##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545748_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1501844 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.464946425860475 31.0 31.0 33.0 30.0 34.0 2 31.65532571958206 31.0 31.0 34.0 30.0 34.0 3 31.66683490429099 31.0 31.0 34.0 30.0 34.0 4 35.60565811096226 37.0 35.0 37.0 33.0 37.0 5 27.090789056653023 35.0 25.0 37.0 0.0 37.0 6 31.319900735362662 35.0 26.0 37.0 17.0 37.0 7 15.028529594285425 0.0 0.0 32.0 0.0 37.0 8 25.100424544759644 17.0 17.0 35.0 17.0 37.0 9 33.14442112496371 32.0 32.0 37.0 28.0 39.0 10 35.92372443476153 37.0 35.0 39.0 32.0 39.0 11 36.93034562844077 38.0 37.0 39.0 34.0 39.0 12 37.14137620152293 39.0 37.0 39.0 34.0 39.0 13 36.84721515683387 39.0 37.0 39.0 33.0 39.0 14 38.17356796045395 40.0 37.0 41.0 33.0 41.0 15 38.38462583330892 40.0 38.0 41.0 34.0 41.0 16 38.38091373005452 40.0 37.0 41.0 34.0 41.0 17 38.37292421849406 40.0 37.0 41.0 34.0 41.0 18 38.33820822935005 40.0 37.0 41.0 34.0 41.0 19 38.28178026479448 40.0 37.0 41.0 34.0 41.0 20 38.31280013103891 40.0 37.0 41.0 34.0 41.0 21 38.186623244491436 40.0 37.0 41.0 34.0 41.0 22 38.05635072617396 40.0 36.0 41.0 34.0 41.0 23 37.92341814462754 40.0 36.0 41.0 34.0 41.0 24 37.74622397532633 40.0 35.0 41.0 33.0 41.0 25 37.55641398174511 39.0 35.0 41.0 33.0 41.0 26 37.29778791938444 39.0 35.0 40.0 33.0 41.0 27 37.1035526992151 39.0 35.0 40.0 32.0 41.0 28 37.10272505000519 39.0 35.0 40.0 32.0 41.0 29 36.97968963487553 39.0 35.0 40.0 32.0 41.0 30 36.73757660582591 39.0 35.0 40.0 31.0 41.0 31 36.530452563648424 38.0 35.0 40.0 31.0 41.0 32 36.29957505573149 38.0 35.0 40.0 30.0 41.0 33 36.01314850277392 38.0 35.0 40.0 30.0 41.0 34 35.67736862150796 38.0 35.0 40.0 28.0 41.0 35 35.41693677905295 38.0 35.0 40.0 26.0 41.0 36 35.20772330548313 38.0 35.0 40.0 25.0 41.0 37 35.11262221642195 38.0 34.0 40.0 25.0 41.0 38 34.912624080796675 38.0 34.0 40.0 24.0 41.0 39 34.79721395830725 38.0 34.0 40.0 24.0 41.0 40 34.557216328726554 38.0 34.0 40.0 23.0 41.0 41 34.31053092065488 38.0 34.0 40.0 23.0 40.0 42 34.30512556563797 38.0 33.0 40.0 23.0 40.0 43 34.15940603684537 37.0 33.0 40.0 22.0 40.0 44 33.93331730858864 37.0 33.0 40.0 22.0 40.0 45 33.766769384836245 37.0 33.0 40.0 22.0 40.0 46 33.67402273471812 36.0 33.0 39.0 22.0 40.0 47 33.49937077352907 36.0 33.0 39.0 21.0 40.0 48 33.37840681189258 36.0 33.0 39.0 21.0 40.0 49 33.22228007702531 36.0 32.0 39.0 20.0 40.0 50 33.34394384503317 36.0 33.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 6.0 13 12.0 14 18.0 15 39.0 16 97.0 17 285.0 18 651.0 19 1299.0 20 2527.0 21 4222.0 22 6678.0 23 10243.0 24 15791.0 25 23051.0 26 29015.0 27 30434.0 28 30052.0 29 31735.0 30 37170.0 31 47413.0 32 63182.0 33 98686.0 34 115977.0 35 153897.0 36 222550.0 37 379972.0 38 153897.0 39 42943.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.584454843512376 21.727689427130915 25.343511043756873 17.344344685599836 2 38.33613877340123 22.17826884816266 27.454316160666487 12.031276217769623 3 31.12194076082469 22.42676336556926 34.08090320965427 12.370392663951781 4 26.627599138126197 25.96960802853026 32.20427687562756 15.19851595771598 5 16.98964739347096 47.07053462277041 24.54429354846442 11.395524435294211 6 20.09895834720517 39.62648584007394 30.780360676608222 9.494195136112673 7 37.85759373143948 55.5115577916215 5.5383914707519555 1.0924570061870607 8 83.72440812760846 3.0438580837956537 11.245775193695218 1.9859585949006688 9 79.03630470275208 4.535424451540906 13.014600717517933 3.4136701281890796 10 39.23703127621777 27.027374347801768 19.784012187683942 13.951582188296522 