##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545757_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 428342 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01426196824033 31.0 31.0 33.0 30.0 33.0 2 31.17798394740651 31.0 31.0 33.0 30.0 34.0 3 31.12074463862988 31.0 31.0 34.0 28.0 34.0 4 35.08698890139188 35.0 35.0 37.0 32.0 37.0 5 32.77458199289353 35.0 35.0 37.0 28.0 37.0 6 33.96639134149815 35.0 35.0 37.0 28.0 37.0 7 15.445113951001769 0.0 0.0 35.0 0.0 37.0 8 24.997912882696536 17.0 17.0 35.0 17.0 37.0 9 32.77384659921278 32.0 32.0 37.0 27.0 39.0 10 35.55487904524889 37.0 35.0 37.0 32.0 39.0 11 36.49329741188116 37.0 35.0 39.0 32.0 39.0 12 36.22539933044156 37.0 35.0 39.0 32.0 39.0 13 35.76911439924173 37.0 35.0 39.0 31.0 39.0 14 36.78009861279072 39.0 35.0 40.0 31.0 41.0 15 37.194337702116535 39.0 35.0 41.0 32.0 41.0 16 37.29496290347433 39.0 35.0 41.0 32.0 41.0 17 37.27168477524968 39.0 35.0 41.0 32.0 41.0 18 37.19521550536721 39.0 35.0 40.0 32.0 41.0 19 37.099278146901305 39.0 35.0 40.0 32.0 41.0 20 37.206206722665534 39.0 35.0 40.0 32.0 41.0 21 37.02620336086585 39.0 35.0 40.0 32.0 41.0 22 37.094578631093846 39.0 35.0 40.0 32.0 41.0 23 37.09022930275341 39.0 35.0 40.0 32.0 41.0 24 36.91244846407777 38.0 35.0 40.0 32.0 41.0 25 36.66157416270177 38.0 35.0 40.0 31.0 41.0 26 36.55210789509317 38.0 35.0 40.0 31.0 41.0 27 36.439277493218036 38.0 35.0 40.0 31.0 41.0 28 36.390304943246285 38.0 35.0 40.0 31.0 41.0 29 36.39704488469494 38.0 35.0 40.0 31.0 41.0 30 36.15921389917403 38.0 35.0 40.0 30.0 41.0 31 36.00623800607926 38.0 34.0 40.0 30.0 41.0 32 35.85024583160185 38.0 34.0 40.0 30.0 41.0 33 35.64995494254591 38.0 34.0 40.0 29.0 41.0 34 35.514145239084655 38.0 34.0 40.0 28.0 41.0 35 35.31919587619239 38.0 34.0 40.0 27.0 41.0 36 35.1315794388596 38.0 34.0 40.0 26.0 41.0 37 34.9723001713584 38.0 34.0 40.0 25.0 41.0 38 34.89045435656555 38.0 34.0 40.0 25.0 41.0 39 34.82510704063576 38.0 34.0 40.0 25.0 41.0 40 34.66044655905795 37.0 33.0 40.0 24.0 41.0 41 34.547856619243504 37.0 33.0 40.0 24.0 41.0 42 34.50619131441699 37.0 33.0 40.0 23.0 41.0 43 34.41667405951319 37.0 33.0 40.0 23.0 41.0 44 34.16344649835879 37.0 33.0 40.0 23.0 41.0 45 34.05306040500348 36.0 33.0 40.0 23.0 41.0 46 34.057755251644714 36.0 33.0 40.0 23.0 41.0 47 34.02540493344104 36.0 33.0 40.0 23.0 41.0 48 34.011866685965884 36.0 33.0 40.0 23.0 41.0 49 33.929210770832654 36.0 33.0 40.0 23.0 41.0 50 33.79144001755606 36.0 33.0 40.0 23.0 41.0 51 33.57761321560809 36.0 33.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 5.0 15 12.0 16 51.0 17 114.0 18 287.0 19 495.0 20 861.0 21 1411.0 22 2328.0 23 3263.0 24 4674.0 25 6246.0 26 7648.0 27 8321.0 28 9141.0 29 10509.0 30 12772.0 31 16404.0 32 22456.0 33 33939.0 34 42922.0 35 43669.0 36 47848.0 37 73192.0 38 67090.0 39 12679.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.160283138240004 24.44728744788043 29.149371296767534 14.243058117112028 2 32.45093873586993 24.031731653678605 30.812061390197552 12.70526822025391 3 29.48461743186519 22.87237767951777 34.311601477324196 13.331403411292845 4 27.264895807555646 26.998986790928743 30.616423325286803 15.119694076228807 5 21.135214384767313 36.952481895307955 28.70720125507188 13.205102464852853 6 20.2172563045417 40.81084740697853 28.218806467729056 10.753089820750708 7 38.29159876920779 56.63068295894402 4.287228429619323 0.7904898422288732 8 88.42677113147906 2.8145734016276713 7.124914204070579 1.6337412628226977 9 84.14911449262506 4.442478206666635 8.758188550270578 2.6502187504377344 10 54.79826867316303 21.457620312740755 13.37856199018541 10.3655490239108 11 48.983755970696315 