SRR1545751_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545751_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	400158
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1351	0.33761664142663644	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1247	0.31162690737158827	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1004	0.250900894146812	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGGAC	20	7.0277683E-4	45.000004	16
AGGTATG	45	3.8380676E-10	45.000004	7
CGGGTGG	20	7.0277683E-4	45.000004	6
TTAGGCG	40	6.7957444E-9	45.000004	5
TCGCAAG	20	7.0277683E-4	45.000004	2
GTCGAAT	20	7.0277683E-4	45.000004	37
TTGTGCA	20	7.0277683E-4	45.000004	1
ATAGGCG	40	6.7957444E-9	45.000004	5
CACGGGC	20	7.0277683E-4	45.000004	4
CACGGGA	35	1.2092823E-7	45.000004	4
TCCGATT	20	7.0277683E-4	45.000004	35
GAGTAAT	20	7.0277683E-4	45.000004	19
GGTCCAC	20	7.0277683E-4	45.000004	21
TAAACGG	20	7.0277683E-4	45.000004	2
CGCGCAT	20	7.0277683E-4	45.000004	42
TTACTAC	30	2.1619417E-6	45.000004	27
CGATTGC	20	7.0277683E-4	45.000004	10
AGTGGCC	20	7.0277683E-4	45.000004	15
GCGCATT	20	7.0277683E-4	45.000004	43
TGTGCGG	40	6.7957444E-9	45.000004	2