##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545755_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 543715 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.004781916996958 31.0 31.0 33.0 30.0 33.0 2 31.159846610816327 31.0 31.0 33.0 30.0 34.0 3 31.121718179560983 31.0 31.0 34.0 28.0 34.0 4 35.135274914247354 35.0 35.0 37.0 33.0 37.0 5 32.84187487930257 35.0 35.0 37.0 28.0 37.0 6 34.01772987686564 35.0 35.0 37.0 28.0 37.0 7 15.273121028479995 0.0 0.0 35.0 0.0 37.0 8 24.88976945642478 17.0 17.0 35.0 17.0 37.0 9 32.67733831143154 32.0 32.0 37.0 27.0 39.0 10 35.43410426418252 37.0 34.0 37.0 32.0 39.0 11 36.420696504602596 37.0 35.0 39.0 32.0 39.0 12 36.35198771415172 37.0 35.0 39.0 32.0 39.0 13 36.10542655619212 37.0 35.0 39.0 32.0 39.0 14 37.14092493309914 39.0 36.0 40.0 32.0 41.0 15 37.45722299366396 39.0 36.0 41.0 32.0 41.0 16 37.478905308847466 39.0 36.0 41.0 32.0 41.0 17 37.4238286602356 39.0 35.0 41.0 32.0 41.0 18 37.352949615147644 39.0 36.0 41.0 32.0 41.0 19 37.315748140110166 39.0 36.0 40.0 32.0 41.0 20 37.458102130711865 39.0 35.0 41.0 32.0 41.0 21 37.32645227738797 39.0 35.0 41.0 32.0 41.0 22 37.39655518056335 39.0 35.0 41.0 32.0 41.0 23 37.37662010428257 39.0 35.0 41.0 32.0 41.0 24 37.22924142243639 39.0 35.0 41.0 32.0 41.0 25 36.96179248319432 39.0 35.0 40.0 31.0 41.0 26 36.867290768141395 39.0 35.0 40.0 31.0 41.0 27 36.788940897345114 39.0 35.0 40.0 31.0 41.0 28 36.686861683050864 38.0 35.0 40.0 31.0 41.0 29 36.664883256853315 38.0 35.0 40.0 31.0 41.0 30 36.41389514727385 38.0 35.0 40.0 30.0 41.0 31 36.32251823105855 38.0 35.0 40.0 30.0 41.0 32 36.27016543593611 38.0 35.0 40.0 30.0 41.0 33 36.13806313969635 38.0 35.0 40.0 30.0 41.0 34 35.99581398342882 38.0 35.0 40.0 29.0 41.0 35 35.8416468186458 38.0 35.0 40.0 29.0 41.0 36 35.64951675050348 38.0 34.0 40.0 28.0 41.0 37 35.51848854638919 38.0 34.0 40.0 27.0 41.0 38 35.404552017141334 38.0 34.0 40.0 27.0 41.0 39 35.31426574584111 38.0 34.0 40.0 27.0 41.0 40 35.157297481217185 38.0 34.0 40.0 26.0 41.0 41 35.017831032802114 38.0 34.0 40.0 26.0 41.0 42 34.969548384723616 38.0 34.0 40.0 25.0 41.0 43 34.89552247041189 38.0 34.0 40.0 25.0 41.0 44 34.57819261929504 37.0 33.0 40.0 24.0 41.0 45 34.506793080933946 37.0 33.0 40.0 24.0 41.0 46 34.499344325611766 37.0 33.0 40.0 24.0 41.0 47 34.44639930846123 37.0 33.0 40.0 24.0 41.0 48 34.403693111280724 37.0 33.0 40.0 24.0 41.0 49 34.301786781677905 37.0 33.0 40.0 24.0 41.0 50 34.190266959712346 36.0 33.0 40.0 24.0 41.0 51 34.00636730640133 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 3.0 13 1.0 14 12.0 15 20.0 16 51.0 17 134.0 18 270.0 19 580.0 20 938.0 21 1545.0 22 2417.0 23 3525.0 24 5178.0 25 6697.0 26 8081.0 27 9293.0 28 10311.0 29 12504.0 30 15399.0 31 19905.0 32 26706.0 33 39307.0 34 49997.0 35 55219.0 36 67298.0 37 101556.0 38 87957.0 39 18808.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.234874888498574 24.676346983254092 28.451670452350957 13.63710767589638 2 32.87420799499738 24.18822360979557 30.545414417479744 12.392153977727302 3 31.36919158014769 23.83932758890227 31.798276670682252 12.993204160267787 4 28.317592856551688 27.435513090497782 28.549699750788555 15.697194302161979 5 21.168810865986774 36.99714004579605 27.66780390461915 14.166245183598026 6 20.221439540935968 42.48696467818618 27.09838794221237 10.193207838665478 7 38.86061631553295 56.79078193538894 3.528135144331129 0.8204666047469722 8 88.88388218092199 3.1045676503315156 6.195525229210156 1.8160249395363381 9 84.07879127851908 4.694003292165933 7.850620269810471 3.37658515950452 10 47.343920988017615 24.81281553755184 14.614274022235914 13.228989452194623 11 40.92015118214506 