##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545759_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 109420 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.051498811917384 31.0 31.0 33.0 30.0 33.0 2 31.198336684335587 31.0 31.0 33.0 30.0 34.0 3 31.151160665326266 31.0 31.0 34.0 28.0 34.0 4 35.1387863279108 35.0 35.0 37.0 33.0 37.0 5 32.95409431548163 35.0 35.0 37.0 28.0 37.0 6 34.08994699323707 35.0 35.0 37.0 29.0 37.0 7 15.131411076585634 0.0 0.0 35.0 0.0 37.0 8 24.83692195211113 17.0 17.0 35.0 17.0 37.0 9 32.663909705721075 32.0 32.0 37.0 27.0 39.0 10 35.53982818497533 37.0 35.0 37.0 32.0 39.0 11 36.528184975324436 37.0 35.0 39.0 33.0 39.0 12 36.358764394077866 37.0 35.0 39.0 32.0 39.0 13 36.04298117346006 37.0 35.0 39.0 31.0 39.0 14 37.09065984280753 39.0 35.0 40.0 32.0 41.0 15 37.42172363370499 39.0 36.0 41.0 32.0 41.0 16 37.45704624383111 39.0 35.0 41.0 32.0 41.0 17 37.442176932919025 39.0 35.0 41.0 32.0 41.0 18 37.34496435752148 39.0 36.0 41.0 32.0 41.0 19 37.2879546700786 39.0 36.0 41.0 32.0 41.0 20 37.37856881740084 39.0 35.0 41.0 32.0 41.0 21 37.256031804057756 39.0 35.0 41.0 32.0 41.0 22 37.31104002924511 39.0 35.0 41.0 32.0 41.0 23 37.29528422591848 39.0 35.0 41.0 32.0 41.0 24 37.10775909340157 39.0 35.0 41.0 32.0 41.0 25 36.861158837506856 38.0 35.0 40.0 31.0 41.0 26 36.7641381831475 38.0 35.0 40.0 31.0 41.0 27 36.6629866569183 38.0 35.0 40.0 31.0 41.0 28 36.5457503198684 38.0 35.0 40.0 31.0 41.0 29 36.55632425516359 38.0 35.0 40.0 31.0 41.0 30 36.31776640467922 38.0 35.0 40.0 30.0 41.0 31 36.22852312191556 38.0 35.0 40.0 30.0 41.0 32 36.09772436483276 38.0 35.0 40.0 30.0 41.0 33 35.93864924145495 38.0 35.0 40.0 30.0 41.0 34 35.78112776457686 38.0 35.0 40.0 29.0 41.0 35 35.63064339243283 38.0 34.0 40.0 28.0 41.0 36 35.44400475233047 38.0 34.0 40.0 27.0 41.0 37 35.25580332663133 38.0 34.0 40.0 27.0 41.0 38 35.1505757631146 38.0 34.0 40.0 26.0 41.0 39 35.0572198866752 38.0 34.0 40.0 26.0 41.0 40 34.9022847742643 38.0 34.0 40.0 25.0 41.0 41 34.809522939133615 38.0 34.0 40.0 24.0 41.0 42 34.761195393895086 37.0 34.0 40.0 24.0 41.0 43 34.68679400475233 37.0 33.0 40.0 24.0 41.0 44 34.37637543410711 37.0 33.0 40.0 23.0 41.0 45 34.31891793090843 37.0 33.0 40.0 23.0 41.0 46 34.314101626759275 37.0 33.0 40.0 23.0 41.0 47 34.30977883385122 37.0 33.0 40.0 23.0 41.0 48 34.265061231950284 36.0 33.0 40.0 23.0 41.0 49 34.137872418205085 36.0 33.0 40.0 24.0 41.0 50 34.000932187899835 36.0 33.0 40.0 24.0 41.0 51 33.859906781210015 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 2.0 15 5.0 16 7.0 17 26.0 18 56.0 19 109.0 20 206.0 21 327.0 22 497.0 23 749.0 24 1073.0 25 1448.0 26 1826.0 27 1964.0 28 2157.0 29 2557.0 30 3121.0 31 3948.0 32 5398.0 33 8295.0 34 10670.0 35 11258.0 36 12921.0 37 19838.0 38 17470.0 39 3490.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.477609212209835 24.819045878267225 28.375068543227925 14.32827636629501 2 33.0095046609395 23.52220800584902 30.149881191738253 13.318406141473222 3 30.67994882105648 24.068726009870225 31.988667519649063 13.262657649424236 4 28.206909157375254 27.06360811551819 29.383110948638276 15.346371778468287 5 21.942058124657287 35.90568451836958 28.157558033266312 13.994699323706818 6 21.06104916834217 41.69530250411259 27.33412538841162 9.909522939133614 7 37.793821970389324 57.43191372692378 4.013891427526961 0.7603728751599342 8 87.98665691829648 3.1639554012063607 7.029793456406506 1.81959422409066 9 83.22518735148967 5.237616523487479 8.623651983184061 2.9135441418387864 10 50.76859806251143 22.86693474684701 13.786327910802413 12.578139279839151 