##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545745_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 706299 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.96145400177545 31.0 31.0 33.0 30.0 33.0 2 31.127278956929008 31.0 31.0 33.0 30.0 34.0 3 31.020263372877494 31.0 31.0 34.0 28.0 34.0 4 34.99419367718205 35.0 35.0 37.0 32.0 37.0 5 32.705504326071534 35.0 35.0 37.0 28.0 37.0 6 33.92628617625113 35.0 35.0 37.0 28.0 37.0 7 15.778667391572125 0.0 0.0 35.0 0.0 37.0 8 25.16104794145256 17.0 17.0 35.0 17.0 37.0 9 32.73644164865022 32.0 32.0 37.0 27.0 39.0 10 35.37718303438062 37.0 34.0 37.0 32.0 39.0 11 36.31047191062142 37.0 35.0 39.0 32.0 39.0 12 36.436353442380636 37.0 35.0 39.0 32.0 39.0 13 36.43063631691394 38.0 35.0 39.0 32.0 39.0 14 37.53551682785902 39.0 36.0 40.0 32.0 41.0 15 37.752604775031536 39.0 36.0 41.0 33.0 41.0 16 37.68332958138126 39.0 36.0 41.0 33.0 41.0 17 37.5974523537482 39.0 36.0 41.0 32.0 41.0 18 37.48454266535844 39.0 36.0 40.0 32.0 41.0 19 37.46796753216414 39.0 36.0 40.0 32.0 41.0 20 37.57616675090861 39.0 36.0 41.0 32.0 41.0 21 37.46173362839251 39.0 36.0 41.0 32.0 41.0 22 37.47778348829603 39.0 36.0 41.0 32.0 41.0 23 37.436931101417386 39.0 35.0 41.0 32.0 41.0 24 37.25139211580365 39.0 35.0 41.0 32.0 41.0 25 36.977079112387244 39.0 35.0 40.0 31.0 41.0 26 36.87457153415197 39.0 35.0 40.0 31.0 41.0 27 36.83315847820824 39.0 35.0 40.0 31.0 41.0 28 36.71197892110848 39.0 35.0 40.0 31.0 41.0 29 36.70435183965997 39.0 35.0 40.0 31.0 41.0 30 36.39110065283966 38.0 35.0 40.0 30.0 41.0 31 36.28346351899125 38.0 35.0 40.0 30.0 41.0 32 36.16650880151324 38.0 35.0 40.0 30.0 41.0 33 35.92042463602525 38.0 35.0 40.0 29.0 41.0 34 35.73220548238069 38.0 35.0 40.0 27.0 41.0 35 35.52525913246373 38.0 35.0 40.0 26.0 41.0 36 35.33517249776653 38.0 34.0 40.0 25.0 41.0 37 35.246467855681516 38.0 34.0 40.0 25.0 41.0 38 35.13343215833521 38.0 34.0 40.0 24.0 41.0 39 35.01787486602699 38.0 34.0 40.0 24.0 41.0 40 34.88460835991556 38.0 34.0 40.0 23.0 41.0 41 34.73823267483035 38.0 34.0 40.0 23.0 41.0 42 34.68085187717949 38.0 34.0 40.0 23.0 41.0 43 34.60837973719345 38.0 34.0 40.0 23.0 41.0 44 34.420105366140966 38.0 33.0 40.0 22.0 41.0 45 34.366295294202594 38.0 33.0 40.0 22.0 41.0 46 34.293057189660466 38.0 33.0 40.0 22.0 41.0 47 34.22660941046214 38.0 33.0 40.0 22.0 41.0 48 34.146704157870815 38.0 33.0 40.0 22.0 41.0 49 34.03499650997665 37.0 33.0 40.0 21.0 41.0 50 33.93498787340772 37.0 33.0 40.0 20.0 41.0 51 33.78905392758591 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 16.0 15 41.0 16 75.0 17 218.0 18 443.0 19 902.0 20 1600.0 21 2555.0 22 3905.0 23 5923.0 24 8396.0 25 11242.0 26 13062.0 27 13531.0 28 14143.0 29 15782.0 30 18850.0 31 24151.0 32 31326.0 33 43597.0 34 56177.0 35 67583.0 36 87448.0 37 135989.0 38 120265.0 39 29075.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.949078223245394 22.90078281294466 27.252764056015938 15.897374907794006 2 35.45226596667984 23.035569921520487 29.2567312144007 12.255432897398977 3 30.174331267635946 22.817673534862713 34.45495462969649 12.553040567804855 4 26.227985598167347 27.324546686318403 31.712348452992288 14.735119262521962 5 20.542857911451097 36.322294099241255 30.01689086350115 13.117957125806493 6 19.92201603003827 40.98816506890142 29.320443608160286 9.769375292900033 7 38.507204455903235 55.23836222336433 5.493424173048525 0.7610091476839129 8 85.98794561510068 3.116243970329846 9.1114386400094 1.784371774560066 9 80.48701753789825 5.950595994047847 10.757200562368062 2.8051859056858355 10 35.72368076409566 36.7200010193983 17.207018557296553 10.349299659209485 11 29.548817144014077 