22.762292745280156 20.573646119750236 15.74390995282455 12 37.367554693175656 21.598079876405837 25.706482256329146 15.327883174089365 13 23.584046789218615 33.709020350735216 26.01307670378783 16.69385615625833 14 17.70467984146106 37.53271474945514 28.280808879652025 16.48179652943178 15 16.62672539841645 24.007246443449233 42.06376502395556 17.30226313417875 16 18.746769907028497 18.758356859751892 41.89271953137214 20.602153701847474 17 19.050237716450713 19.08886089219536 29.282804410398832 32.578096980955095 18 21.767286170144285 24.024167072823076 32.67925291742917 21.52929383960347 19 28.888664097918948 24.946341373697617 25.298915792280884 20.86607873610255 20 30.80418969496887 23.698444957376566 24.315496169868407 21.181869177786155 21 24.291770504768124 26.841084023799233 27.935959096217687 20.931186375214956 22 23.74093045069568 23.414472655711172 25.801384916730274 27.043211976862878 23 21.558353181354203 28.95395565691585 25.158952760177666 24.328738401552283 24 21.56092805973718 24.831023606117174 34.52139448056427 19.08665385358138 25 21.138280165160054 24.257193566482442 32.67318356124073 21.93134270711678 26 19.08003273773944 30.7140689515647 27.167909658552738 23.037988652143127 27 20.003494477805468 29.936639599790333 28.578943012423792 21.480922909980414 28 18.51190421452415 27.476895064509897 34.54438446612655 19.466816254839394 29 18.759644298943382 25.492767350542106 34.24073273681984 21.506855613694675 30 20.94148588874686 27.717646193318192 31.064252411649484 20.276615506285463 31 28.393000009195994 25.84387041004938 25.118306465703537 20.644823115051082 32 28.54933191101956 26.132072869058238 26.06310291237137 19.25549230755083 33 27.82340012690472 25.65903092612858 25.293582115630432 21.22398683133627 34 21.22361899156727 26.4193557286446 27.807399096953368 24.549626182834757 35 21.7437444249285 24.988642947132227 30.11651324682968 23.15109938110959 36 28.966830048830726 25.521091012754844 25.368621428505744 20.143457509908682 37 22.126849544338487 30.99951261230608 26.334200822121883 20.53943702123355 38 22.278031689396098 31.215434556707102 24.31310521136993 22.193428542526874 39 22.14064353567586 28.658948162180554 25.384806378341594 23.815601923801992 40 24.36202790064648 24.841507039533578 27.180784050467615 23.615681009352326 41 20.05352068638901 24.390535482743715 27.30695309123346 28.24899073963382 42 22.399602733049484 27.079628113993543 24.00779820310273 26.512970949854243 43 22.086203249864358 26.073770265672273 25.499572386268543 26.340454098194826 44 21.30491158051553 27.867724819068812 28.690030622660768 22.13733297775489 45 20.40958958277774 32.07434041731422 24.80325170355793 22.71281829635011 46 22.301573434611882 30.33979198661063 27.048361733628834 20.310272845148653 47 22.62766338982739 27.41767286170144 26.803932207130575 23.15073154134059 48 22.38470522240512 26.053171238608464 28.590529965147184 22.971593573839236 49 21.63284073457602 25.200702573958782 31.099748949357657 22.06670774210754 50 21.176351581251208 29.743523721067106 27.20763635360437 21.872488344077322 51 21.068942368704192 31.031146832439788 25.7112641733261 22.18864662552992 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 264.0 1 554.0 2 844.0 3 2473.5 4 4103.0 5 3088.5 6 2074.0 7 2068.5 8 2063.0 9 2102.5 10 2142.0 11 2123.0 12 2104.0 13 2037.5 14 1971.0 15 1833.0 16 1695.0 17 1753.5 18 1812.0 19 1745.0 20 1678.0 21 1893.0 22 2108.0 23 2349.0 24 2590.0 25 3083.0 26 4384.5 27 5193.0 28 6298.0 29 7403.0 30 8461.5 31 9520.0 32 10937.0 33 12354.0 34 13434.5 35 14515.0 36 16607.5 37 18700.0 38 22815.0 39 26930.0 40 32776.5 41 38623.0 42 41430.5 43 44238.0 44 44594.5 45 44951.0 46 44480.5 47 44010.0 48 42429.0 49 40848.0 50 39211.5 51 37575.0 52 34878.0 53 32181.0 54 30239.5 55 28298.0 56 27049.5 57 25801.0 58 24113.5 59 22426.0 60 20246.5 61 18067.0 62 15650.0 63 13233.0 64 11340.0 65 9447.0 66 7961.0 67 6475.0 68 5806.5 69 5138.0 70 4446.5 71 3755.0 72 3108.5 73 2462.0 74 1863.5 75 975.0 76 685.0 77 483.5 78 282.0 79 207.0 80 132.0 81 113.0 82 94.0 83 68.5 84 43.0 85 35.0 86 27.0 87 17.5 88 8.0 89 7.0 90 6.0 91 4.5 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 543715.