11 45.33631877170535 20.342716139645404 19.344726740997988 14.976238347651252 12 39.62346920124292 21.45403034180223 24.835496252970206 14.087004203984646 13 22.070005483458235 37.969292633887775 25.232133065253155 14.728568817400841 14 16.72546152440139 40.26137817583623 28.37689636263937 14.636263937123012 15 15.847194297203437 22.511423871321515 45.95229391336136 15.689087918113689 16 17.15042953756169 17.86510692743557 44.64174739535734 20.342716139645404 17 18.0789617985743 17.85048437214403 29.683787241820507 34.38676658746116 18 22.36428440870042 23.082617437397186 33.39151891793091 21.161579235971487 19 30.18186803143849 22.583622738073476 26.01078413452751 21.223725095960518 20 31.054651800402123 22.441966733686712 24.971668799122646 21.531712666788522 21 23.437214403216963 27.312191555474318 28.16395540120636 21.086638640102358 22 23.184975324437946 24.213123743374155 25.40394808992871 27.19795284225918 23 21.041857064522027 29.340157192469384 25.360994333759823 24.256991409248766 24 20.9193931639554 23.95265947724365 37.14677389873881 17.98117346006215 25 20.11058307439225 23.574300859075123 34.49826357155913 21.816852494973496 26 17.9921403765308 32.948272710656184 27.205264119904953 21.85432279290806 27 19.869310912081886 31.123195028331203 29.341071102175103 19.666422957411807 28 17.58362273807348 27.007859623469198 37.5150795101444 17.893438128312923 29 17.91628587095595 25.434107110217514 35.65801498811918 20.991592030707366 30 20.887406324255164 29.071467738987387 31.444891244745023 18.596234692012427 31 30.818863096326083 25.248583439956136 24.13087186985926 19.80168159385853 32 30.798757082800222 25.370133430817038 26.111314202156827 17.719795284225917 33 28.785414001096694 25.059404130871872 25.024675562054473 21.130506305976972 34 20.60318040577591 26.53719612502285 28.22335953207823 24.63626393712301 35 21.897276549076953 24.690184609760554 30.545604094315483 22.86693474684701 36 31.307804788886855 25.05666240175471 24.860171815024675 18.77536099433376 37 21.56369950648876 32.819411442149516 26.276731858892344 19.340157192469384 38 22.208919758727838 33.07073661122281 22.70243099981722 22.017912630232132 39 22.306708097239994 29.84554925973314 25.415828916103088 22.43191372692378 40 24.44799853774447 24.983549625297023 25.92853226101261 24.639919575945896 41 19.14915006397368 24.20946810455127 26.81045512703345 29.8309267044416 42 22.257356973131053 26.897276549076953 23.251690732955584 27.59367574483641 43 22.871504295375615 25.682690550173643 25.432279290806072 26.01352586364467 44 20.541034545786875 29.701151526229207 28.352220800584902 21.405593127399015 45 19.43063425333577 34.97715225735698 23.56242003290075 22.02979345640651 46 22.42186072016085 30.89654542131238 26.23195028331201 20.44964357521477 47 23.034180222993967 26.67611040029245 27.191555474319134 23.098153902394444 48 23.099067812100166 24.734966185340888 29.96618534088832 22.199780661670626 49 21.491500639736792 24.584171083896912 31.60756717236337 22.316761104002925 50 20.470663498446353 31.27216231036374 27.025223907877905 21.23195028331201 51 21.150612319502834 31.836958508499357 24.927801133248035 22.08462803874977 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 54.0 1 97.0 2 140.0 3 524.0 4 908.0 5 726.5 6 545.0 7 534.0 8 523.0 9 529.0 10 535.0 11 566.0 12 597.0 13 542.0 14 487.0 15 451.5 16 416.0 17 384.5 18 353.0 19 374.0 20 395.0 21 427.0 22 459.0 23 486.0 24 513.0 25 589.5 26 818.0 27 970.0 28 1158.5 29 1347.0 30 1523.0 31 1699.0 32 1898.5 33 2098.0 34 2283.0 35 2468.0 36 2760.5 37 3053.0 38 4413.5 39 5774.0 40 7091.5 41 8409.0 42 9179.5 43 9950.0 44 9855.0 45 9760.0 46 9282.0 47 8804.0 48 8533.0 49 8262.0 50 7914.0 51 7566.0 52 7005.0 53 6444.0 54 6073.5 55 5703.0 56 5333.5 57 4964.0 58 4486.0 59 4008.0 60 3639.0 61 3270.0 62 2925.5 63 2581.0 64 2206.5 65 1832.0 66 1535.0 67 1238.0 68 1086.0 69 934.0 70 841.5 71 749.0 72 592.5 73 436.0 74 344.0 75 188.0 76 124.0 77 98.5 78 73.0 79 52.0 80 31.0 81 23.0 82 15.0 83 10.0 84 5.0 85 5.5 86 6.0 87 5.