25.25998196231341 30.45947962548439 14.731721268188119 12 28.461458957183854 24.422801108312488 31.668740859041282 15.446999075462376 13 21.960954213442182 30.171782771885564 31.339560157950103 16.527702856722154 14 17.934047761642024 33.306574127954306 31.85732954456965 16.902048565834015 15 17.387961755573773 27.24214532372267 39.58974881742718 15.780144103276376 16 19.619452951228872 24.94042891183479 38.311395032415454 17.12872310452089 17 20.44799723629794 24.169084198052097 31.681341754695957 23.701576810954002 18 21.02084244774522 25.890026745047066 34.17263793379291 18.9164928734148 19 24.856894884461113 26.172485024047887 29.96903577663284 19.001584314858157 20 26.56721869916282 25.845852818707094 29.68417058497888 17.902757897151204 21 23.61620220331616 26.91905269581296 31.40213988693174 18.06260521393914 22 22.094183907948334 25.315340953335625 30.93250875337499 21.65796638534105 23 20.29225582933007 28.27173760687754 30.94029582372338 20.495710740069008 24 19.594675909211254 26.31505920297211 35.783995163521396 18.306269724295234 25 19.56466029259563 27.788939245277145 33.111331036855496 19.535069425271733 26 19.13778725440642 30.878424010227963 30.693516485227928 19.29027225013769 27 19.58235817975107 29.64339465297275 31.739532407663045 19.034714759613138 28 17.7969953235103 28.445460067195338 35.26750002477704 18.490044584517324 29 18.890158417327505 26.084278754465178 34.72821000737648 20.297352820830838 30 19.624408359632394 28.42351468712259 32.61451594862799 19.337561004617022 31 23.01631462029537 27.951335057815456 29.711496122746883 19.32085419914229 32 24.003573557374427 27.592846655594865 29.825895265319645 18.57768452171106 33 22.727909851210324 28.294390902436504 29.855769298838027 19.121929947515145 34 20.190882331703712 27.49388007062165 31.13114983880764 21.184087758866994 35 20.30754680383237 27.110189877091713 31.5679336938039 21.014329625272016 36 23.119103948894164 28.11939419424351 29.38443916811435 19.377062688747966 37 20.642815578105022 30.19910830965356 29.8159844485126 19.342091663728816 38 20.03740625429174 30.53720874587108 29.194434651613555 20.23095034822363 39 20.871047530861574 29.848406977781366 29.014482535017038 20.26606295634002 40 21.974404607680317 27.93533616782694 29.54839239472235 20.541866829770395 41 19.507460721309247 28.023684020506895 29.03741899677049 23.431436261413367 42 20.984597174850876 28.347909313194553 27.879977176804726 22.787516335149842 43 21.32099861390148 28.247810063443385 28.417568197038364 22.01362312561677 44 20.57188244638602 29.658260878183317 28.977387763539237 20.792468911891422 45 19.40339714483526 31.18098708903736 27.83028150967225 21.585334256455127 46 20.985305090337096 30.744911149527326 28.390101076173124 19.879682683962457 47 20.903470060130342 28.71914019416706 29.05879804445426 21.318591701248337 48 20.942405411872308 27.174893352532003 30.45183413823324 21.430867097362448 49 20.632338428909 27.184379420047318 30.98093017263227 21.20235197841141 50 19.489762834153808 30.14474040031205 29.51228870492525 20.853208060608893 51 19.345631241159904 30.18863116045754 28.59199857284238 21.873739025540175 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 309.0 1 526.0 2 743.0 3 5240.0 4 9737.0 5 7270.5 6 4804.0 7 4814.0 8 4824.0 9 4819.0 10 4814.0 11 4837.0 12 4860.0 13 4702.5 14 4545.0 15 4462.5 16 4380.0 17 4365.0 18 4350.0 19 4291.5 20 4233.0 21 4561.5 22 4890.0 23 5400.5 24 5911.0 25 6909.0 26 9500.0 27 11093.0 28 12929.0 29 14765.0 30 17042.5 31 19320.0 32 21773.0 33 24226.0 34 26823.5 35 29421.0 36 31866.5 37 34312.0 38 37989.0 39 41666.0 40 45937.0 41 50208.0 42 53257.5 43 56307.0 44 56680.0 45 57053.0 46 57210.5 47 57368.0 48 54728.5 49 52089.0 50 48451.5 51 44814.0 52 40521.5 53 36229.0 54 33258.5 55 30288.0 56 27160.5 57 24033.0 58 21386.0 59 18739.0 60 16392.5 61 14046.0 62 11558.5 63 9071.0 64 7296.0 65 5521.0 66 4395.5 67 3270.0 68 2732.5 69 2195.0 70 1918.0 71 1641.0 72 1333.5 73 1026.0 74 810.5 75 466.0 76 337.0 77 270.0 78 203.0 79 146.0 80 89.0 81 65.0 82 41.0 83 27.5 84 14.0 85 10.0 86 6.0 87 5.