##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545747_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 566673 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.939727144226037 31.0 31.0 33.0 30.0 33.0 2 31.116017526862937 31.0 31.0 33.0 30.0 34.0 3 31.0120369242932 31.0 31.0 34.0 28.0 34.0 4 34.99279478641121 35.0 35.0 37.0 32.0 37.0 5 32.739177620956 35.0 35.0 37.0 28.0 37.0 6 33.94783940650075 35.0 35.0 37.0 28.0 37.0 7 15.491593917479745 0.0 0.0 35.0 0.0 37.0 8 24.985947804112776 17.0 17.0 35.0 17.0 37.0 9 32.64951744656972 32.0 32.0 37.0 27.0 39.0 10 35.36781706557397 37.0 34.0 37.0 32.0 39.0 11 36.361908896312336 37.0 35.0 39.0 32.0 39.0 12 36.43544160388796 37.0 35.0 39.0 32.0 39.0 13 36.3580777626603 38.0 35.0 39.0 32.0 39.0 14 37.41109069957454 39.0 36.0 40.0 32.0 41.0 15 37.62439360971848 39.0 36.0 41.0 32.0 41.0 16 37.56042903049907 39.0 36.0 41.0 32.0 41.0 17 37.477730543011575 39.0 36.0 41.0 32.0 41.0 18 37.403989602469146 39.0 36.0 40.0 32.0 41.0 19 37.35200371289968 39.0 36.0 40.0 32.0 41.0 20 37.450946136484355 39.0 36.0 40.0 32.0 41.0 21 37.33507507857265 39.0 35.0 40.0 32.0 41.0 22 37.3471402378444 39.0 35.0 40.0 32.0 41.0 23 37.29878077833248 39.0 35.0 40.0 32.0 41.0 24 37.09676303617783 39.0 35.0 40.0 32.0 41.0 25 36.82874426697584 39.0 35.0 40.0 31.0 41.0 26 36.712252039536025 38.0 35.0 40.0 31.0 41.0 27 36.63873168476352 38.0 35.0 40.0 31.0 41.0 28 36.51386955086973 38.0 35.0 40.0 31.0 41.0 29 36.43984802522795 38.0 35.0 40.0 30.0 41.0 30 36.114540484547526 38.0 35.0 40.0 30.0 41.0 31 35.96688566421905 38.0 35.0 40.0 29.0 41.0 32 35.84486643972803 38.0 35.0 40.0 29.0 41.0 33 35.59126515644825 38.0 34.0 40.0 27.0 41.0 34 35.33481919907954 38.0 34.0 40.0 25.0 41.0 35 35.095485403398435 38.0 34.0 40.0 24.0 41.0 36 34.9081851438131 38.0 34.0 40.0 24.0 41.0 37 34.79099057128185 38.0 34.0 40.0 23.0 41.0 38 34.614511367225894 38.0 33.0 40.0 23.0 41.0 39 34.47471998842366 38.0 33.0 40.0 23.0 41.0 40 34.335419192373735 38.0 33.0 40.0 22.0 41.0 41 34.13242028471446 38.0 33.0 40.0 21.0 41.0 42 34.07673031889644 38.0 33.0 40.0 21.0 41.0 43 33.9870330861008 37.0 33.0 40.0 20.0 41.0 44 33.76126619761308 37.0 33.0 40.0 19.0 41.0 45 33.69517340688545 37.0 33.0 40.0 20.0 41.0 46 33.63857109832302 37.0 33.0 40.0 20.0 41.0 47 33.54582978190244 37.0 32.0 40.0 20.0 41.0 48 33.45947486469269 36.0 32.0 40.0 20.0 41.0 49 33.32193169605751 36.0 32.0 40.0 19.0 41.0 50 33.22394749705739 36.0 32.0 40.0 19.0 40.0 51 33.07368447058533 36.0 32.0 40.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 3.0 13 5.0 14 15.0 15 27.0 16 71.0 17 197.0 18 477.0 19 923.0 20 1449.0 21 2365.0 22 3580.0 23 5374.0 24 7476.0 25 9889.0 26 11621.0 27 12253.0 28 12817.0 29 13838.0 30 16581.0 31 20612.0 32 26733.0 33 37107.0 34 47443.0 35 55795.0 36 71652.0 37 104658.0 38 84469.0 39 19239.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.47266236436181 22.433043395397345 25.59253749516917 16.50175674507167 2 37.925576125913885 22.015342181469734 27.983863709758538 12.075217982857838 3 31.891584741111718 22.214751717480805 33.32715693177547 12.566506609632011 4 27.149343624983015 26.70252508942547 30.53065877499016 15.617472510601353 5 20.756591543976864 35.54519096551274 29.470082393196783 14.228135097313618 6 20.207950617022515 40.364372398190845 30.106428222272807 9.32124876251383 7 37.14276134560849 56.11066699842766 5.874110818761437 0.8724608372024079 8 84.50129086792559 3.3400214938774218 10.233415038302512 1.9252725998944717 9 79.74404991944208 4.7281236268535825 11.939690085816688 3.588136367887653 10 39.312619447194415 27.734160618204857 