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.32419311185335 #Duplication Level Percentage of deduplicated Percentage of total 1 67.06657736522426 22.34939575469786 2 8.946249734471865 5.962531075568143 3 4.757024281816542 4.755719874150897 4 3.3336436319239127 4.443639366253304 5 2.479178211177284 4.130830673398548 6 1.8759728910816298 3.750916973700364 7 1.5601282015895117 3.639300942831215 8 1.323527474899464 3.5284388129914706 9 1.1386243726023282 3.4149364627016565 >10 7.428646222164144 40.88703835904959 >50 0.07014990588049995 1.540865795331056 >100 0.01863356874949813 1.0645616594738652 >500 5.480461396911216E-4 0.14665345900797971 >1k 0.0010960922793822432 0.38517079084412104 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1096 0.20157619341015054 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1013 0.1863108429967906 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 803 0.14768766725214497 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00864423457142069 0.0 2 0.0 0.0 0.0 0.03770357632215407 0.0 3 0.0 0.0 0.0 0.04634781089357476 0.0 4 0.0 0.0 0.0 0.06639507830389083 0.0 5 0.0 0.0 0.0 0.10593785347102802 0.0 6 0.0 0.0 0.0 0.16405653697249478 0.0 7 0.0 0.0 0.0 0.19992091444966573 0.0 8 0.0 0.0 0.0 0.4428790818719366 0.0 9 0.0 0.0 0.0 0.5493686949964596 0.0 10 0.0 0.0 0.0 0.7314493806497889 0.0 11 0.0 0.0 0.0 0.8749068905584727 0.0 12 0.0 0.0 0.0 1.0126628840477088 0.0 13 0.0 0.0 0.0 1.0733564459321518 0.0 14 0.0 0.0 0.0 1.0965303513789393 0.0 15 0.0 0.0 0.0 1.1320268890871137 0.0 16 0.0 0.0 0.0 1.2078018815004183 0.0 17 0.0 0.0 0.0 1.2925889482541404 0.0 18 0.0 0.0 0.0 1.450024369384696 0.0 19 0.0 0.0 0.0 1.5116375306916308 0.0 20 0.0 0.0 0.0 1.571227573269084 0.0 21 0.0 0.0 0.0 1.6510488031413517 0.0 22 0.0 0.0 0.0 1.735468030126077 0.0 23 0.0 0.0 0.0 1.8294510911047148 0.0 24 0.0 0.0 0.0 1.9092723209769824 0.0 25 0.0 0.0 0.0 1.9760352390498699 0.0 26 0.0 0.0 0.0 2.0413267980467706 0.0 27 0.0 0.0 0.0 2.1068022769281702 0.0 28 0.0 0.0 0.0 2.1739330347700543 0.0 29 0.0 0.0 0.0 2.246213549377891 0.0 30 0.0 0.0 0.0 2.3458981267759764 0.0 31 0.0 0.0 0.0 2.4321565526056848 0.0 32 0.0 0.0 0.0 2.5097707438639727 0.0 33 0.0 0.0 0.0 2.5940060509642 0.0 34 0.0 0.0 0.0 2.6844946341373697 0.0 35 0.0 0.0 0.0 2.8102958351342155 0.0 36 0.0 0.0 0.0 2.9009683381918836 0.0 37 0.0 0.0 0.0 2.997158437784501 0.0 38 0.0 0.0 0.0 3.0959234157600948 0.0 39 0.0 0.0 0.0 3.222460296294934 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGGG 50 2.1827873E-11 45.000004 3 ATAACGG 25 3.8880837E-5 45.000004 2 CGGGTAC 20 7.0300046E-4 45.0 6 ATCTCGT 45 3.8380676E-10 45.0 19 CGAACTA 20 7.0300046E-4 45.0 38 TACGGGA 55 1.8189894E-12 45.0 4 GCGCATA 20 7.0300046E-4 45.0 1 TACGCAT 20 7.0300046E-4 45.0 45 TAGTGCG 20 7.0300046E-4 45.0 1 CGTTAAG 30 2.1633841E-6 44.999996 2 AGGCGAT 360 0.0 44.375 7 CGACGGT 120 0.0 43.124996 28 GACGGTC 120 0.0 43.124996 29 CGGTCTA 115 0.0 43.043476 31 CGTTTTA 650 0.0 42.923073 1 CGTTTTT 855 0.0 42.631577 1 TCACGAC 130 0.0 41.53846 25 ACGGTCT 125 0.0 41.4 30 GCGCGTC 50 1.0786607E-9 40.500004 38 TGCGCGT 50 1.0786607E-9 40.500004 37 >>END_MODULE