##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545749_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 396424 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97653017980748 31.0 31.0 33.0 30.0 33.0 2 31.14152271305471 31.0 31.0 33.0 30.0 34.0 3 31.079092083224023 31.0 31.0 34.0 28.0 34.0 4 35.063951728452366 35.0 35.0 37.0 32.0 37.0 5 32.701241599903135 35.0 35.0 37.0 28.0 37.0 6 33.92125855144996 35.0 35.0 37.0 28.0 37.0 7 15.933964643916614 0.0 0.0 35.0 0.0 37.0 8 25.213579399834522 17.0 17.0 35.0 17.0 37.0 9 32.74467237099671 32.0 32.0 37.0 27.0 39.0 10 35.446590014731704 37.0 34.0 37.0 32.0 39.0 11 36.39884568038262 37.0 35.0 39.0 32.0 39.0 12 36.39886586079551 37.0 35.0 39.0 32.0 39.0 13 36.25012612758057 38.0 35.0 39.0 32.0 39.0 14 37.2596638952233 39.0 36.0 40.0 32.0 41.0 15 37.513556192359694 39.0 36.0 41.0 32.0 41.0 16 37.50270922043065 39.0 36.0 41.0 32.0 41.0 17 37.447868948398686 39.0 36.0 41.0 32.0 41.0 18 37.39565969769742 39.0 36.0 40.0 32.0 41.0 19 37.34729229310032 39.0 36.0 40.0 32.0 41.0 20 37.45178394849959 39.0 36.0 41.0 32.0 41.0 21 37.341212943716826 39.0 35.0 41.0 32.0 41.0 22 37.391260367687124 39.0 35.0 41.0 32.0 41.0 23 37.358641252800034 39.0 35.0 41.0 32.0 41.0 24 37.18641404153129 39.0 35.0 41.0 32.0 41.0 25 36.92481030411882 39.0 35.0 40.0 31.0 41.0 26 36.819733416745706 39.0 35.0 40.0 31.0 41.0 27 36.76135904990616 39.0 35.0 40.0 31.0 41.0 28 36.64978406958206 38.0 35.0 40.0 31.0 41.0 29 36.583857183217965 38.0 35.0 40.0 31.0 41.0 30 36.2986776784453 38.0 35.0 40.0 30.0 41.0 31 36.170796924505076 38.0 35.0 40.0 30.0 41.0 32 36.08129427078078 38.0 35.0 40.0 30.0 41.0 33 35.90211742982262 38.0 35.0 40.0 29.0 41.0 34 35.69271033035336 38.0 35.0 40.0 27.0 41.0 35 35.47945886222832 38.0 34.0 40.0 27.0 41.0 36 35.288390712973985 38.0 34.0 40.0 25.0 41.0 37 35.1565369402458 38.0 34.0 40.0 25.0 41.0 38 35.00175821847315 38.0 34.0 40.0 25.0 41.0 39 34.87579208120598 38.0 34.0 40.0 24.0 41.0 40 34.73937501261276 38.0 34.0 40.0 24.0 41.0 41 34.59275926785462 38.0 33.0 40.0 23.0 41.0 42 34.56786672855327 38.0 33.0 40.0 23.0 41.0 43 34.481711500817305 38.0 33.0 40.0 23.0 41.0 44 34.26518828325228 37.0 33.0 40.0 23.0 41.0 45 34.16253556797772 37.0 33.0 40.0 23.0 41.0 46 34.13097592476742 37.0 33.0 40.0 23.0 41.0 47 34.07124694771255 37.0 33.0 40.0 23.0 41.0 48 33.97601557927875 37.0 33.0 40.0 23.0 41.0 49 33.87263636914011 36.0 33.0 40.0 23.0 41.0 50 33.753776259762276 36.0 33.0 40.0 22.0 41.0 51 33.58467196738845 36.0 32.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 10.0 15 29.0 16 47.0 17 110.0 18 230.0 19 462.0 20 842.0 21 1371.0 22 2154.0 23 3048.0 24 4284.0 25 5857.0 26 6869.0 27 7531.0 28 8061.0 29 9333.0 30 11264.0 31 14571.0 32 18848.0 33 27043.0 34 34740.0 35 39767.0 36 50422.0 37 74454.0 38 61503.0 39 13568.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.999142332452124 23.118176497891145 27.03847395717716 14.844207212479569 2 34.74310334389442 23.080590478881195 29.751225960083143 12.425080217141243 3 31.983431881016283 23.169384295602686 32.08761326256735 12.759570560813675 4 28.012683389502147 27.255917906080356 29.2426795552237 15.488719149193791 5 21.26006498092951 36.44910499868828 27.943313220188486 14.347516800193732 6 20.18772829092083 41.74469759651282 28.373408269933204 9.69416584263314 7 39.222145985106856 54.96362480576352 4.884164430004238 0.930064779125381 8 86.36207696809477 3.4455532460194136 8.170796924505074 2.0215728613807435 9 81.27787419530603 5.156095493713801 10.092728997235284 3.4733013137448796 10 43.36846406877485 26.414394688515326 