SRR1545757_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545757_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	428342
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1254	0.29275672243207534	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1142	0.266609391560949	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	986	0.23018989499045153	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	85	0.0	45.0	25
TTTAGCG	35	1.209537E-7	45.0	1
TTAATCG	40	6.7975634E-9	45.0	20
GGTAAGT	25	3.8866936E-5	45.0	8
GTACAAC	20	7.0283253E-4	45.0	21
ATAGGCC	40	6.7975634E-9	45.0	5
ACGTTAT	20	7.0283253E-4	45.0	15
CGCATCG	20	7.0283253E-4	45.0	21
CGTTGAT	40	6.7975634E-9	45.0	25
GATCCAC	20	7.0283253E-4	45.0	23
TTACTAC	20	7.0283253E-4	45.0	27
CAATTGC	25	3.8866936E-5	45.0	25
CGATTCG	25	3.8866936E-5	45.0	10
TAACGGC	20	7.0283253E-4	45.0	18
ATCGTTG	50	2.1827873E-11	45.0	23
CGTTATC	20	7.0283253E-4	45.0	16
ACTAGGT	20	7.0283253E-4	45.0	4
CCGTAAC	20	7.0283253E-4	45.0	15
GTGTCGA	20	7.0283253E-4	45.0	1
TGTTACG	25	3.8866936E-5	45.0	1