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 109420.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.18387863279108 #Duplication Level Percentage of deduplicated Percentage of total 1 64.59297248081461 31.769329190276004 2 13.339651039634317 13.121915554743191 3 7.499489009049186 11.065618716870773 4 4.842336064812234 9.526594772436484 5 3.2870654254231932 8.083531347102907 6 2.2390694390248433 6.607567172363371 7 1.4586468959622425 5.0219338329373056 8 0.8844788821376145 3.4801681593858524 9 0.5964658007692737 2.640285139828185 >10 1.254250515636323 8.134710290623287 >50 0.0 0.0 >100 0.005574446736161436 0.5483458234326449 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 226 0.2065435934929629 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 215 0.19649058673003109 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 159 0.1453116432096509 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0027417291171632245 0.0 2 0.0 0.0 0.0 0.021933832937305796 0.0 3 0.0 0.0 0.0 0.03015902028879547 0.0 4 0.0 0.0 0.0 0.046609394991774813 0.0 5 0.0 0.0 0.0 0.0795101443977335 0.0 6 0.0 0.0 0.0 0.11880826174373972 0.0 7 0.0 0.0 0.0 0.15079510144397734 0.0 8 0.0 0.0 0.0 0.3555108755254981 0.0 9 0.0 0.0 0.0 0.45147139462621094 0.0 10 0.0 0.0 0.0 0.6114055931273991 0.0 11 0.0 0.0 0.0 0.7402668616340705 0.0 12 0.0 0.0 0.0 0.8755254980807896 0.0 13 0.0 0.0 0.0 0.9221348930725645 0.0 14 0.0 0.0 0.0 0.9340157192469384 0.0 15 0.0 0.0 0.0 0.9577773715956863 0.0 16 0.0 0.0 0.0 1.026320599524767 0.0 17 0.0 0.0 0.0 1.1058307439225004 0.0 18 0.0 0.0 0.0 1.2127581794918663 0.0 19 0.0 0.0 0.0 1.2520562968378723 0.0 20 0.0 0.0 0.0 1.3032352403582526 0.0 21 0.0 0.0 0.0 1.3589837324072382 0.0 22 0.0 0.0 0.0 1.4211295923962712 0.0 23 0.0 0.0 0.0 1.4878450009139097 0.0 24 0.0 0.0 0.0 1.540851763845732 0.0 25 0.0 0.0 0.0 1.5966002558947177 0.0 26 0.0 0.0 0.0 1.6532626576494243 0.0 27 0.0 0.0 0.0 1.699872052641199 0.0 28 0.0 0.0 0.0 1.7537927252787424 0.0 29 0.0 0.0 0.0 1.8113690367391702 0.0 30 0.0 0.0 0.0 1.8726009870224822 0.0 31 0.0 0.0 0.0 1.9365746664229575 0.0 32 0.0 0.0 0.0 1.9840979711204534 0.0 33 0.0 0.0 0.0 2.051727289343813 0.0 34 0.0 0.0 0.0 2.129409614330104 0.0 35 0.0 0.0 0.0 2.223542314019375 0.0 36 0.0 0.0 0.0 2.288429903125571 0.0 37 0.0 0.0 0.0 2.3661122281118625 0.0 38 0.0 0.0 0.0 2.433741546335222 0.0 39 0.0 0.0 0.0 2.5114238713215133 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCCGAT 20 7.005301E-4 45.000004 8 GGATCCA 20 7.005301E-4 45.000004 8 ACGGGGC 20 7.005301E-4 45.000004 5 ACGGGCT 20 7.005301E-4 45.000004 5 ATATCAC 30 2.1474752E-6 45.000004 30 GTAGCAA 20 7.005301E-4 45.000004 1 ACAGGCT 20 7.005301E-4 45.000004 5 ATATAAT 30 2.1474752E-6 45.000004 37 CTCATGC 35 1.1984957E-7 45.000004 23 GCGATTG 20 7.005301E-4 45.000004 9 TATAGGC 20 7.005301E-4 45.000004 4 AGTTAAT 30 2.1474752E-6 45.000004 39 TGAGGCG 20 7.005301E-4 45.000004 5 ACGTAAG 20 7.005301E-4 45.000004 2 GGCGATT 40 6.717528E-9 45.000004 8 CGCAAGG 20 7.005301E-4 45.000004 3 AAGGCCT 20 7.005301E-4 45.000004 6 ACATAGT 30 2.1474752E-6 45.000004 35 TCGAAGG 40 6.717528E-9 45.000004 3 CGAAGGC 30 2.1474752E-6 45.000004 4 >>END_MODULE