SRR1545759_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545759_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	109420
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	226	0.2065435934929629	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	215	0.19649058673003109	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	159	0.1453116432096509	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCGAT	20	7.005301E-4	45.000004	8
GGATCCA	20	7.005301E-4	45.000004	8
ACGGGGC	20	7.005301E-4	45.000004	5
ACGGGCT	20	7.005301E-4	45.000004	5
ATATCAC	30	2.1474752E-6	45.000004	30
GTAGCAA	20	7.005301E-4	45.000004	1
ACAGGCT	20	7.005301E-4	45.000004	5
ATATAAT	30	2.1474752E-6	45.000004	37
CTCATGC	35	1.1984957E-7	45.000004	23
GCGATTG	20	7.005301E-4	45.000004	9
TATAGGC	20	7.005301E-4	45.000004	4
AGTTAAT	30	2.1474752E-6	45.000004	39
TGAGGCG	20	7.005301E-4	45.000004	5
ACGTAAG	20	7.005301E-4	45.000004	2
GGCGATT	40	6.717528E-9	45.000004	8
CGCAAGG	20	7.005301E-4	45.000004	3
AAGGCCT	20	7.005301E-4	45.000004	6
ACATAGT	30	2.1474752E-6	45.000004	35
TCGAAGG	40	6.717528E-9	45.000004	3
CGAAGGC	30	2.1474752E-6	45.000004	4