16.84484289548564 13.372298347224184 11 35.97511755090509 24.067412669263213 23.40625189191371 16.55121788791799 12 32.735404516376406 22.250166488406354 28.711682441022745 16.3027465541945 13 24.166044437269186 29.605926987266155 29.28581518777874 16.94221338768591 14 19.529846830666155 32.61634008031805 30.65858777470587 17.19522531430993 15 17.807953100720443 24.312352430730733 39.91736120921034 17.962333259338486 16 20.675085262244465 19.82725566565092 38.76430286763667 20.733356204467942 17 20.639265029362498 20.126682541924808 30.30013319072508 28.93391923798761 18 22.889633321897765 23.308124634230015 33.18593223417351 20.616309809698706 19 28.037656650455066 25.171281254414463 26.512269691037876 20.278792404092588 20 28.20843339454725 24.460930720642544 26.263546102153253 21.067089782656954 21 24.697041551470143 25.925776441385988 29.5055294331322 19.871652574011662 22 23.574506084394486 23.11893326337457 27.944069985671906 25.36249066655904 23 21.673763445200088 27.777329324157975 27.73444594676407 22.81446128387787 24 21.664430004237886 25.62584505478982 33.78806530381612 18.92165963715618 25 23.011220309567534 24.381974855205538 31.283171553689986 21.323633281536942 26 20.04797893164894 27.884033257320446 28.440760397957742 23.62722741307287 27 20.332270498254395 27.242043872217625 30.356638346820574 22.069047282707405 28 19.5394325267895 26.052156277117426 34.15282626682542 20.255584929267652 29 20.386253102738483 25.745666256331607 32.93418158335519 20.933899057574717 30 22.65099993945876 26.027183016164514 31.561156741266927 19.760660303109802 31 27.994016507577747 24.634482271507274 26.551873751336952 20.819627469578027 32 27.587381187819105 25.32490464754909 26.87324682663007 20.214467338001736 33 26.414646943676466 24.45411983129175 27.068240066191755 22.06299315884003 34 21.283020200593302 26.330645975016647 29.449528787358993 22.936805037031057 35 22.133120093637114 24.95812564325066 30.15861804532521 22.750136217787016 36 28.143099307811838 25.42832926361673 25.994894355538516 20.433677073032914 37 22.504187435674933 29.83043408068129 26.743335418642666 20.92204306500111 38 22.67975702782879 30.133644784372287 25.440942021673763 21.74565616612516 39 21.79661170867556 27.823744273807844 26.277924646338263 24.101719371178334 40 23.553568906019816 25.295895304017918 27.69534639678728 23.455189393174987 41 20.98031400722459 23.93472645450326 28.62944725849091 26.455512279781246 42 22.179535043286986 26.64823522289266 25.853379210138637 25.318850523681714 43 21.700502492280993 25.765846669222853 27.272062236393356 25.261588602102798 44 21.717655843238553 26.846003269226888 29.11150687143059 22.32483401610397 45 21.225001513530966 29.579187940185257 26.52135087683894 22.67445966944484 46 22.926210320263152 27.934232034387424 28.074990414303873 21.064567231045547 47 22.51074606986459 27.123736201642686 27.621435634573082 22.74408209391964 48 21.681835610356586 26.891661453393333 29.224012673299292 22.202490262950782 49 22.0423082356265 26.121526446431094 30.005246907351722 21.83091841059068 50 20.984350089802835 28.360038746392753 28.599933404637458 22.055677759166954 51 21.092063043609873 29.182895082033376 27.83585252154259 21.88918935281416 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 226.0 1 410.5 2 595.0 3 2664.0 4 4733.0 5 3437.0 6 2141.0 7 2133.0 8 2125.0 9 2148.5 10 2172.0 11 2107.0 12 2042.0 13 2030.0 14 2018.0 15 1889.0 16 1760.0 17 1729.0 18 1698.0 19 1771.0 20 1844.0 21 1886.0 22 1928.0 23 2115.5 24 2303.0 25 2655.5 26 3476.5 27 3945.0 28 4633.0 29 5321.0 30 6282.5 31 7244.0 32 8505.5 33 9767.0 34 