18.886906558103174 14.066313376497558 11 32.81945672371897 25.09966065085155 25.6786541797474 16.402228445682077 12 29.885665983733123 22.554277334547436 31.081417325335774 16.478639356383663 13 24.21802344562031 26.89522881803086 31.609764361457138 17.276983374891692 14 20.43577160019976 29.817196160748793 32.58051821773756 17.16651402131388 15 19.53419344136742 24.29655197971317 38.181808556257316 17.9874460226621 16 22.29645668666056 20.618946023544442 37.348170814561485 19.73642647523351 17 22.112223451620245 20.77070903325198 31.861761545018023 25.25530597010975 18 23.483208128850325 23.349268449352625 33.12421802344562 20.04330539835143 19 27.258577698249255 24.818546145660726 28.475858210996464 19.447017945093556 20 28.050745315199414 24.586666384316878 27.792395261464726 19.570193039018978 21 25.788947064709276 24.729958900459348 30.467835947715876 19.0132580871155 22 23.752322768157295 22.52445413845375 30.08719314313546 23.636029950253498 23 22.83256834188324 26.513350733138864 29.054851739892317 21.599229185085576 24 22.1626934757788 25.259011811044463 33.04286599149774 19.535428721678993 25 23.271622258339466 24.184670877207843 31.416354758387993 21.1273521060647 26 21.476936434239853 26.759524452373768 29.43020048599457 22.33333862739181 27 20.883119541605122 25.567831888937715 31.657057950528788 21.89199061892838 28 20.57924058495817 25.65747794583472 33.79850460494853 19.964776864258578 29 21.398407900147 25.583890532988164 32.71039911906867 20.30730244779617 30 22.9029793196429 24.882427784630643 32.25811005641702 19.95648283930944 31 26.696701625099482 24.38619803661018 28.52050477082903 20.396595567461304 32 26.72176016856282 24.617371923490268 28.57185713806728 20.089010769879632 33 25.939474794105244 24.578901765215566 28.16350876078444 21.318114679894755 34 22.038812507389625 25.861475665860205 30.163956991068925 21.935754835681248 35 22.736392946196485 25.373539942788874 30.072193310780644 21.817873800233997 36 26.415763588524598 26.081355561320198 26.799229890960042 20.703650959195162 37 22.556042020706826 29.050440024493845 27.040462488948652 21.353055465850677 38 22.91692034030208 29.110086416681224 26.032297286089157 21.940695956927538 39 22.562924296728447 27.39675262452949 26.466233612683155 23.574089466058908 40 23.987202495972106 25.237129702668028 27.98545192730199 22.79021587405788 41 21.964519220079303 24.866192671964253 28.37138879036058 24.797899317595864 42 22.992801845155846 27.023345033202574 25.953768751996304 24.03008436964528 43 22.447690290520285 25.603831486589268 27.639573440061554 24.308904782828897 44 22.581100564170164 26.26947110591117 29.148733043571866 22.0006952863468 45 22.21545759194456 28.014392780315983 27.487633961738073 22.28251566600138 46 23.351562541359833 27.23687205848876 28.44656442075059 20.96500097940082 47 22.40445547961523 27.34045913604495 28.190861396254984 22.064223988084837 48 22.31092711316756 26.68187826136061 29.146438951564658 21.86075567390717 49 22.469748867512656 25.840652369179402 29.826725466009496 21.862873297298442 50 21.476583497007976 27.46928122568042 29.1249097804201 21.929225496891505 51 21.89957876941375 28.14533249334272 28.16139113739317 21.793697599850354 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 278.0 1 597.5 2 917.0 3 5306.5 4 9696.0 5 6979.5 6 4263.0 7 4147.5 8 4032.0 9 4051.0 10 4070.0 11 3989.5 12 3909.0 13 3776.0 14 3643.0 15 3584.0 16 3525.0 17 3371.5 18 3218.0 19 3130.5 20 3043.0 21 3112.5 22 3182.0 23 3419.5 24 3657.0 25 4146.0 26 5255.0 27 5875.0 28 6687.0 29 7499.0 30 8662.0 31 9825.0 32 11305.5 33 12786.0 34 14265.0 35 15744.0 