##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545760_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 287767 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.560105919024767 31.0 31.0 33.0 30.0 34.0 2 31.76291930624429 31.0 31.0 34.0 30.0 34.0 3 31.824166773813538 31.0 31.0 34.0 30.0 34.0 4 35.71912345751945 37.0 35.0 37.0 35.0 37.0 5 27.22653396671613 35.0 26.0 37.0 0.0 37.0 6 31.4139633800957 36.0 28.0 37.0 17.0 37.0 7 14.811899905131582 0.0 0.0 32.0 0.0 37.0 8 24.99543380582207 17.0 17.0 35.0 17.0 37.0 9 33.166002356072795 32.0 32.0 37.0 28.0 39.0 10 36.0805964547707 37.0 35.0 39.0 32.0 39.0 11 37.07653414046781 39.0 37.0 39.0 34.0 39.0 12 37.04205485688074 39.0 35.0 39.0 33.0 39.0 13 36.550052646759355 39.0 35.0 39.0 33.0 39.0 14 37.90024915991062 40.0 36.0 41.0 33.0 41.0 15 38.16869550712903 40.0 36.0 41.0 33.0 41.0 16 38.2277571785507 40.0 36.0 41.0 34.0 41.0 17 38.26365775088874 40.0 36.0 41.0 34.0 41.0 18 38.23473157102795 40.0 36.0 41.0 34.0 41.0 19 38.16992219399723 40.0 36.0 41.0 34.0 41.0 20 38.177563792929696 40.0 36.0 41.0 34.0 41.0 21 38.0435247961024 40.0 36.0 41.0 34.0 41.0 22 37.96032901618323 40.0 35.0 41.0 34.0 41.0 23 37.876942109414905 40.0 35.0 41.0 34.0 41.0 24 37.7234116490077 40.0 35.0 41.0 33.0 41.0 25 37.55343732950616 39.0 35.0 41.0 33.0 41.0 26 37.319372964933436 39.0 35.0 40.0 33.0 41.0 27 37.11406450357407 39.0 35.0 40.0 33.0 41.0 28 37.124718956655904 39.0 35.0 40.0 33.0 41.0 29 37.07242665072785 39.0 35.0 40.0 33.0 41.0 30 36.89621117084308 38.0 35.0 40.0 32.0 41.0 31 36.72279656805679 38.0 35.0 40.0 32.0 41.0 32 36.501732304260045 38.0 35.0 40.0 31.0 41.0 33 36.32015484749815 38.0 35.0 40.0 31.0 41.0 34 36.106506305448505 38.0 35.0 40.0 30.0 41.0 35 35.96935367849684 38.0 35.0 40.0 30.0 41.0 36 35.77689589146775 38.0 35.0 40.0 30.0 41.0 37 35.61899036373177 38.0 35.0 40.0 29.0 41.0 38 35.46527572654266 38.0 34.0 40.0 29.0 41.0 39 35.421636254330764 38.0 34.0 40.0 29.0 41.0 40 35.19572084359916 38.0 34.0 40.0 28.0 41.0 41 35.03863542379773 38.0 34.0 40.0 27.0 41.0 42 35.013406679709625 37.0 34.0 40.0 27.0 41.0 43 34.91411106902459 37.0 34.0 40.0 27.0 41.0 44 34.69204947057863 37.0 34.0 40.0 26.0 40.0 45 34.480023769229966 37.0 34.0 40.0 26.0 40.0 46 34.43442437805586 36.0 34.0 39.0 26.0 40.0 47 34.280139835352905 36.0 33.0 39.0 26.0 40.0 48 34.20934645042691 36.0 33.0 39.0 26.0 40.0 49 34.08289692702777 36.0 33.0 39.0 25.0 40.0 50 34.1572278961799 36.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 1.0 15 7.0 16 6.0 17 35.0 18 76.0 19 163.0 20 356.0 21 539.0 22 923.0 23 1396.0 24 2219.0 25 3290.0 26 4000.0 27 4562.0 28 4710.0 29 5307.0 30 6667.0 31 9059.0 32 12788.0 33 24286.0 34 24886.0 35 30220.0 36 39514.0 37 72818.0 38 32133.0 39 7804.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.04409470161624 23.97286693748762 28.09738434219351 14.885654018702631 2 33.340515069483295 23.725097040313862 29.63751924299868 13.296868647204164 3 30.324880893222645 24.31550525251332 32.2291993175034 13.130414536760643 4 27.890272338384875 26.552384394319017 30.63311637540093 14.924226891895179 5 17.928740960568792 47.293470064322875 23.107931069233096 11.669857905875238 6 20.782786073455263 41.09088255428871 28.013983535290706 10.112347836965323 7 38.726469678594135 56.43802103785354 3.8555498024443384 0.9799594811079797 8 87.59517248329377 2.875590321336359 7.656194073677663 1.8730431216922023 9 83.02307074820949 5.0023108973579316 9.15011102732419 2.82450732710839 10 50.67224525397284 22.405626774439042 14.381774143664842 12.540353827923283 11 44.774418192496015 