11 32.56916164395236 24.58577588617726 26.53091799148247 16.314144478387902 12 29.40684918007463 22.159758270499466 31.86762406747971 16.565768481946193 13 23.941101738928943 26.179350185505285 32.49079132053662 17.38875675502915 14 20.26042651567007 28.881495015460995 33.56839991370608 17.28967855516285 15 19.559621372126532 23.67416322867089 38.77879460183614 17.98742079736644 16 22.24884874860505 20.16880581471844 37.87131020265753 19.71103523401898 17 22.241191495255165 20.369958530979247 32.57069309462234 24.818156879143242 18 23.332782898889633 22.973491254750826 33.65695771331776 20.03676813304178 19 26.89307278252602 24.496818577695155 29.24391614575149 19.36619249402734 20 27.68836177392592 24.121213654680513 28.666292903923445 19.524131667470122 21 25.612313928743596 24.08552419558889 31.331816087423192 18.97034578824432 22 23.824578318387264 22.122271021490914 30.71277709269405 23.340373567427775 23 22.746503631535635 25.783436894910523 29.920284663387143 21.549774810166703 24 22.16095679711075 24.68298971131489 33.57665643036161 19.57939706121275 25 23.26886147962105 23.595193641949496 32.04980011239516 21.08614476603429 26 21.477397119807385 26.04791176713427 30.13382215463124 22.34086895842711 27 20.794103781750966 24.85397950785834 32.50144489041472 21.850471819975976 28 20.71686540013477 24.893064792348607 34.29470704014532 20.09536276737131 29 21.40974695108147 24.90025595201632 33.26617145322683 20.423825643675375 30 22.96809788500004 24.190595028511616 32.79175466959285 20.049552416895498 31 26.444157981787725 23.843155480862194 29.31516189431126 20.397524643038825 32 26.393154015996334 24.269697784856483 29.232130634073844 20.105017565073336 33 25.629958903854195 24.190461858888142 28.863850040350396 21.315729196907267 34 21.932903816907746 25.632023033018076 30.700259148087284 21.73481400198689 35 22.706486159681035 25.26846996092803 30.323255944026144 21.70178793536479 36 26.230354151296677 25.663317894534988 27.188709346643193 20.91761860752515 37 22.567789996830562 28.42046177898637 27.549465856640236 21.462282367542834 38 23.05938566189298 28.546506827606592 26.518866140557872 21.87524136994255 39 22.65634779644224 26.829018193633956 26.85771624749308 23.65691776243072 40 23.978189479067066 24.88587363268089 28.328175229917356 22.807761658334687 41 22.08158770151893 24.51033529447799 28.798530340035317 24.609546663967762 42 23.071237758382363 26.8178985300737 26.490967104439612 23.619896607104334 43 22.64576081137588 25.3755383382029 27.919277901033663 24.059422949387553 44 22.661408242134335 26.12335235883354 29.33333954791576 21.88189985111636 45 22.229672322824477 27.56484694815174 27.805684212208458 22.39979651681533 46 23.281845517909982 26.614415345402055 28.96306140984017 21.140677726847795 47 22.429759682097476 26.87256466051068 28.82290038113146 21.874775276260383 48 22.435419391095213 26.307059854418966 29.384743022577574 21.87277773190824 49 22.53602904163149 25.395913290594763 29.993061862616887 22.07499580515686 50 21.500368879857028 26.801651836009597 29.641760395886656 22.056218888246715 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 676.0 1 1540.5 2 2405.0 3 17002.5 4 31600.0 5 22286.0 6 12972.0 7 12847.5 8 12723.0 9 12522.0 10 12321.0 11 12150.5 12 11980.0 13 11452.0 14 10924.0 15 10504.0 16 10084.0 17 9559.0 18 9034.0 19 8751.0 20 8468.0 21 8687.0 22 8906.0 23 9570.0 24 10234.0 25 11497.5 26 12761.0 27 14723.5 28 16686.0 29 19059.5 30 21433.0 31 24571.0 32 27709.0 33 31412.0 34 35115.0 35 39149.5 36 43184.0 37 47975.5 38 52767.0 39 61106.0 40 69445.0 41 77902.5 42 86360.0 43 90098.5 44 93837.0 45 98222.0 46 102607.0 47 107648.0 48 112689.0 49 111451.0 50 110213.0 51 103209.0 52 96205.0 53 90360.5 54 84516.0 55 82401.5 56 80287.0 57 77359.0 58 74431.0 59 69553.5 60 64676.0 61 58591.5 62 52507.0 63 45966.5 64 39426.0 65 33456.5 66 27487.0 67 23810.5 68 20134.0 69 17638.0 70 15142.0 71 12378.5 72 9615.0 73 7481.0 74 5347.0 75 3995.0 76 2643.0 77 1981.5 78 1320.0 79 965.0 80 610.0 81 411.5 82 213.0 83 146.0 84 79.0 85 61.0 86 43.0 87 31.5 88 20.0 89 13.0 90 6.0 91 4.