SRR1545755_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545755_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	543715
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1096	0.20157619341015054	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1013	0.1863108429967906	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	803	0.14768766725214497	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACGGG	50	2.1827873E-11	45.000004	3
ATAACGG	25	3.8880837E-5	45.000004	2
CGGGTAC	20	7.0300046E-4	45.0	6
ATCTCGT	45	3.8380676E-10	45.0	19
CGAACTA	20	7.0300046E-4	45.0	38
TACGGGA	55	1.8189894E-12	45.0	4
GCGCATA	20	7.0300046E-4	45.0	1
TACGCAT	20	7.0300046E-4	45.0	45
TAGTGCG	20	7.0300046E-4	45.0	1
CGTTAAG	30	2.1633841E-6	44.999996	2
AGGCGAT	360	0.0	44.375	7
CGACGGT	120	0.0	43.124996	28
GACGGTC	120	0.0	43.124996	29
CGGTCTA	115	0.0	43.043476	31
CGTTTTA	650	0.0	42.923073	1
CGTTTTT	855	0.0	42.631577	1
TCACGAC	130	0.0	41.53846	25
ACGGTCT	125	0.0	41.4	30
GCGCGTC	50	1.0786607E-9	40.500004	38
TGCGCGT	50	1.0786607E-9	40.500004	37