19.902907560630652 20.07075168452255 15.251922562350792 12 39.26892242682448 20.848464208891222 25.708646231152287 14.173967133132011 13 21.96360249785417 37.15783950209718 25.98873394100088 14.88982405904777 14 16.852175544798396 39.66472875625072 28.806986207591557 14.676109491359329 15 15.898626319209638 22.304503296069388 45.95801464379168 15.838855740929295 16 17.185778772409623 17.56073490011016 45.02114557958348 20.232340747896735 17 18.077472399545467 17.456831394843743 30.098308701136684 34.36738750447411 18 22.317360920466907 22.786490459295194 33.51739428078967 21.378754339448232 19 29.48983031410829 22.585633516004265 26.41164553267053 21.512890637216913 20 30.43469195564467 22.50501273599822 25.39207066828372 21.66822464007339 21 23.51451000288428 26.460991010088026 28.709337762842857 21.315161224184845 22 23.34180083192305 23.775485027817645 25.882050408837703 27.000663731421604 23 21.116736804428584 28.911584719582162 25.58667255105693 24.385005924932322 24 21.182414939864543 23.648298797290863 37.065751111142 18.103535151702594 25 20.094729416507104 23.25596750148558 34.34445228257583 22.304850799431485 26 18.23176389231566 31.85667571333753 27.591071943621053 22.32048845072576 27 19.983875843998792 29.973902497506664 29.9853701084558 20.056851550038747 28 17.8932956176351 26.422765640257566 37.46259995065452 18.22133879145281 29 18.179985891363497 25.043872299464496 35.622222144999256 21.15391966417275 30 20.874874464410443 28.198855323925258 31.93138893618796 18.99488127547634 31 30.085798580101265 25.023369601100892 24.60601806322476 20.284813755573087 32 29.950619772246295 25.451493743201965 26.448133385690507 18.149753098861233 33 28.21831551220258 25.170711026629185 25.347242734573456 21.26373072659478 34 20.465863007224595 26.42485066043014 28.820538838713265 24.288747493632002 35 21.853443932070043 24.78706731487627 30.30472569822113 23.054763054832556 36 30.832930808605575 24.80861252332616 25.324307512675187 19.03414915539308 37 21.838501287499955 31.55504279503904 26.70945591398597 19.897000003475036 38 22.50848776961917 32.240666928452534 22.902209078872836 22.348636223055458 39 22.132836635194444 29.352218982718657 25.860505200387813 22.654439181699082 40 24.228629411989562 24.71235409202584 26.072134747903686 24.986881748080915 41 19.323271952656143 23.865140895238163 27.067036873581753 29.744550278523946 42 22.471304909875002 27.12298491487905 23.37168612106322 27.034024054182726 43 23.18299179544562 25.872320314699042 25.464003864237387 25.48068402561795 44 21.063221286665947 29.29627094142136 27.77802875242818 21.862479019484514 45 19.881709855542855 33.894087925300674 23.78139258497326 22.44280963418321 46 22.898386541889792 30.153214232347697 26.537094246386832 20.411304979375675 47 23.043642947245516 26.67088304079342 27.537208922496326 22.748265089464738 48 23.83386559264961 24.16573130345036 29.56245851678615 22.437944587113883 49 21.43504988410763 24.230366928800038 31.33993821390222 22.994644973190116 50 20.50895342412438 30.51322771547815 27.43504293404039 21.542775926357088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 140.0 1 259.0 2 378.0 3 1699.5 4 3021.0 5 2273.0 6 1525.0 7 1530.0 8 1535.0 9 1583.0 10 1631.0 11 1634.0 12 1637.0 13 1561.5 14 1486.0 15 1344.5 16 1203.0 17 1167.0 18 1131.0 19 1128.5 20 1126.0 21 1152.5 22 1179.0 23 1297.0 24 1415.0 25 1659.0 26 1903.0 27 2291.5 28 2680.0 29 3117.0 30 3554.0 31 4098.5 32 4643.0 33 5054.5 34 5466.0 35 5878.5 36 6291.0 37 7788.5 38 9286.0 39 13060.0 40 16834.0 41 20726.5 42 24619.0 43 25650.5 44 26682.0 45 26209.5 46 25737.0 47 24788.5 48 23840.0 49 23014.0 50 22188.0 51 20841.0 52 19494.0 53 17546.0 54 15598.0 55 14580.0 56 13562.0 57 12715.5 58 11869.0 59 10928.5 60 9988.0 61 9092.0 62 8196.0 63 7082.0 64 5968.0 65 4969.5 66 3971.0 67 3455.0 68 2939.0 69 2535.5 70 2132.0 71 1734.0 72 1336.0 73 1071.0 74 806.0 75 593.0 76 380.0 77 305.5 78 231.0 79 155.5 80 80.0 81 63.5 82 47.0 83 34.5 84 22.0 85 15.0 86 8.0 87 8.0 88 8.0 89 4.