10448.0 35 11129.0 36 12184.0 37 13239.0 38 15592.5 39 17946.0 40 21024.0 41 24102.0 42 25852.0 43 27602.0 44 28387.0 45 29172.0 46 29821.0 47 30470.0 48 29978.0 49 29486.0 50 28138.0 51 26790.0 52 25175.0 53 23560.0 54 22539.5 55 21519.0 56 20456.5 57 19394.0 58 18402.5 59 17411.0 60 15783.0 61 14155.0 62 12504.5 63 10854.0 64 9452.0 65 8050.0 66 6790.0 67 5530.0 68 4847.5 69 4165.0 70 3554.0 71 2943.0 72 2439.5 73 1936.0 74 1513.0 75 797.5 76 505.0 77 378.5 78 252.0 79 188.5 80 125.0 81 98.5 82 72.0 83 53.5 84 35.0 85 24.5 86 14.0 87 9.5 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 396424.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.042894593136 #Duplication Level Percentage of deduplicated Percentage of total 1 66.45266978779092 28.603152611083576 2 11.072479770882108 9.531831593254184 3 6.039586957534034 7.798839143976491 4 4.098720930110595 7.0568325184572265 5 2.930250748266958 6.306323704455628 6 2.2444733027411163 5.796517667219621 7 1.614675053563022 4.865020169287557 8 1.2631422407229884 4.349543865886176 9 0.9686078020008315 3.752251517124984 >10 3.2719883023486434 19.282435740150756 >50 0.025221884779283575 0.7314068889305329 >100 0.017010108339516734 1.304262336284127 >500 0.0 0.0 >1k 0.0011731109199666714 0.6215822438891833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1272 0.3208685649708393 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1190 0.3001836417573104 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010090206445623877 0.0 2 0.0 0.0 0.0 0.032540915787137005 0.0 3 0.0 0.0 0.0 0.04389239803846387 0.0 4 0.0 0.0 0.0 0.06003672835146207 0.0 5 0.0 0.0 0.0 0.10392912638992594 0.0 6 0.0 0.0 0.0 0.17153350957560592 0.0 7 0.0 0.0 0.0 0.21492139729178858 0.0 8 0.0 0.0 0.0 0.4833208887453837 0.0 9 0.0 0.0 0.0 0.6243315238229774 0.0 10 0.0 0.0 0.0 0.8450547898209997 0.0 11 0.0 0.0 0.0 0.9878312110265776 0.0 12 0.0 0.0 0.0 1.124553508364781 0.0 13 0.0 0.0 0.0 1.1780316025265878 0.0 14 0.0 0.0 0.0 1.2040138841240693 0.0 15 0.0 0.0 0.0 1.2294916553992694 0.0 16 0.0 0.0 0.0 1.2907896595564345 0.0 17 0.0 0.0 0.0 1.3737816075716909 0.0 18 0.0 0.0 0.0 1.4978911468528646 0.0 19 0.0 0.0 0.0 1.5523782616592336 0.0 20 0.0 0.0 0.0 1.6083789074324462 0.0 21 0.0 0.0 0.0 1.681028393840938 0.0 22 0.0 0.0 0.0 1.762506810889351 0.0 23 0.0 0.0 0.0 1.8596250479284806 0.0 24 0.0 0.0 0.0 1.9418602304603152 0.0 25 0.0 0.0 0.0 1.9981131313946683 0.0 26 0.0 0.0 0.0 2.064203983613505 0.0 27 0.0 0.0 0.0 2.1376102355054183 0.0 28 0.0 0.0 0.0 2.211268742558473 0.0 29 0.0 0.0 0.0 2.2846749944503864 0.0 30 0.0 0.0 0.0 2.396424030835671 0.0 31 0.0 0.0 0.0 2.477650192722943 0.0 32 0.0 0.0 0.0 2.571993622989526 0.0 33 0.0 0.0 0.0 2.6615442051944385 0.0 34 0.0 0.0 0.0 2.758662442233568 0.0 35 0.0 0.0 0.0 2.8772223679696487 0.0 36 0.0 0.0 0.0 2.9791334530704496 0.0 37 0.0 0.0 0.0 3.0742336488204547 0.0 38 0.0 0.0 0.0 3.197586422618207 0.0 39 0.0 0.0 0.0 3.4016608479809496 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 35 1.2092278E-7 45.000004 5 CGCTATG 35 1.2092278E-7 45.000004 24 AGGTACC 105 0.0 45.0 7 TACTCGC 25 3.886166E-5 45.0 45 TCGTAAG 25 3.886166E-5 45.0 2 ATGGTCG 25 3.886166E-5 45.0 44 CGAGAAT 20 7.02769E-4 45.0 45 ATAACGG 20 7.02769E-4 45.0 2 ATAACGC 40 6.7957444E-9 45.0 11 TCGACTA 20 7.02769E-4 45.0 1 AGGCGAT 260 0.0 44.134617 7 CGTTTTA 685 0.0 43.357666 1 CGTTTTT 910 0.0 42.774723 1 GGTACCT 175 0.0 42.42857 8 CGGTAGT 75 0.0 42.000004 12 CGGTCTA 65 0.0 41.538464 31 TAACGGG 60 3.6379788E-12 41.250004 3 ATCCTGC 175 0.0 41.142857 20 GCAAGGA 510 0.0 41.02941 4 ATAGGCG 55 6.002665E-11 40.909092 5 >>END_MODULE