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1501844.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.72722955980822 #Duplication Level Percentage of deduplicated Percentage of total 1 68.34861629870959 23.05209472001828 2 8.75796518151359 5.907638043074328 3 4.7863947418726145 4.842955026689901 4 3.336887191219568 4.501758412537842 5 2.3598003823935945 3.9794764606156 6 1.8578078093394648 3.7595226278157936 7 1.5062976060746178 3.5562271601827753 8 1.2480631266971252 3.367496926339677 9 1.0104165210574343 3.0670694961054195 >10 6.695078532620485 39.21705145050852 >50 0.06542556451787016 1.421968627653777 >100 0.0241669440305862 1.5756692033765947 >500 0.00260623842214034 0.5831845172000645 >1k 2.3693076564912182E-4 0.36031501617636214 >5k 0.0 0.0 >10k+ 2.3693076564912182E-4 0.8075723117051045 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10106 0.6729061074252718 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4509 0.3002309161271077 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0043945975747148175 0.0 2 0.0 0.0 0.0 0.014781828205858931 0.0 3 0.0 0.0 0.0 0.024370041096145805 0.0 4 0.0 0.0 0.0 0.035423119844670954 0.0 5 0.0 0.0 0.0 0.060192669811245374 0.0 6 0.0 0.0 0.0 0.15913770005406686 0.0 7 0.0 0.0 0.0 0.2260554358508607 0.0 8 0.0 0.0 0.0 0.5590460793531152 0.0 9 0.0 0.0 0.0 0.7604651348608777 0.0 10 0.0 0.0 0.0 1.028735341353696 0.0 11 0.0 0.0 0.0 1.2024551151784073 0.0 12 0.0 0.0 0.0 1.3418837109579957 0.0 13 0.0 0.0 0.0 1.4145277405642662 0.0 14 0.0 0.0 0.0 1.454278873171914 0.0 15 0.0 0.0 0.0 1.4913000284982993 0.0 16 0.0 0.0 0.0 1.5526246401090926 0.0 17 0.0 0.0 0.0 1.6230713709280058 0.0 18 0.0 0.0 0.0 1.7313382748141617 0.0 19 0.0 0.0 0.0 1.7832078431581442 0.0 20 0.0 0.0 0.0 1.8441995307102468 0.0 21 0.0 0.0 0.0 1.9092528917783738 0.0 22 0.0 0.0 0.0 1.9852927467832877 0.0 23 0.0 0.0 0.0 2.0709208146784888 0.0 24 0.0 0.0 0.0 2.1372392871696393 0.0 25 0.0 0.0 0.0 2.1927710201592174 0.0 26 0.0 0.0 0.0 2.2474371505962005 0.0 27 0.0 0.0 0.0 2.3107593065591367 0.0 28 0.0 0.0 0.0 2.3756794980037874 0.0 29 0.0 0.0 0.0 2.4511866745147963 0.0 30 0.0 0.0 0.0 2.5531280212858327 0.0 31 0.0 0.0 0.0 2.631365175078104 0.0 32 0.0 0.0 0.0 2.717792260714162 0.0 33 0.0 0.0 0.0 2.8075485869371253 0.0 34 0.0 0.0 0.0 2.9002346448765652 0.0 35 0.0 0.0 0.0 3.0083017943275068 0.0 36 0.0 0.0 0.0 3.0950618040222553 0.0 37 0.0 0.0 0.0 3.1894124822551477 0.0 38 0.0 0.0 0.0 3.3125943839706387 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 2975 0.0 43.334454 1 CGTTTTA 6015 0.0 43.122192 1 GTTTTAT 6685 0.0 40.741962 2 AGGCGAT 1335 0.0 40.704117 7 TACGGGA 330 0.0 40.0 4 GTTATTT 3485 0.0 39.770447 2 CGTTTTT 2895 0.0 39.5924 1 GTACGGG 495 0.0 38.666668 3 CTACGGG 210 0.0 37.71429 3 ACGGGAC 200 0.0 37.399998 5 TTACTGG 2240 0.0 37.223213 40 GCAAGGA 1845 0.0 36.96477 4 TTACGGG 310 0.0 36.903225 3 GCTAACG 30 1.3012855E-4 36.666664 1 TCGAATA 30 1.3012855E-4 36.666664 1 AAGGCGA 790 0.0 36.48101 6 CGAAGGA 320 0.0 36.4375 4 ACAACGA 115 0.0 36.347828 13 GCGCGAC 945 0.0 36.317455 9 TACGGGG 715 0.0 36.307693 4 >>END_MODULE