36 17424.5 37 19105.0 38 21623.0 39 24141.0 40 27692.5 41 31244.0 42 32963.0 43 34682.0 44 35815.0 45 36948.0 46 38374.0 47 39800.0 48 40240.0 49 40680.0 50 39709.5 51 38739.0 52 36498.5 53 34258.0 54 32761.5 55 31265.0 56 30130.5 57 28996.0 58 27343.5 59 25691.0 60 23412.0 61 21133.0 62 18978.0 63 16823.0 64 14612.5 65 12402.0 66 10560.0 67 8718.0 68 7602.0 69 6486.0 70 5733.5 71 4981.0 72 4160.5 73 3340.0 74 2572.5 75 1308.5 76 812.0 77 633.5 78 455.0 79 332.5 80 210.0 81 151.5 82 93.0 83 60.0 84 27.0 85 25.5 86 24.0 87 16.5 88 9.0 89 5.5 90 2.0 91 2.5 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 566673.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.69333160998995 #Duplication Level Percentage of deduplicated Percentage of total 1 67.30317768056568 30.753064161641618 2 11.416395312007944 10.433062735646272 3 6.312135710108735 8.652675305077736 4 4.124126846863571 7.537803824615976 5 2.795876357871459 6.387645278037573 6 2.031700752506445 5.570110572992586 7 1.5475964562661897 4.950038665223142 8 1.0784114506384224 3.9420969620825392 9 0.8337371624160147 3.4286605774062306 >10 2.520636167670387 15.533658993987187 >50 0.021644953068644703 0.6951981885259614 >100 0.013774060826466202 1.2143490196189008 >500 0.0 0.0 >1k 7.870891900837826E-4 0.9016357151442568 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2598 0.4584654642095177 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2416 0.42634817610861997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00635287017380394 0.0 2 0.0 0.0 0.0 0.018705673289533823 0.0 3 0.0 0.0 0.0 0.027882041318361736 0.0 4 0.0 0.0 0.0 0.03776428381094564 0.0 5 0.0 0.0 0.0 0.06670513682494136 0.0 6 0.0 0.0 0.0 0.13252793057018775 0.0 7 0.0 0.0 0.0 0.1706451516130114 0.0 8 0.0 0.0 0.0 0.46075955621672465 0.0 9 0.0 0.0 0.0 0.6271694610472001 0.0 10 0.0 0.0 0.0 0.8684020590358108 0.0 11 0.0 0.0 0.0 1.0120475124101553 0.0 12 0.0 0.0 0.0 1.1233992090676634 0.0 13 0.0 0.0 0.0 1.1841044129506788 0.0 14 0.0 0.0 0.0 1.2160452324356374 0.0 15 0.0 0.0 0.0 1.247986051920596 0.0 16 0.0 0.0 0.0 1.3016325111660516 0.0 17 0.0 0.0 0.0 1.367631773527237 0.0 18 0.0 0.0 0.0 1.4645130436777472 0.0 19 0.0 0.0 0.0 1.5103948838218868 0.0 20 0.0 0.0 0.0 1.5619237196760742 0.0 21 0.0 0.0 0.0 1.6250994841822357 0.0 22 0.0 0.0 0.0 1.688275248688397 0.0 23 0.0 0.0 0.0 1.7662743769334344 0.0 24 0.0 0.0 0.0 1.8257443005048768 0.0 25 0.0 0.0 0.0 1.8765672618953082 0.0 26 0.0 0.0 0.0 1.9298607839088857 0.0 27 0.0 0.0 0.0 1.9865072096253042 0.0 28 0.0 0.0 0.0 2.0410360119504545 0.0 29 0.0 0.0 0.0 2.105094119536311 0.0 30 0.0 0.0 0.0 2.2049753561577843 0.0 31 0.0 0.0 0.0 2.2803274551637362 0.0 32 0.0 0.0 0.0 2.357973646176896 0.0 33 0.0 0.0 0.0 2.437913929197262 0.0 34 0.0 0.0 0.0 2.518383618065445 0.0 35 0.0 0.0 0.0 2.6152648882159553 0.0 36 0.0 0.0 0.0 2.6976757318594675 0.0 37 0.0 0.0 0.0 2.7889100062999295 0.0 38 0.0 0.0 0.0 2.9006146401893154 0.0 39 0.0 0.0 0.0 3.0968477411134816 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 30 2.163546E-6 45.000004 2 CGTTAAG 20 7.030255E-4 45.000004 2 CTTGCGG 20 7.030255E-4 45.000004 2 CATACGA 70 0.0 45.0 18 CGTTTTA 1365 0.0 44.67033 1 CGTTATT 300 0.0 42.75 1 CGTTTTT 1910 0.0 42.40838 1 TTCGAAT 75 0.0 42.0 16 AGGCGAT 450 0.0 41.5 7 GTTTTAT 1605 0.0 40.654205 2 CGTTCGA 80 0.0 39.375004 14 GCAAGGA 735 0.0 38.87755 4 GACCGAT 215 0.0 38.720932 9 GACACGA 70 0.0 38.571426 25 CGTAAAT 35 6.2426843E-6 38.571426 16 CGTTTAG 35 6.2426843E-6 38.571426 2 AGGTACC 170 0.0 38.382355 7 CGTTGAT 65 9.094947E-12 38.07692 25 GTAAGGC 95 0.0 37.894737 4 TTGCGGA 30 1.1391914E-4 37.500004 1 >>END_MODULE