18.993934753071144 19.0273192915941 12.994989984638444 12 43.77997021071947 20.16612893435619 23.178441525696755 12.875459329227578 13 21.493572892688555 41.56234971121207 23.883952542594468 13.06012485350491 14 14.74172507015422 43.49911986216621 27.67531551890779 14.083839548771776 15 13.173819051132037 22.514486088219225 49.80739689313679 14.504297967511942 16 15.261636729529208 16.117728357247245 48.8455486503775 19.77508626284604 17 15.614158779666715 16.99086244169379 30.258531733988264 37.13644704465124 18 21.57271526023598 21.8141111541712 35.68223522325618 20.930938362336637 19 29.68329045482348 23.24124181144973 26.24771794500656 20.82774978872023 20 32.16635305433509 21.879012564726317 25.201824710161507 20.75280967077709 21 22.733469984264907 28.190791470367138 27.731578971942984 21.344159573424974 22 22.363205102464853 23.502481661849643 24.974669773218597 29.159643462466907 23 18.8494240583459 30.195031073301244 25.548743760826632 25.406801107526228 24 20.01438103197912 22.838759682683463 39.924639657096435 17.222219628240985 25 17.94197160213101 23.206456523058677 37.33185165125064 21.51972022355968 26 16.422391453558138 33.859859644863214 28.078498022608102 21.639250878970543 27 17.882906649359622 33.32057094564624 29.590140588595094 19.206381816399045 28 15.7612375158168 27.04170966190567 39.47966811566459 17.71738470661294 29 15.57330357518058 24.585027851576545 38.61797348847416 21.223695084768714 30 19.01517945940393 29.831536482530314 31.906047037180567 19.24723702088518 31 30.973614541651294 24.673742009889292 24.7419118368033 19.610731611656107 32 31.75826792609644 25.887258312283173 25.236609998552556 17.117863763067827 33 28.87108898963912 25.836831317031717 25.773097198033344 19.518982495295813 34 20.101927898735124 26.297911481946667 28.3462747057258 25.253885913592413 35 20.427835701378804 24.43398032413352 32.21584621634115 22.922337758146526 36 30.71727731578972 23.792670342856876 26.02009609144095 19.469956249912453 37 19.998739325118713 32.52494502056768 27.80301721521588 19.67329843909773 38 21.333653949414252 33.597452502906556 23.15556261118452 21.91333093649467 39 20.74557246312526 31.112989153526854 25.83916590014521 22.302272483202675 40 24.218965219380774 24.98797689696551 25.552479093808216 25.240578789845497 41 17.463382063864856 23.403261879526173 27.18738764818766 31.94596840842131 42 21.629912546516568 25.905701518879777 23.618276984278918 28.84610895032474 43 22.263985320141384 25.539171970061307 25.231240457391525 26.96560225240579 44 20.562541147027375 29.299018074342463 28.771635749004297 21.36680502962586 45 18.219786992636724 36.677934921161125 23.005448916986893 22.096829169215255 46 22.00554696947766 31.590411400236263 27.039141620480834 19.36490000980525 47 22.422036596924887 27.08886824079824 26.377520766116795 24.111574396160076 48 22.0620438808242 24.32448837611068 31.021473495477913 22.59199424758721 49 20.659426346237353 23.675707728870858 32.69280154642785 22.972064378463937 50 19.480928790545875 31.869860998921425 27.15913919251439 21.490071018018313 51 18.862264265470117 33.54025521662597 24.916305195381263 22.681175322522655 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 324.0 1 465.5 2 607.0 3 2328.5 4 4050.0 5 3081.0 6 2112.0 7 2148.5 8 2185.0 9 2272.0 10 2359.0 11 2332.5 12 2306.0 13 2216.0 14 2126.0 15 1994.0 16 1862.0 17 1726.0 18 1590.0 19 1597.5 20 1605.0 21 1599.0 22 1593.0 23 1725.5 24 1858.0 25 2160.0 26 2934.0 27 3406.0 28 4030.5 29 4655.0 30 5553.0 31 6451.0 32 7392.0 33 8333.0 34 8821.0 35 9309.0 36 10637.0 37 11965.0 38 17099.0 39 22233.0 40 29804.0 41 37375.0 42 39960.0 43 42545.0 44 41084.0 45 39623.0 46 39375.5 47 39128.0 48 36981.5 49 34835.0 50 32269.5 51 29704.0 52 26684.5 53 23665.0 54 21361.0 55 19057.0 56 17915.5 57 16774.0 58 15737.5 59 14701.0 60 13275.5 61 11850.0 62 10237.5 63 8625.0 64 7179.5 65 5734.0 66 4786.5 67 3839.0 68 3344.0 69 2849.0 70 2382.0 71 1915.0 72 1558.0 73 1201.0 74 989.0 75 586.5 76 396.0 77 295.0 78 194.0 79 148.0 80 102.0 81 69.5 82 37.0 83 27.5 84 18.0 85 10.0 86 2.0 87 1.0 88 0.0 89 1.