72 4061.0 73 3186.0 74 2488.0 75 1270.0 76 750.0 77 563.5 78 377.0 79 291.5 80 206.0 81 155.5 82 105.0 83 76.5 84 48.0 85 34.0 86 20.0 87 15.0 88 10.0 89 6.0 90 2.0 91 3.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 637377.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.41872359623458 #Duplication Level Percentage of deduplicated Percentage of total 1 67.80694374771119 25.372492860010315 2 9.193596323957387 6.880252794030395 3 5.074507733716284 5.696448068246531 4 3.542250417106972 5.301859570654897 5 2.5987000359916443 4.862001917814809 6 2.071019598950318 4.649694596130393 7 1.6683158766760378 4.3698375462385295 8 1.3139384510264946 3.933271977714 9 1.106872039025315 3.727596499621995 >10 5.561057756682992 31.819804486900626 >50 0.03793168957108259 0.9653193811994307 >100 0.023601939944362185 1.7101655431024199 >500 4.214632132921818E-4 0.11827961613120758 >1k 8.429264265843636E-4 0.5929751422044539 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1916 0.3006070190797597 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1844 0.28931072191183554 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 750 0.11766976216587673 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006589506681289096 0.0 2 0.0 0.0 0.0 0.026358026725156383 0.0 3 0.0 0.0 0.0 0.03624228674709003 0.0 4 0.0 0.0 0.0 0.05601080679095732 0.0 5 0.0 0.0 0.0 0.09884260021933644 0.0 6 0.0 0.0 0.0 0.16850309942153546 0.0 7 0.0 0.0 0.0 0.21478653920678029 0.0 8 0.0 0.0 0.0 0.5539892402769475 0.0 9 0.0 0.0 0.0 0.7099408984007894 0.0 10 0.0 0.0 0.0 0.9303755861915318 0.0 11 0.0 0.0 0.0 1.0869548163802585 0.0 12 0.0 0.0 0.0 1.2372583259201384 0.0 13 0.0 0.0 0.0 1.3004862114572695 0.0 14 0.0 0.0 0.0 1.3306096705717338 0.0 15 0.0 0.0 0.0 1.3590073065077655 0.0 16 0.0 0.0 0.0 1.4344728473101478 0.0 17 0.0 9.413580973270136E-4 0.0 1.5265690478319738 0.0 18 0.0 9.413580973270136E-4 0.0 1.6674589763985836 0.0 19 0.0 9.413580973270136E-4 0.0 1.7219008530273292 0.0 20 0.0 9.413580973270136E-4 0.0 1.7846580595157968 0.0 21 0.0 9.413580973270136E-4 0.0 1.8660855349345835 0.0 22 0.0 9.413580973270136E-4 0.0 1.950023298612909 0.0 23 0.0 9.413580973270136E-4 0.0 2.0499641499457937 0.0 24 0.0 9.413580973270136E-4 0.0 2.128410658056378 0.0 25 0.0 9.413580973270136E-4 0.0 2.190069613431297 0.0 26 0.0 9.413580973270136E-4 0.0 2.254238857065755 0.0 27 0.0 9.413580973270136E-4 0.0 2.3213890680084157 0.0 28 0.0 9.413580973270136E-4 0.0 2.398580431989231 0.0 29 0.0 9.413580973270136E-4 0.0 2.474830437872719 0.0 30 0.0 9.413580973270136E-4 0.0 2.5793211866760175 0.0 31 0.0 9.413580973270136E-4 0.0 2.6806740751548928 0.0 32 0.0 9.413580973270136E-4 0.0 2.7716720245631707 0.0 33 0.0 9.413580973270136E-4 0.0 2.8727111270096035 0.0 34 0.0 9.413580973270136E-4 0.0 2.972338192310046 0.0 35 0.0 9.413580973270136E-4 0.0 3.0920475636867977 0.0 36 0.0 9.413580973270136E-4 0.0 3.197950349636087 0.0 37 0.0 9.413580973270136E-4 0.0 3.3018135263745005 0.0 38 0.0 9.413580973270136E-4 0.0 3.423091827913464 0.0 39 0.0 9.413580973270136E-4 0.0 3.600537829259606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAT 35 1.2107921E-7 45.0 9 CGATTCA 30 2.1639735E-6 44.999996 10 CGTTTTA 1135 0.0 43.810574 1 CGTTTTT 1565 0.0 42.987217 1 AGGCGAT 615 0.0 41.707317 7 CGACGGT 135 0.0 41.666668 28 CGGTCTA 135 0.0 41.666668 31 ACGGTCT 135 0.0 41.666668 30 CAAGGAC 525 0.0 39.857143 5 ACACGAC 40 3.4549885E-7 39.375 26 GACACGA 40 3.4549885E-7 39.375 25 CACGACC 40 3.4549885E-7 39.375 27 GTTTTAT 1435 0.0 39.19861 2 AATAGGC 75 0.0 39.0 4 CACGACG 145 0.0 38.793102 26 GACGGTC 145 0.0 38.793102 29 GCAAGGA 795 0.0 38.773586 4 ACGTTAG 35 6.2439103E-6 38.571426 2 ATAACGC 35 6.2439103E-6 38.571426 11 CGTTTAG 35 6.2439103E-6 38.571426 2 >>END_MODULE