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 706299.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.8355204470559 #Duplication Level Percentage of deduplicated Percentage of total 1 67.52402443491536 27.57378680479488 2 9.770009355930622 7.979268336440646 3 5.520595330663886 6.763091505157391 4 3.74271546901861 6.113429362504873 5 2.8024050075411298 5.721883349318882 6 2.138795508499627 5.24032966316447 7 1.6628445010365798 4.7532184435647595 8 1.307132988707084 4.270196470989553 9 1.0654616696569932 3.9157813617149215 >10 4.445318221079515 26.225774203752593 >50 0.01641527160377851 0.41603934135626636 >100 0.003211681010112348 0.18127936439327974 >500 3.5685344556775253E-4 0.10535770133139953 >1k 7.137068911355051E-4 0.7405640915161443 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2731 0.38666343857204954 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2351 0.3328618616195124 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 723 0.10236457930706401 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01585730689127409 0.0 2 0.0 0.0 0.0 0.06838463596861952 0.0 3 0.0 0.0 0.0 0.09033001604136492 0.0 4 0.0 0.0 0.0 0.12317729460186125 0.0 5 0.0 0.0 0.0 0.20954298392040765 0.0 6 0.0 0.0 0.0 0.3405073488706624 0.0 7 0.0 0.0 0.0 0.41568797350697084 0.0 8 0.0 0.0 0.0 0.8650727241578992 0.0 9 0.0 0.0 0.0 1.0587584011870328 0.0 10 0.0 0.0 0.0 1.3519769955783598 0.0 11 0.0 0.0 0.0 1.5858722722246528 0.0 12 0.0 0.0 0.0 1.7855044393380142 0.0 13 0.0 0.0 0.0 1.887585852450591 0.0 14 0.0 0.0 0.0 1.9355825224161438 0.0 15 0.0 0.0 0.0 1.9902335979521422 0.0 16 0.0 0.0 0.0 2.1067564869835578 0.0 17 0.0 0.0 0.0 2.256268237672714 0.0 18 0.0 0.0 0.0 2.4631211427454947 0.0 19 0.0 0.0 0.0 2.5681758009001854 0.0 20 0.0 0.0 0.0 2.677336368874938 0.0 21 0.0 0.0 0.0 2.806601736658271 0.0 22 0.0 0.0 0.0 2.952998659208069 0.0 23 0.0 0.0 0.0 3.10916481546767 0.0 24 0.0 0.0 0.0 3.229793614319148 0.0 25 0.0 0.0 0.0 3.330176030264803 0.0 26 0.0 0.0 0.0 3.4390534320450685 0.0 27 0.0 0.0 0.0 3.545807087366682 0.0 28 0.0 0.0 0.0 3.658082483480792 0.0 29 0.0 0.0 0.0 3.7838082738330368 0.0 30 0.0 0.0 0.0 3.9503099961914145 0.0 31 0.0 0.0 0.0 4.0924594258239075 0.0 32 0.0 0.0 0.0 4.223706956968649 0.0 33 0.0 0.0 0.0 4.352405992363008 0.0 34 0.0 0.0 0.0 4.492290092439604 0.0 35 0.0 0.0 0.0 4.640810761448055 0.0 36 0.0 0.0 0.0 4.7831017741777915 0.0 37 0.0 0.0 0.0 4.919871046115031 0.0 38 0.0 0.0 0.0 5.063011557428228 0.0 39 1.415830972435187E-4 0.0 0.0 5.2149302207705235 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTACCG 20 7.031436E-4 45.000004 43 CGCGAAG 40 6.8084773E-9 45.000004 2 TCGATAG 40 6.8084773E-9 45.000004 2 GCGTAAA 20 7.031436E-4 45.000004 1 GTACGAA 20 7.031436E-4 45.000004 1 GCGCGAA 25 3.889273E-5 45.0 1 CGTTTTA 1635 0.0 43.623856 1 CGTTATT 350 0.0 42.42857 1 CGTTTTT 2425 0.0 42.216496 1 AGGCGAT 535 0.0 41.635517 7 GCGATAT 60 3.6379788E-12 41.249996 9 GACGGTC 55 6.002665E-11 40.909092 29 ATAGCGG 45 1.9264917E-8 40.0 2 TCGTCCC 90 0.0 40.0 38 TATACGG 45 1.9264917E-8 40.0 2 TAAGGAT 640 0.0 39.375004 5 TCGAGGA 40 3.455698E-7 39.375004 4 GTTTTAT 1940 0.0 38.621136 2 GGCGATA 315 0.0 38.57143 8 ATTAGCG 35 6.2448707E-6 38.571426 1 >>END_MODULE