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 428342.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.463004618441836 #Duplication Level Percentage of deduplicated Percentage of total 1 70.97036042143361 20.9100005686918 2 7.051946646053898 4.155430732033828 3 3.7403644455919665 3.306071248053952 4 2.4815787286439748 2.924590621722577 5 1.813131040235524 2.6710144106149745 6 1.5172019643059234 2.6820797088872665 7 1.2643735522618407 2.6076570666808423 8 1.0736897622501547 2.5307301139160017 9 0.953482398509447 2.528321067979815 >10 8.94175386816939 50.79663756032971 >50 0.16998021439101169 3.2503914373176657 >100 0.019765141208257172 0.8492853074717078 >500 7.906056483302869E-4 0.2296750721796774 >1k 0.0015812112966605738 0.5581150841201897 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1254 0.29275672243207534 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1142 0.266609391560949 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 986 0.23018989499045153 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011672915567467117 0.0 2 0.0 0.0 0.0 0.05369541161034874 0.0 3 0.0 0.0 0.0 0.06606870211186389 0.0 4 0.0 0.0 0.0 0.0959513659645797 0.0 5 0.0 0.0 0.0 0.15548323535866201 0.0 6 0.0 0.0 0.0 0.2259876453861634 0.0 7 0.0 0.0 0.0 0.28085034855325886 0.0 8 0.0 0.0 0.0 0.6083923593763861 0.0 9 0.0 0.0 0.0 0.7480004295632929 0.0 10 0.0 0.0 0.0 0.9807583659785872 0.0 11 0.0 0.0 0.0 1.1691592232375065 0.0 12 0.0 0.0 0.0 1.3559258723169803 0.0 13 0.0 0.0 0.0 1.4289983237693245 0.0 14 0.0 0.0 0.0 1.4521106965929094 0.0 15 0.0 0.0 0.0 1.4950670258811884 0.0 16 0.0 0.0 0.0 1.5872830588641786 0.0 17 0.0 0.0 0.0 1.7166189633517144 0.0 18 0.0 0.0 0.0 1.9220622773391356 0.0 19 0.0 0.0 0.0 1.9937339789233837 0.0 20 0.0 0.0 0.0 2.0712421382913653 0.0 21 0.0 0.0 0.0 2.176765295021268 0.0 22 0.0 0.0 0.0 2.2813546185057736 0.0 23 0.0 0.0 0.0 2.4060213567663222 0.0 24 0.0 0.0 0.0 2.4893659739180376 0.0 25 0.0 0.0 0.0 2.5596369256341895 0.0 26 0.0 0.0 0.0 2.6317755438411363 0.0 27 0.0 0.0 0.0 2.7022799538686377 0.0 28 0.0 0.0 0.0 2.780255029859318 0.0 29 0.0 0.0 0.0 2.8575297309159504 0.0 30 0.0 0.0 0.0 2.9728581367225253 0.0 31 0.0 0.0 0.0 3.0797820433205243 0.0 32 0.0 0.0 0.0 3.167562368387877 0.0 33 0.0 0.0 0.0 3.2546423185211815 0.0 34 0.0 0.0 0.0 3.3522278926652067 0.0 35 0.0 0.0 0.0 3.4897348380499693 0.0 36 0.0 0.0 0.0 3.5884877037507414 0.0 37 0.0 0.0 0.0 3.6921431939898492 0.0 38 0.0 0.0 0.0 3.7871607267090317 0.0 39 0.0 0.0 0.0 3.891049675259489 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 85 0.0 45.0 25 TTTAGCG 35 1.209537E-7 45.0 1 TTAATCG 40 6.7975634E-9 45.0 20 GGTAAGT 25 3.8866936E-5 45.0 8 GTACAAC 20 7.0283253E-4 45.0 21 ATAGGCC 40 6.7975634E-9 45.0 5 ACGTTAT 20 7.0283253E-4 45.0 15 CGCATCG 20 7.0283253E-4 45.0 21 CGTTGAT 40 6.7975634E-9 45.0 25 GATCCAC 20 7.0283253E-4 45.0 23 TTACTAC 20 7.0283253E-4 45.0 27 CAATTGC 25 3.8866936E-5 45.0 25 CGATTCG 25 3.8866936E-5 45.0 10 TAACGGC 20 7.0283253E-4 45.0 18 ATCGTTG 50 2.1827873E-11 45.0 23 CGTTATC 20 7.0283253E-4 45.0 16 ACTAGGT 20 7.0283253E-4 45.0 4 CCGTAAC 20 7.0283253E-4 45.0 15 GTGTCGA 20 7.0283253E-4 45.0 1 TGTTACG 25 3.8866936E-5 45.0 1 >>END_MODULE