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 287767.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.0043202031122 #Duplication Level Percentage of deduplicated Percentage of total 1 62.39391156689567 21.840564592122817 2 10.11598566225465 7.082064025833075 3 6.246130136895712 6.559246180266196 4 4.288996604832781 6.005336420225111 5 3.338995326268922 5.843963077870621 6 2.4989964593197236 5.248540334908274 7 2.017997139849122 4.944703263657027 8 1.5919977436057429 4.458143902384603 9 1.232998252427849 3.884423907407597 >10 6.234991162925834 32.395752345927214 >50 0.02999995747999599 0.7802451914581813 >100 0.007999988661332265 0.6311269987434279 >500 9.99998582666533E-4 0.3258897591958577 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 931 0.32352563011047136 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 442 0.15359648604600248 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 404 0.1403913582863914 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 393 0.13656882130334613 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0034750336209502827 0.0 2 0.0 0.0 0.0 0.026757758881317175 0.0 3 0.0 0.0 0.0 0.03579284629578791 0.0 4 0.0 0.0 0.0 0.05004048414168407 0.0 5 0.0 0.0 0.0 0.08340080690280678 0.0 6 0.0 0.0 0.0 0.14525640535572182 0.0 7 0.0 0.0 0.0 0.1893893323417904 0.0 8 0.0 0.0 0.0 0.43229418244621515 0.0 9 0.0 0.0 0.0 0.5421052448682441 0.0 10 0.0 0.0 0.0 0.7231544965197538 0.0 11 0.0 0.0 0.0 0.8826585397213718 0.0 12 0.0 0.0 0.0 1.0220073879214782 0.0 13 0.0 0.0 0.0 1.0793454426671578 0.0 14 0.0 0.0 0.0 1.1005431477549545 0.0 15 0.0 0.0 0.0 1.1384210142233127 0.0 16 0.0 0.0 0.0 1.2134817404358387 0.0 17 0.0 0.0 0.0 1.2982725607870256 0.0 18 0.0 0.0 0.0 1.4365788989008468 0.0 19 0.0 0.0 0.0 1.4970444839053818 0.0 20 0.0 0.0 0.0 1.5627226193413422 0.0 21 0.0 0.0 0.0 1.6367408354675832 0.0 22 0.0 0.0 0.0 1.719794139008295 0.0 23 0.0 0.0 0.0 1.8031949459111016 0.0 24 0.0 0.0 0.0 1.8671355645365868 0.0 25 0.0 0.0 0.0 1.9248211226443617 0.0 26 0.0 0.0 0.0 1.9745141034239506 0.0 27 0.0 0.0 0.0 2.02351207747935 0.0 28 0.0 0.0 0.0 2.0728575548968435 0.0 29 0.0 0.0 0.0 2.1347131533497588 0.0 30 0.0 0.0 0.0 2.2108163896485697 0.0 31 0.0 0.0 0.0 2.295954713361852 0.0 32 0.0 0.0 0.0 2.3661503925050473 0.0 33 0.0 0.0 0.0 2.433913548113578 0.0 34 0.0 0.0 0.0 2.5044567306188688 0.0 35 0.0 0.0 0.0 2.606622719074807 0.0 36 0.0 0.0 0.0 2.6809884385631433 0.0 37 0.0 0.0 0.0 2.764736748828045 0.0 38 0.0 0.0 0.0 2.8397974750405712 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTAG 35 1.4410216E-7 44.0 2 TTAGGCC 50 2.7284841E-11 44.0 5 AGGTAGC 25 4.4344983E-5 44.0 7 ATAGGCG 25 4.4344983E-5 44.0 5 GCGAATG 25 4.4344983E-5 44.0 1 ACCATAC 20 7.846634E-4 44.0 44 TCCGAAC 20 7.846634E-4 44.0 30 TAGGTGT 20 7.846634E-4 44.0 6 TACGGGA 50 2.7284841E-11 44.0 4 ACGGGAT 25 4.4344983E-5 44.0 5 CGTTAAG 20 7.846634E-4 44.0 2 TCGTGGC 20 7.846634E-4 44.0 38 TGCGCAA 20 7.846634E-4 44.0 1 CTACGGG 50 2.7284841E-11 44.0 3 TAAGGCG 55 1.8189894E-12 44.0 5 CGGTCTA 30 2.5210793E-6 44.0 31 CGCAATA 20 7.846634E-4 44.0 37 CTAGGAT 40 8.274583E-9 44.0 5 AGTACGG 20 7.846634E-4 44.0 2 CGTTTTA 660 0.0 43.666664 1 >>END_MODULE